RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 ERCC6L2Q5T890 1561 aa34.48■■■■□ 3.11
HLA-C-201ENST00000376228 CARMIL1Q5VZK9 1371 aa34.48■■■■□ 3.11
HLA-C-201ENST00000376228 LOC105371045A0A1W2PR82 267 aa34.4■■■■□ 3.1
HLA-C-201ENST00000376228 FAM9AQ8IZU1 332 aaPredicted RBP34.4■■■■□ 3.1
HLA-C-201ENST00000376228 PRG4Q92954 1404 aaPredicted RBP34.31■■■■□ 3.08
HLA-C-201ENST00000376228 JPH4Q96JJ6 628 aa34.3■■■■□ 3.08
HLA-C-201ENST00000376228 KIAA0586Q9BVV6 1533 aa34.3■■■■□ 3.08
HLA-C-201ENST00000376228 RAPGEF2Q9Y4G8 1499 aa34.27■■■■□ 3.08
HLA-C-201ENST00000376228 CSRNP3Q8WYN3 585 aa34.21■■■■□ 3.07
HLA-C-201ENST00000376228 IQGAP2Q13576 1575 aa34.15■■■■□ 3.06
HLA-C-201ENST00000376228 PRXQ9BXM0 1461 aa34.1■■■■□ 3.05
HLA-C-201ENST00000376228 CTTNBP2Q8WZ74 1663 aa34.08■■■■□ 3.05
HLA-C-201ENST00000376228 KIF21BO75037 1637 aa34.05■■■■□ 3.04
HLA-C-201ENST00000376228 GOLGA3Q08378 1498 aa33.96■■■■□ 3.03
HLA-C-201ENST00000376228 TRHP20396 242 aaPredicted RBP33.94■■■■□ 3.02
HLA-C-201ENST00000376228 CARMIL2Q6F5E8 1435 aa33.92■■■■□ 3.02
HLA-C-201ENST00000376228 DISP1Q96F81 1524 aa33.92■■■■□ 3.02
HLA-C-201ENST00000376228 UGGT2Q9NYU1 1516 aa33.92■■■■□ 3.02
HLA-C-201ENST00000376228 TTBK1Q5TCY1 1321 aaPredicted RBP33.91■■■■□ 3.02
HLA-C-201ENST00000376228 TNIKQ9UKE5 1360 aa33.89■■■■□ 3.02
HLA-C-201ENST00000376228 ADCY10Q96PN6 1610 aa33.87■■■■□ 3.01
HLA-C-201ENST00000376228 KIAA0556O60303 1618 aa33.85■■■■□ 3.01
HLA-C-201ENST00000376228 PTPRGP23470 1445 aa33.83■■■■□ 3.01
HLA-C-201ENST00000376228 EHMT2Q96KQ7 1210 aa33.78■■■■□ 3
HLA-C-201ENST00000376228 NPM1P06748 294 aaKnown RBP eCLIP33.67■■■□□ 2.98
HLA-C-201ENST00000376228 UBTFP17480 764 aaKnown RBP33.67■■■□□ 2.98
HLA-C-201ENST00000376228 CEP162Q5TB80 1403 aa33.63■■■□□ 2.97
HLA-C-201ENST00000376228 KIF13AQ9H1H9 1805 aa33.62■■■□□ 2.97
HLA-C-201ENST00000376228 UACAQ9BZF9 1416 aa33.61■■■□□ 2.97
HLA-C-201ENST00000376228 MAPKBP1O60336 1514 aa33.6■■■□□ 2.97
HLA-C-201ENST00000376228 ABCC2Q92887 1545 aa33.59■■■□□ 2.97
HLA-C-201ENST00000376228 RANGAP1P46060 587 aaPredicted RBP33.58■■■□□ 2.97
HLA-C-201ENST00000376228 SAMD9Q5K651 1589 aa33.56■■■□□ 2.96
HLA-C-201ENST00000376228 UHRF1BP1LA0JNW5 1464 aa33.56■■■□□ 2.96
HLA-C-201ENST00000376228 P3H3Q8IVL6 736 aa33.56■■■□□ 2.96
HLA-C-201ENST00000376228 PLB1Q6P1J6 1458 aa33.53■■■□□ 2.96
HLA-C-201ENST00000376228 DIP2BQ9P265 1576 aa33.48■■■□□ 2.95
HLA-C-201ENST00000376228 ZCCHC11Q5TAX3 1644 aaKnown RBP33.47■■■□□ 2.95
HLA-C-201ENST00000376228 ABCC10Q5T3U5 1492 aa33.47■■■□□ 2.95
HLA-C-201ENST00000376228 ABCA8O94911 1581 aa33.46■■■□□ 2.95
HLA-C-201ENST00000376228 KDM5BQ9UGL1 1544 aa33.43■■■□□ 2.94
HLA-C-201ENST00000376228 FAM69CQ0P6D2 419 aa33.41■■■□□ 2.94
HLA-C-201ENST00000376228 ASXL2Q76L83 1435 aa33.39■■■□□ 2.94
HLA-C-201ENST00000376228 CLIP1P30622 1438 aa33.37■■■□□ 2.93
HLA-C-201ENST00000376228 FHOD3Q2V2M9 1422 aa33.37■■■□□ 2.93
HLA-C-201ENST00000376228 EFCAB5A4FU69 1503 aa33.34■■■□□ 2.93
HLA-C-201ENST00000376228 TSPOAP1O95153 1857 aa33.32■■■□□ 2.92
HLA-C-201ENST00000376228 RAPGEF6Q8TEU7 1601 aa33.29■■■□□ 2.92
HLA-C-201ENST00000376228 ARID3CA6NKF2 412 aa33.27■■■□□ 2.92
HLA-C-201ENST00000376228 EPRSP07814 1512 aaKnown RBP33.2■■■□□ 2.9
HLA-C-201ENST00000376228 WDR7Q9Y4E6 1490 aa33.19■■■□□ 2.9
HLA-C-201ENST00000376228 GLI2P10070 1586 aa33.19■■■□□ 2.9
HLA-C-201ENST00000376228 ARHGAP35Q9NRY4 1499 aa33.18■■■□□ 2.9
HLA-C-201ENST00000376228 ATP10BO94823 1461 aa33.16■■■□□ 2.9
HLA-C-201ENST00000376228 NUP153P49790 1475 aaKnown RBP33.13■■■□□ 2.89
HLA-C-201ENST00000376228 VPS8Q8N3P4 1428 aa33.12■■■□□ 2.89
HLA-C-201ENST00000376228 PPRC1Q5VV67 1664 aaKnown RBP33.12■■■□□ 2.89
HLA-C-201ENST00000376228 MAP3K4Q9Y6R4 1608 aa33.1■■■□□ 2.89
HLA-C-201ENST00000376228 KCNH8Q96L42 1107 aa33.07■■■□□ 2.88
HLA-C-201ENST00000376228 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.05■■■□□ 2.88
HLA-C-201ENST00000376228 HNRNPUL2Q1KMD3 747 aaKnown RBP33.05■■■□□ 2.88
HLA-C-201ENST00000376228 FMN1Q68DA7 1419 aa33■■■□□ 2.87
HLA-C-201ENST00000376228 KDM6BO15054 1643 aa32.99■■■□□ 2.87
HLA-C-201ENST00000376228 CFAP43Q8NDM7 1665 aa32.98■■■□□ 2.87
HLA-C-201ENST00000376228 TRIM26Q12899 539 aaPredicted RBP32.97■■■□□ 2.87
HLA-C-201ENST00000376228 CDK13Q14004 1512 aaKnown RBP32.94■■■□□ 2.86
HLA-C-201ENST00000376228 HECW1Q76N89 1606 aa32.94■■■□□ 2.86
HLA-C-201ENST00000376228 ATP1B4Q9UN42 357 aaPredicted RBP32.93■■■□□ 2.86
HLA-C-201ENST00000376228 CD109Q6YHK3 1445 aa32.89■■■□□ 2.86
HLA-C-201ENST00000376228 LRRIQ1Q96JM4 1722 aa32.89■■■□□ 2.86
HLA-C-201ENST00000376228 TEX14Q8IWB6 1497 aa32.88■■■□□ 2.85
HLA-C-201ENST00000376228 ABCA9Q8IUA7 1624 aa32.87■■■□□ 2.85
HLA-C-201ENST00000376228 PCF11O94913 1555 aaKnown RBP32.85■■■□□ 2.85
HLA-C-201ENST00000376228 PCGF6Q9BYE7 350 aa32.82■■■□□ 2.85
HLA-C-201ENST00000376228 PLEKHD1A6NEE1 506 aa32.82■■■□□ 2.84
HLA-C-201ENST00000376228 MAGI3Q5TCQ9 1506 aa32.81■■■□□ 2.84
HLA-C-201ENST00000376228 COL17A1Q9UMD9 1497 aaPredicted RBP32.76■■■□□ 2.83
HLA-C-201ENST00000376228 CASKIN1Q8WXD9 1431 aa32.74■■■□□ 2.83
HLA-C-201ENST00000376228 APLP2Q06481 763 aa32.71■■■□□ 2.83
HLA-C-201ENST00000376228 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.71■■■□□ 2.83
HLA-C-201ENST00000376228 TTC37Q6PGP7 1564 aa32.7■■■□□ 2.83
HLA-C-201ENST00000376228 FYCO1Q9BQS8 1478 aa32.67■■■□□ 2.82
HLA-C-201ENST00000376228 MAP3K1Q13233 1512 aa32.66■■■□□ 2.82
HLA-C-201ENST00000376228 PPARGC1BQ86YN6 1023 aaKnown RBP32.66■■■□□ 2.82
HLA-C-201ENST00000376228 CCDC18Q5T9S5 1454 aa32.63■■■□□ 2.81
HLA-C-201ENST00000376228 KIF14Q15058 1648 aa32.63■■■□□ 2.81
HLA-C-201ENST00000376228 CDK11AQ9UQ88 783 aaPredicted RBP32.61■■■□□ 2.81
HLA-C-201ENST00000376228 TROQ12816 1431 aaPredicted RBP32.58■■■□□ 2.81
HLA-C-201ENST00000376228 NEO1Q92859 1461 aa32.54■■■□□ 2.8
HLA-C-201ENST00000376228 ARAP3Q8WWN8 1544 aa32.53■■■□□ 2.8
HLA-C-201ENST00000376228 MYO5CQ9NQX4 1742 aa32.53■■■□□ 2.8
HLA-C-201ENST00000376228 TIAM1Q13009 1591 aa32.51■■■□□ 2.79
HLA-C-201ENST00000376228 FANCAO15360 1455 aa32.5■■■□□ 2.79
HLA-C-201ENST00000376228 CFAP74Q9C0B2 1584 aa32.49■■■□□ 2.79
HLA-C-201ENST00000376228 PHLDB1Q86UU1 1377 aa32.47■■■□□ 2.79
HLA-C-201ENST00000376228 PLCH2O75038 1416 aa32.44■■■□□ 2.78
HLA-C-201ENST00000376228 AKNAQ7Z591 1439 aa32.43■■■□□ 2.78
HLA-C-201ENST00000376228 FRMPD1Q5SYB0 1578 aa32.43■■■□□ 2.78
HLA-C-201ENST00000376228 RAPGEF3O95398 923 aa32.42■■■□□ 2.78
HLA-C-201ENST00000376228 CDC42BPBQ9Y5S2 1711 aa32.38■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms