RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 JPH4Q96JJ6 628 aa24.31■■□□□ 1.48
CLCN6-203ENST00000376490 PRG4Q92954 1404 aaPredicted RBP24.26■■□□□ 1.47
CLCN6-203ENST00000376490 KIAA0586Q9BVV6 1533 aa24.23■■□□□ 1.47
CLCN6-203ENST00000376490 RAPGEF2Q9Y4G8 1499 aa24.15■■□□□ 1.46
CLCN6-203ENST00000376490 TRHP20396 242 aaPredicted RBP24.15■■□□□ 1.46
CLCN6-203ENST00000376490 IQGAP2Q13576 1575 aa24.08■■□□□ 1.44
CLCN6-203ENST00000376490 CTTNBP2Q8WZ74 1663 aa24■■□□□ 1.43
CLCN6-203ENST00000376490 PRXQ9BXM0 1461 aa24■■□□□ 1.43
CLCN6-203ENST00000376490 CSRNP3Q8WYN3 585 aa23.99■■□□□ 1.43
CLCN6-203ENST00000376490 TTBK1Q5TCY1 1321 aaPredicted RBP23.97■■□□□ 1.43
CLCN6-203ENST00000376490 CARMIL2Q6F5E8 1435 aa23.97■■□□□ 1.43
CLCN6-203ENST00000376490 CHIC1Q5VXU3 224 aa23.96■■□□□ 1.43
CLCN6-203ENST00000376490 PTPRGP23470 1445 aa23.93■■□□□ 1.42
CLCN6-203ENST00000376490 ADCY10Q96PN6 1610 aa23.93■■□□□ 1.42
CLCN6-203ENST00000376490 DISP1Q96F81 1524 aa23.93■■□□□ 1.42
CLCN6-203ENST00000376490 FAM9AQ8IZU1 332 aaPredicted RBP23.92■■□□□ 1.42
CLCN6-203ENST00000376490 UGGT2Q9NYU1 1516 aa23.92■■□□□ 1.42
CLCN6-203ENST00000376490 TNIKQ9UKE5 1360 aa23.91■■□□□ 1.42
CLCN6-203ENST00000376490 NPM1P06748 294 aaKnown RBP eCLIP23.89■■□□□ 1.41
CLCN6-203ENST00000376490 EEA1Q15075 1411 aa23.88■■□□□ 1.41
CLCN6-203ENST00000376490 KIAA0556O60303 1618 aa23.84■■□□□ 1.41
CLCN6-203ENST00000376490 KIF13AQ9H1H9 1805 aa23.84■■□□□ 1.41
CLCN6-203ENST00000376490 MAPKBP1O60336 1514 aa23.77■■□□□ 1.4
CLCN6-203ENST00000376490 UACAQ9BZF9 1416 aa23.76■■□□□ 1.39
CLCN6-203ENST00000376490 GOLGA3Q08378 1498 aa23.75■■□□□ 1.39
CLCN6-203ENST00000376490 UHRF1BP1LA0JNW5 1464 aa23.73■■□□□ 1.39
CLCN6-203ENST00000376490 ABCC2Q92887 1545 aa23.72■■□□□ 1.39
CLCN6-203ENST00000376490 FAM69CQ0P6D2 419 aa23.71■■□□□ 1.39
CLCN6-203ENST00000376490 KIF21BO75037 1637 aa23.7■■□□□ 1.39
CLCN6-203ENST00000376490 ABCC10Q5T3U5 1492 aa23.7■■□□□ 1.38
CLCN6-203ENST00000376490 P3H3Q8IVL6 736 aa23.7■■□□□ 1.38
CLCN6-203ENST00000376490 DIP2BQ9P265 1576 aa23.67■■□□□ 1.38
CLCN6-203ENST00000376490 RANGAP1P46060 587 aaPredicted RBP23.66■■□□□ 1.38
CLCN6-203ENST00000376490 EHMT2Q96KQ7 1210 aa23.66■■□□□ 1.38
CLCN6-203ENST00000376490 PLB1Q6P1J6 1458 aa23.65■■□□□ 1.38
CLCN6-203ENST00000376490 ZCCHC11Q5TAX3 1644 aaKnown RBP23.63■■□□□ 1.37
CLCN6-203ENST00000376490 TSPOAP1O95153 1857 aa23.63■■□□□ 1.37
CLCN6-203ENST00000376490 KDM5BQ9UGL1 1544 aa23.63■■□□□ 1.37
CLCN6-203ENST00000376490 SAMD9Q5K651 1589 aa23.62■■□□□ 1.37
CLCN6-203ENST00000376490 ASXL2Q76L83 1435 aa23.62■■□□□ 1.37
CLCN6-203ENST00000376490 ABCA8O94911 1581 aa23.61■■□□□ 1.37
CLCN6-203ENST00000376490 UBTFP17480 764 aaKnown RBP23.56■■□□□ 1.36
CLCN6-203ENST00000376490 GLI2P10070 1586 aa23.49■■□□□ 1.35
CLCN6-203ENST00000376490 ARID3CA6NKF2 412 aa23.48■■□□□ 1.35
CLCN6-203ENST00000376490 FHOD3Q2V2M9 1422 aa23.48■■□□□ 1.35
CLCN6-203ENST00000376490 EPRSP07814 1512 aaKnown RBP23.47■■□□□ 1.35
CLCN6-203ENST00000376490 RAPGEF6Q8TEU7 1601 aa23.46■■□□□ 1.35
CLCN6-203ENST00000376490 PPRC1Q5VV67 1664 aaKnown RBP23.44■■□□□ 1.34
CLCN6-203ENST00000376490 EFCAB5A4FU69 1503 aa23.43■■□□□ 1.34
CLCN6-203ENST00000376490 WDR7Q9Y4E6 1490 aa23.43■■□□□ 1.34
CLCN6-203ENST00000376490 ATP10BO94823 1461 aa23.43■■□□□ 1.34
CLCN6-203ENST00000376490 KCNH8Q96L42 1107 aa23.42■■□□□ 1.34
CLCN6-203ENST00000376490 MAP3K4Q9Y6R4 1608 aa23.41■■□□□ 1.34
CLCN6-203ENST00000376490 KDM6BO15054 1643 aa23.37■■□□□ 1.33
CLCN6-203ENST00000376490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.35■■□□□ 1.33
CLCN6-203ENST00000376490 HNRNPUL2Q1KMD3 747 aaKnown RBP23.35■■□□□ 1.33
CLCN6-203ENST00000376490 NUP153P49790 1475 aaKnown RBP23.35■■□□□ 1.33
CLCN6-203ENST00000376490 ARHGAP35Q9NRY4 1499 aa23.33■■□□□ 1.33
CLCN6-203ENST00000376490 CFAP43Q8NDM7 1665 aa23.32■■□□□ 1.32
CLCN6-203ENST00000376490 CD109Q6YHK3 1445 aa23.27■■□□□ 1.32
CLCN6-203ENST00000376490 TEX14Q8IWB6 1497 aa23.25■■□□□ 1.31
CLCN6-203ENST00000376490 ATP1B4Q9UN42 357 aaPredicted RBP23.24■■□□□ 1.31
CLCN6-203ENST00000376490 FMN1Q68DA7 1419 aa23.23■■□□□ 1.31
CLCN6-203ENST00000376490 PLEKHD1A6NEE1 506 aa23.22■■□□□ 1.31
CLCN6-203ENST00000376490 COL17A1Q9UMD9 1497 aaPredicted RBP23.22■■□□□ 1.31
CLCN6-203ENST00000376490 MAGI3Q5TCQ9 1506 aa23.21■■□□□ 1.31
CLCN6-203ENST00000376490 ABCA9Q8IUA7 1624 aa23.21■■□□□ 1.31
CLCN6-203ENST00000376490 CDK13Q14004 1512 aaKnown RBP23.19■■□□□ 1.3
CLCN6-203ENST00000376490 HECW1Q76N89 1606 aa23.16■■□□□ 1.3
CLCN6-203ENST00000376490 LRRIQ1Q96JM4 1722 aa23.16■■□□□ 1.3
CLCN6-203ENST00000376490 CLIP1P30622 1438 aa23.12■■□□□ 1.29
CLCN6-203ENST00000376490 AEBP2Q6ZN18 517 aaPredicted RBP23.08■■□□□ 1.29
CLCN6-203ENST00000376490 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.08■■□□□ 1.28
CLCN6-203ENST00000376490 PCF11O94913 1555 aaKnown RBP23.06■■□□□ 1.28
CLCN6-203ENST00000376490 LOC105371045A0A1W2PR82 267 aa23.05■■□□□ 1.28
CLCN6-203ENST00000376490 CDK11AQ9UQ88 783 aaPredicted RBP23.04■■□□□ 1.28
CLCN6-203ENST00000376490 CASKIN1Q8WXD9 1431 aa23.04■■□□□ 1.28
CLCN6-203ENST00000376490 TTC37Q6PGP7 1564 aa23.04■■□□□ 1.28
CLCN6-203ENST00000376490 ARAP3Q8WWN8 1544 aa23.03■■□□□ 1.28
CLCN6-203ENST00000376490 PHLDB1Q86UU1 1377 aa23.01■■□□□ 1.27
CLCN6-203ENST00000376490 NEO1Q92859 1461 aa23■■□□□ 1.27
CLCN6-203ENST00000376490 KIF14Q15058 1648 aa22.97■■□□□ 1.27
CLCN6-203ENST00000376490 KDM4FA0A1W2PPD8 638 aa22.96■■□□□ 1.27
CLCN6-203ENST00000376490 RAPGEF3O95398 923 aa22.96■■□□□ 1.27
CLCN6-203ENST00000376490 TROQ12816 1431 aaPredicted RBP22.96■■□□□ 1.27
CLCN6-203ENST00000376490 CEP162Q5TB80 1403 aa22.96■■□□□ 1.27
CLCN6-203ENST00000376490 FYCO1Q9BQS8 1478 aa22.96■■□□□ 1.27
CLCN6-203ENST00000376490 CCDC18Q5T9S5 1454 aa22.95■■□□□ 1.26
CLCN6-203ENST00000376490 MYO5CQ9NQX4 1742 aa22.95■■□□□ 1.26
CLCN6-203ENST00000376490 FANCAO15360 1455 aa22.94■■□□□ 1.26
CLCN6-203ENST00000376490 AKNAQ7Z591 1439 aa22.93■■□□□ 1.26
CLCN6-203ENST00000376490 CFAP74Q9C0B2 1584 aa22.92■■□□□ 1.26
CLCN6-203ENST00000376490 PLCH2O75038 1416 aa22.91■■□□□ 1.26
CLCN6-203ENST00000376490 FRMPD1Q5SYB0 1578 aa22.89■■□□□ 1.25
CLCN6-203ENST00000376490 RICTORQ6R327 1708 aa22.88■■□□□ 1.25
CLCN6-203ENST00000376490 DENND4BO75064 1496 aaPredicted RBP22.85■■□□□ 1.25
CLCN6-203ENST00000376490 CDC42BPBQ9Y5S2 1711 aa22.85■■□□□ 1.25
CLCN6-203ENST00000376490 EFCAB2Q5VUJ9 269 aa22.85■■□□□ 1.25
CLCN6-203ENST00000376490 ADGRL1O94910 1474 aa22.85■■□□□ 1.25
CLCN6-203ENST00000376490 SCAPERQ9BY12 1400 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms