RNA–Protein interactions for RNA: ENST00000376042.5

CCNB3-204, Transcript of cyclin B3, human

APPRIS P1 TSL 2 BASIC

Gene CCNB3, Length 4,693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNB3-204	ENST00000376042	TRIM52	Q96A61	297 aa		11.26	□□□□□ -0.61
CCNB3-204	ENST00000376042	IGF1R	P08069	1367 aa		11.25	□□□□□ -0.61
CCNB3-204	ENST00000376042	CYB5RL	Q6IPT4	315 aa		11.24	□□□□□ -0.61
CCNB3-204	ENST00000376042	ZEB1	P37275	1124 aa	Predicted RBP	11.24	□□□□□ -0.61
CCNB3-204	ENST00000376042	PTPRG	P23470	1445 aa		11.23	□□□□□ -0.61
CCNB3-204	ENST00000376042	FMN1	Q68DA7	1419 aa		11.23	□□□□□ -0.61
CCNB3-204	ENST00000376042	ACIN1	Q9UKV3	1341 aa	Known RBP	11.21	□□□□□ -0.61
CCNB3-204	ENST00000376042	CEP162	Q5TB80	1403 aa		11.21	□□□□□ -0.61
CCNB3-204	ENST00000376042	CUX1	P39880	1505 aa		11.2	□□□□□ -0.62
CCNB3-204	ENST00000376042	TOP2B	Q02880	1626 aa		11.19	□□□□□ -0.62
CCNB3-204	ENST00000376042	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.19	□□□□□ -0.62
CCNB3-204	ENST00000376042	URB2	Q14146	1524 aa	Known RBP	11.18	□□□□□ -0.62
CCNB3-204	ENST00000376042	ABCA10	Q8WWZ4	1543 aa		11.18	□□□□□ -0.62
CCNB3-204	ENST00000376042	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11.17	□□□□□ -0.62
CCNB3-204	ENST00000376042	SNAPC4	Q5SXM2	1469 aa		11.17	□□□□□ -0.62
CCNB3-204	ENST00000376042	ARID4B	Q4LE39	1312 aa	Predicted RBP	11.15	□□□□□ -0.63
CCNB3-204	ENST00000376042	CCNB3	Q8WWL7	1395 aa		11.14	□□□□□ -0.63
CCNB3-204	ENST00000376042	SYNJ2	O15056	1496 aa		11.14	□□□□□ -0.63
CCNB3-204	ENST00000376042	EFCAB2	Q5VUJ9	269 aa		11.14	□□□□□ -0.63
CCNB3-204	ENST00000376042	STAG3	Q9UJ98	1225 aa		11.13	□□□□□ -0.63
CCNB3-204	ENST00000376042	SYNJ1	O43426	1573 aa		11.11	□□□□□ -0.63
CCNB3-204	ENST00000376042	PRG4	Q92954	1404 aa	Predicted RBP	11.1	□□□□□ -0.63
CCNB3-204	ENST00000376042	BCAN	Q96GW7	911 aa		11.1	□□□□□ -0.63
CCNB3-204	ENST00000376042	WDR62	O43379	1518 aa		11.09	□□□□□ -0.63
CCNB3-204	ENST00000376042	ERICH3	Q5RHP9	1530 aa		11.09	□□□□□ -0.63
CCNB3-204	ENST00000376042	KIAA0586	Q9BVV6	1533 aa		11.07	□□□□□ -0.64
CCNB3-204	ENST00000376042	RSPH4A	Q5TD94	716 aa		11.06	□□□□□ -0.64
CCNB3-204	ENST00000376042	FHOD3	Q2V2M9	1422 aa		11.05	□□□□□ -0.64
CCNB3-204	ENST00000376042	VPS8	Q8N3P4	1428 aa		11.04	□□□□□ -0.64
CCNB3-204	ENST00000376042	FAM69C	Q0P6D2	419 aa		11.04	□□□□□ -0.64
CCNB3-204	ENST00000376042	PLPPR3	Q6T4P5	718 aa		11.03	□□□□□ -0.64
CCNB3-204	ENST00000376042	RUSC2	Q8N2Y8	1516 aa		11.03	□□□□□ -0.64
CCNB3-204	ENST00000376042	GRIN2A	Q12879	1464 aa		11.03	□□□□□ -0.64
CCNB3-204	ENST00000376042	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.03	□□□□□ -0.64
CCNB3-204	ENST00000376042	ZNF608	Q9ULD9	1512 aa	Predicted RBP	11.03	□□□□□ -0.64
CCNB3-204	ENST00000376042	CHIC2	Q9UKJ5	165 aa		11.03	□□□□□ -0.64
CCNB3-204	ENST00000376042	CCDC18	Q5T9S5	1454 aa		11.03	□□□□□ -0.64
CCNB3-204	ENST00000376042	CUL7	Q14999	1698 aa		11.01	□□□□□ -0.65
CCNB3-204	ENST00000376042	CHGA	P10645	457 aa	Known RBP	11	□□□□□ -0.65
CCNB3-204	ENST00000376042	KIF21A	Q7Z4S6	1674 aa		10.99	□□□□□ -0.65
CCNB3-204	ENST00000376042	BIVM-ERCC5	R4GMW8	1640 aa		10.99	□□□□□ -0.65
CCNB3-204	ENST00000376042	PRX	Q9BXM0	1461 aa		10.99	□□□□□ -0.65
CCNB3-204	ENST00000376042	KANK1	Q14678	1352 aa		10.98	□□□□□ -0.65
CCNB3-204	ENST00000376042	WDR97	A6NE52	1622 aa		10.98	□□□□□ -0.65
CCNB3-204	ENST00000376042	EFCAB5	A4FU69	1503 aa		10.96	□□□□□ -0.66
CCNB3-204	ENST00000376042	ARHGAP35	Q9NRY4	1499 aa		10.96	□□□□□ -0.66
CCNB3-204	ENST00000376042	KIF21B	O75037	1637 aa		10.95	□□□□□ -0.66
CCNB3-204	ENST00000376042	UACA	Q9BZF9	1416 aa		10.94	□□□□□ -0.66
CCNB3-204	ENST00000376042	HDGF	P51858	240 aa	Known RBP	10.94	□□□□□ -0.66
CCNB3-204	ENST00000376042	SPAG9	O60271	1321 aa	Known RBP	10.93	□□□□□ -0.66
CCNB3-204	ENST00000376042	IQGAP2	Q13576	1575 aa		10.92	□□□□□ -0.66
CCNB3-204	ENST00000376042	RRP7BP	Q9NSQ0	103 aa		10.92	□□□□□ -0.66
CCNB3-204	ENST00000376042	NEUROD1	Q13562	356 aa		10.92	□□□□□ -0.66
CCNB3-204	ENST00000376042	PPP1R15A	O75807	674 aa	Predicted RBP	10.92	□□□□□ -0.66
CCNB3-204	ENST00000376042	PRDM2	Q13029	1718 aa		10.91	□□□□□ -0.66
CCNB3-204	ENST00000376042	MLEC	Q14165	292 aa		10.9	□□□□□ -0.66
CCNB3-204	ENST00000376042	ZNF326	Q5BKZ1	582 aa	Known RBP	10.9	□□□□□ -0.66
CCNB3-204	ENST00000376042	SLC4A1AP	Q9BWU0	796 aa	Known RBP	10.9	□□□□□ -0.66
CCNB3-204	ENST00000376042	POLR3GL	Q9BT43	218 aa		10.89	□□□□□ -0.67
CCNB3-204	ENST00000376042	ANKRD30A	Q9BXX3	1397 aa		10.88	□□□□□ -0.67
CCNB3-204	ENST00000376042	CASKIN1	Q8WXD9	1431 aa		10.88	□□□□□ -0.67
CCNB3-204	ENST00000376042	EIF4G3	O43432	1585 aa	Known RBP	10.87	□□□□□ -0.67
CCNB3-204	ENST00000376042	GGT6	Q6P531	493 aa		10.86	□□□□□ -0.67
CCNB3-204	ENST00000376042	AEBP2	Q6ZN18	517 aa	Predicted RBP	10.86	□□□□□ -0.67
CCNB3-204	ENST00000376042	HNRNPM	P52272	730 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
CCNB3-204	ENST00000376042	ADAMTS12	P58397	1594 aa		10.83	□□□□□ -0.68
CCNB3-204	ENST00000376042	THOC2	Q8NI27	1593 aa	Known RBP	10.83	□□□□□ -0.68
CCNB3-204	ENST00000376042	PLB1	Q6P1J6	1458 aa		10.83	□□□□□ -0.68
CCNB3-204	ENST00000376042	TONSL	Q96HA7	1378 aa		10.83	□□□□□ -0.68
CCNB3-204	ENST00000376042	FYCO1	Q9BQS8	1478 aa		10.82	□□□□□ -0.68
CCNB3-204	ENST00000376042	NUP160	Q12769	1436 aa		10.82	□□□□□ -0.68
CCNB3-204	ENST00000376042	PLEKHH2	Q8IVE3	1493 aa		10.81	□□□□□ -0.68
CCNB3-204	ENST00000376042	KIF3B	O15066	747 aa		10.81	□□□□□ -0.68
CCNB3-204	ENST00000376042	KANK4	Q5T7N3	995 aa	Predicted RBP	10.81	□□□□□ -0.68
CCNB3-204	ENST00000376042	TRO	Q12816	1431 aa	Predicted RBP	10.8	□□□□□ -0.68
CCNB3-204	ENST00000376042	HECW1	Q76N89	1606 aa		10.79	□□□□□ -0.68
CCNB3-204	ENST00000376042	WASHC2C	Q9Y4E1	1318 aa		10.78	□□□□□ -0.68
CCNB3-204	ENST00000376042	DNAJC5	Q9H3Z4	198 aa		10.78	□□□□□ -0.68
CCNB3-204	ENST00000376042	MYOM3	Q5VTT5	1437 aa		10.77	□□□□□ -0.68
CCNB3-204	ENST00000376042	C14orf37	Q86TY3	774 aa		10.77	□□□□□ -0.68
CCNB3-204	ENST00000376042	POGZ	Q7Z3K3	1410 aa		10.76	□□□□□ -0.69
CCNB3-204	ENST00000376042	CD109	Q6YHK3	1445 aa		10.76	□□□□□ -0.69
CCNB3-204	ENST00000376042	TARBP1	Q13395	1621 aa	Known RBP	10.76	□□□□□ -0.69
CCNB3-204	ENST00000376042	PHLDB1	Q86UU1	1377 aa		10.75	□□□□□ -0.69
CCNB3-204	ENST00000376042	ARHGAP5	Q13017	1502 aa		10.75	□□□□□ -0.69
CCNB3-204	ENST00000376042	ABCA5	Q8WWZ7	1642 aa		10.75	□□□□□ -0.69
CCNB3-204	ENST00000376042	EID1	Q9Y6B2	187 aa		10.74	□□□□□ -0.69
CCNB3-204	ENST00000376042	TEX14	Q8IWB6	1497 aa		10.74	□□□□□ -0.69
CCNB3-204	ENST00000376042	UGGT2	Q9NYU1	1516 aa		10.73	□□□□□ -0.69
CCNB3-204	ENST00000376042	NUP155	O75694	1391 aa		10.72	□□□□□ -0.69
CCNB3-204	ENST00000376042	ARAP1	Q96P48	1450 aa		10.71	□□□□□ -0.69
CCNB3-204	ENST00000376042	EHBP1L1	Q8N3D4	1523 aa		10.71	□□□□□ -0.69
CCNB3-204	ENST00000376042	SLC24A1	O60721	1099 aa		10.71	□□□□□ -0.69
CCNB3-204	ENST00000376042	PBRM1	Q86U86	1689 aa		10.71	□□□□□ -0.7
CCNB3-204	ENST00000376042	KDM2A	Q9Y2K7	1162 aa		10.71	□□□□□ -0.7
CCNB3-204	ENST00000376042	EPRS	P07814	1512 aa	Known RBP	10.71	□□□□□ -0.7
CCNB3-204	ENST00000376042	SETD5	Q9C0A6	1442 aa		10.7	□□□□□ -0.7
CCNB3-204	ENST00000376042	LRRC9	Q6ZRR7	1453 aa		10.69	□□□□□ -0.7
CCNB3-204	ENST00000376042	RGL3	Q3MIN7	710 aa		10.69	□□□□□ -0.7
CCNB3-204	ENST00000376042	NCOA2	Q15596	1464 aa		10.69	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms