RNA–Protein interactions for RNA: ENST00000376088.7

CLCN5-202, Transcript of chloride voltage-gated channel 5, humanhuman

TSL 2 BASIC

Gene CLCN5, Length 10,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN5-202ENST00000376088 ATP1B4Q9UN42 357 aaPredicted RBP6.91□□□□□ -1.3
CLCN5-202ENST00000376088 A0A0U1RQG5 324 aaPredicted RBP6.9□□□□□ -1.3
CLCN5-202ENST00000376088 TAF3Q5VWG9 929 aa6.9□□□□□ -1.3
CLCN5-202ENST00000376088 GOLGA6L6A8MZA4 724 aa6.9□□□□□ -1.3
CLCN5-202ENST00000376088 MIER1Q8N108 512 aa6.9□□□□□ -1.3
CLCN5-202ENST00000376088 TCERG1O14776 1098 aaKnown RBP6.9□□□□□ -1.31
CLCN5-202ENST00000376088 MS4A1P11836 297 aa6.89□□□□□ -1.31
CLCN5-202ENST00000376088 ISY1Q9ULR0 285 aaKnown RBP6.89□□□□□ -1.31
CLCN5-202ENST00000376088 NPM2Q86SE8 214 aaKnown RBP6.88□□□□□ -1.31
CLCN5-202ENST00000376088 IPO9Q96P70 1041 aaKnown RBP6.87□□□□□ -1.31
CLCN5-202ENST00000376088 TMC1Q8TDI8 760 aa6.87□□□□□ -1.31
CLCN5-202ENST00000376088 CSRNP3Q8WYN3 585 aa6.86□□□□□ -1.31
CLCN5-202ENST00000376088 GOLGA3Q08378 1498 aa6.86□□□□□ -1.31
CLCN5-202ENST00000376088 DNTTIP2Q5QJE6 756 aaKnown RBP6.85□□□□□ -1.31
CLCN5-202ENST00000376088 GBP4Q96PP9 640 aa6.84□□□□□ -1.31
CLCN5-202ENST00000376088 PHLDB1Q86UU1 1377 aa6.84□□□□□ -1.31
CLCN5-202ENST00000376088 RRP9O43818 475 aaKnown RBP6.84□□□□□ -1.32
CLCN5-202ENST00000376088 SYAP1Q96A49 352 aaPredicted RBP6.84□□□□□ -1.32
CLCN5-202ENST00000376088 EIF4G2P78344 907 aaKnown RBP eCLIP6.83□□□□□ -1.32
CLCN5-202ENST00000376088 CSPP1Q1MSJ5 1256 aa6.83□□□□□ -1.32
CLCN5-202ENST00000376088 CASC1Q6TDU7 716 aa6.83□□□□□ -1.32
CLCN5-202ENST00000376088 KIAA2012Q0VF49 1180 aa6.83□□□□□ -1.32
CLCN5-202ENST00000376088 PTMAP06454 111 aaKnown RBP6.83□□□□□ -1.32
CLCN5-202ENST00000376088 FAM50AQ14320 339 aaKnown RBP6.83□□□□□ -1.32
CLCN5-202ENST00000376088 TSHZ2Q9NRE2 1034 aa6.83□□□□□ -1.32
CLCN5-202ENST00000376088 RB1CC1Q8TDY2 1594 aa6.83□□□□□ -1.32
CLCN5-202ENST00000376088 ITGAEP38570 1179 aa6.82□□□□□ -1.32
CLCN5-202ENST00000376088 SKOR2Q2VWA4 1001 aaPredicted RBP6.82□□□□□ -1.32
CLCN5-202ENST00000376088 TNIKQ9UKE5 1360 aa6.82□□□□□ -1.32
CLCN5-202ENST00000376088 TPM2P07951 284 aa6.82□□□□□ -1.32
CLCN5-202ENST00000376088 TNNT3P45378 269 aaPredicted RBP6.82□□□□□ -1.32
CLCN5-202ENST00000376088 PKNOX2Q96KN3 472 aa6.82□□□□□ -1.32
CLCN5-202ENST00000376088 MYH16Q9H6N6 1097 aa6.81□□□□□ -1.32
CLCN5-202ENST00000376088 MRS2Q9HD23 443 aa6.81□□□□□ -1.32
CLCN5-202ENST00000376088 PHF14O94880 888 aa6.81□□□□□ -1.32
CLCN5-202ENST00000376088 CEP164Q9UPV0 1460 aa6.81□□□□□ -1.32
CLCN5-202ENST00000376088 PRKCSHP14314 528 aaPredicted RBP6.81□□□□□ -1.32
CLCN5-202ENST00000376088 GSE1Q14687 1217 aa6.81□□□□□ -1.32
CLCN5-202ENST00000376088 GOLGA6L1Q8N7Z2 621 aa6.81□□□□□ -1.32
CLCN5-202ENST00000376088 DDX10Q13206 875 aaKnown RBP6.8□□□□□ -1.32
CLCN5-202ENST00000376088 UBE2Q2Q8WVN8 375 aa6.8□□□□□ -1.32
CLCN5-202ENST00000376088 HTATSF1O43719 755 aaKnown RBP6.8□□□□□ -1.32
CLCN5-202ENST00000376088 DDX11L8A8MPP1 907 aa6.8□□□□□ -1.32
CLCN5-202ENST00000376088 CDCA8Q53HL2 280 aa6.8□□□□□ -1.32
CLCN5-202ENST00000376088 RSF1Q96T23 1441 aaPredicted RBP6.79□□□□□ -1.32
CLCN5-202ENST00000376088 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.79□□□□□ -1.32
CLCN5-202ENST00000376088 CCDC66A2RUB6 948 aa6.79□□□□□ -1.32
CLCN5-202ENST00000376088 TSPYL1Q9H0U9 437 aa6.78□□□□□ -1.32
CLCN5-202ENST00000376088 WRNQ14191 1432 aaPredicted RBP eCLIP6.78□□□□□ -1.329e-6■■■■■ 50.1
CLCN5-202ENST00000376088 AAMPQ13685 434 aa6.78□□□□□ -1.32
CLCN5-202ENST00000376088 ZRSR1Q15695 479 aaKnown RBP6.78□□□□□ -1.32
CLCN5-202ENST00000376088 TRIM52Q96A61 297 aa6.78□□□□□ -1.32
CLCN5-202ENST00000376088 SETQ01105 290 aaPredicted RBP6.77□□□□□ -1.32
CLCN5-202ENST00000376088 FAM43AQ8N2R8 423 aa6.77□□□□□ -1.32
CLCN5-202ENST00000376088 CLIP1P30622 1438 aa6.77□□□□□ -1.33
CLCN5-202ENST00000376088 CEP162Q5TB80 1403 aa6.77□□□□□ -1.33
CLCN5-202ENST00000376088 PDE3BQ13370 1112 aa6.77□□□□□ -1.33
CLCN5-202ENST00000376088 WDR43Q15061 677 aaKnown RBP eCLIP6.77□□□□□ -1.33
CLCN5-202ENST00000376088 NOM1Q5C9Z4 860 aaKnown RBP6.77□□□□□ -1.33
CLCN5-202ENST00000376088 HSCBQ8IWL3 235 aa6.76□□□□□ -1.33
CLCN5-202ENST00000376088 HAP1P54257 671 aaPredicted RBP6.76□□□□□ -1.33
CLCN5-202ENST00000376088 NGEFQ8N5V2 710 aa6.76□□□□□ -1.33
CLCN5-202ENST00000376088 ROCK2O75116 1388 aaKnown RBP6.75□□□□□ -1.33
CLCN5-202ENST00000376088 GPS2Q13227 327 aa6.75□□□□□ -1.33
CLCN5-202ENST00000376088 PODXL2Q9NZ53 605 aa6.75□□□□□ -1.33
CLCN5-202ENST00000376088 BAZ1AQ9NRL2 1556 aaPredicted RBP6.75□□□□□ -1.33
CLCN5-202ENST00000376088 DHX8Q14562 1220 aaKnown RBP6.74□□□□□ -1.33
CLCN5-202ENST00000376088 MYO15BQ96JP2 1530 aa6.74□□□□□ -1.33
CLCN5-202ENST00000376088 FHAD1B1AJZ9 1412 aa6.74□□□□□ -1.33
CLCN5-202ENST00000376088 HMGB1P09429 215 aaKnown RBP6.74□□□□□ -1.33
CLCN5-202ENST00000376088 VSIG10Q8N0Z9 540 aa6.74□□□□□ -1.33
CLCN5-202ENST00000376088 HMGN5P82970 282 aaKnown RBP6.74□□□□□ -1.33
CLCN5-202ENST00000376088 FAM9BQ8IZU0 186 aa6.74□□□□□ -1.33
CLCN5-202ENST00000376088 MAPK8IP3Q9UPT6 1336 aa6.73□□□□□ -1.33
CLCN5-202ENST00000376088 TEX35Q5T0J7 233 aa6.73□□□□□ -1.33
CLCN5-202ENST00000376088 CWC15Q9P013 229 aaKnown RBP6.72□□□□□ -1.33
CLCN5-202ENST00000376088 CAVIN1Q6NZI2 390 aaKnown RBP6.71□□□□□ -1.34
CLCN5-202ENST00000376088 KTN1Q86UP2 1357 aaKnown RBP6.7□□□□□ -1.34
CLCN5-202ENST00000376088 TPM3P06753 285 aa6.7□□□□□ -1.34
CLCN5-202ENST00000376088 PDCL2Q8N4E4 241 aa6.7□□□□□ -1.34
CLCN5-202ENST00000376088 CHMP4CQ96CF2 233 aa6.7□□□□□ -1.34
CLCN5-202ENST00000376088 HSP90AB1P08238 724 aaKnown RBP6.7□□□□□ -1.34
CLCN5-202ENST00000376088 EIF3AQ14152 1382 aaKnown RBP6.7□□□□□ -1.34
CLCN5-202ENST00000376088 MCCP23508 829 aa6.7□□□□□ -1.34
CLCN5-202ENST00000376088 DIAPH3Q9NSV4 1193 aa6.69□□□□□ -1.34
CLCN5-202ENST00000376088 ZBED9Q6R2W3 1325 aa6.69□□□□□ -1.34
CLCN5-202ENST00000376088 BAZ1BQ9UIG0 1483 aaKnown RBP6.69□□□□□ -1.34
CLCN5-202ENST00000376088 IL27Q8NEV9 243 aa6.69□□□□□ -1.34
CLCN5-202ENST00000376088 GOLGA6L4A6NEF3 574 aa6.69□□□□□ -1.34
CLCN5-202ENST00000376088 ABCC9O60706 1549 aa6.68□□□□□ -1.34
CLCN5-202ENST00000376088 MRE11P49959 708 aa6.68□□□□□ -1.34
CLCN5-202ENST00000376088 CCNB3Q8WWL7 1395 aa6.68□□□□□ -1.34
CLCN5-202ENST00000376088 VPS8Q8N3P4 1428 aa6.68□□□□□ -1.34
CLCN5-202ENST00000376088 PMFBP1Q8TBY8 1022 aa6.68□□□□□ -1.34
CLCN5-202ENST00000376088 CCDC34Q96HJ3 373 aa6.67□□□□□ -1.34
CLCN5-202ENST00000376088 RTN4Q9NQC3 1192 aaKnown RBP6.67□□□□□ -1.34
CLCN5-202ENST00000376088 RALBP1Q15311 655 aa6.67□□□□□ -1.34
CLCN5-202ENST00000376088 USP8P40818 1118 aa6.67□□□□□ -1.34
CLCN5-202ENST00000376088 PDCL3Q9H2J4 239 aa6.67□□□□□ -1.34
CLCN5-202ENST00000376088 CHMP4AQ9BY43 222 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms