RNA–Protein interactions for RNA: ENST00000375779.6

CLIC1-206, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIC1, Length 1,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-206ENST00000375779 KIF27Q86VH2 1401 aa25.59■■□□□ 1.69
CLIC1-206ENST00000375779 PRG4Q92954 1404 aaPredicted RBP25.54■■□□□ 1.68
CLIC1-206ENST00000375779 RUSC2Q8N2Y8 1516 aa25.49■■□□□ 1.67
CLIC1-206ENST00000375779 KIAA0586Q9BVV6 1533 aa25.49■■□□□ 1.67
CLIC1-206ENST00000375779 CUL7Q14999 1698 aa25.47■■□□□ 1.67
CLIC1-206ENST00000375779 CARMIL1Q5VZK9 1371 aa25.44■■□□□ 1.66
CLIC1-206ENST00000375779 ADCY10Q96PN6 1610 aa25.22■■□□□ 1.63
CLIC1-206ENST00000375779 KIF13AQ9H1H9 1805 aa25.21■■□□□ 1.63
CLIC1-206ENST00000375779 MAPKBP1O60336 1514 aa25.21■■□□□ 1.63
CLIC1-206ENST00000375779 RAPGEF2Q9Y4G8 1499 aa25.2■■□□□ 1.62
CLIC1-206ENST00000375779 ABCC10Q5T3U5 1492 aa25.19■■□□□ 1.62
CLIC1-206ENST00000375779 NPM1P06748 294 aaKnown RBP eCLIP25.18■■□□□ 1.62
CLIC1-206ENST00000375779 PTPRGP23470 1445 aa25.18■■□□□ 1.62
CLIC1-206ENST00000375779 TNIKQ9UKE5 1360 aa25.17■■□□□ 1.62
CLIC1-206ENST00000375779 IQGAP2Q13576 1575 aa25.16■■□□□ 1.62
CLIC1-206ENST00000375779 CARMIL2Q6F5E8 1435 aa25.15■■□□□ 1.62
CLIC1-206ENST00000375779 DISP1Q96F81 1524 aa25.12■■□□□ 1.61
CLIC1-206ENST00000375779 UGGT2Q9NYU1 1516 aa25.11■■□□□ 1.61
CLIC1-206ENST00000375779 FAM69CQ0P6D2 419 aa25.09■■□□□ 1.61
CLIC1-206ENST00000375779 UHRF1BP1LA0JNW5 1464 aa25.07■■□□□ 1.6
CLIC1-206ENST00000375779 DIP2BQ9P265 1576 aa25.05■■□□□ 1.6
CLIC1-206ENST00000375779 PRXQ9BXM0 1461 aa25.05■■□□□ 1.6
CLIC1-206ENST00000375779 ABCC2Q92887 1545 aa25.03■■□□□ 1.6
CLIC1-206ENST00000375779 UACAQ9BZF9 1416 aa25.01■■□□□ 1.59
CLIC1-206ENST00000375779 KDM5BQ9UGL1 1544 aa24.95■■□□□ 1.58
CLIC1-206ENST00000375779 KIAA0556O60303 1618 aa24.94■■□□□ 1.58
CLIC1-206ENST00000375779 PLB1Q6P1J6 1458 aa24.93■■□□□ 1.58
CLIC1-206ENST00000375779 ASXL2Q76L83 1435 aa24.91■■□□□ 1.58
CLIC1-206ENST00000375779 GLI2P10070 1586 aa24.89■■□□□ 1.58
CLIC1-206ENST00000375779 CTTNBP2Q8WZ74 1663 aa24.89■■□□□ 1.58
CLIC1-206ENST00000375779 TTBK1Q5TCY1 1321 aaPredicted RBP24.88■■□□□ 1.57
CLIC1-206ENST00000375779 CSRNP3Q8WYN3 585 aa24.87■■□□□ 1.57
CLIC1-206ENST00000375779 GOLGA3Q08378 1498 aa24.84■■□□□ 1.57
CLIC1-206ENST00000375779 EPRSP07814 1512 aaKnown RBP24.78■■□□□ 1.56
CLIC1-206ENST00000375779 TSPOAP1O95153 1857 aa24.77■■□□□ 1.56
CLIC1-206ENST00000375779 ABCA8O94911 1581 aa24.77■■□□□ 1.56
CLIC1-206ENST00000375779 PPRC1Q5VV67 1664 aaKnown RBP24.77■■□□□ 1.56
CLIC1-206ENST00000375779 ZCCHC11Q5TAX3 1644 aaKnown RBP24.76■■□□□ 1.55
CLIC1-206ENST00000375779 EEA1Q15075 1411 aa24.76■■□□□ 1.55
CLIC1-206ENST00000375779 KDM6BO15054 1643 aa24.72■■□□□ 1.55
CLIC1-206ENST00000375779 MAP3K4Q9Y6R4 1608 aa24.7■■□□□ 1.54
CLIC1-206ENST00000375779 WDR7Q9Y4E6 1490 aa24.68■■□□□ 1.54
CLIC1-206ENST00000375779 COL17A1Q9UMD9 1497 aaPredicted RBP24.65■■□□□ 1.54
CLIC1-206ENST00000375779 SAMD9Q5K651 1589 aa24.63■■□□□ 1.53
CLIC1-206ENST00000375779 ATP10BO94823 1461 aa24.59■■□□□ 1.53
CLIC1-206ENST00000375779 KDM4FA0A1W2PPD8 638 aa24.59■■□□□ 1.53
CLIC1-206ENST00000375779 TEX14Q8IWB6 1497 aa24.58■■□□□ 1.53
CLIC1-206ENST00000375779 MAGI3Q5TCQ9 1506 aa24.57■■□□□ 1.52
CLIC1-206ENST00000375779 P3H3Q8IVL6 736 aa24.57■■□□□ 1.52
CLIC1-206ENST00000375779 FAM9AQ8IZU1 332 aaPredicted RBP24.54■■□□□ 1.52
CLIC1-206ENST00000375779 CD109Q6YHK3 1445 aa24.53■■□□□ 1.52
CLIC1-206ENST00000375779 CFAP43Q8NDM7 1665 aa24.52■■□□□ 1.52
CLIC1-206ENST00000375779 KCNH8Q96L42 1107 aa24.51■■□□□ 1.51
CLIC1-206ENST00000375779 SENP3Q9H4L4 574 aaPredicted RBP24.51■■□□□ 1.51
CLIC1-206ENST00000375779 KIF21BO75037 1637 aa24.5■■□□□ 1.51
CLIC1-206ENST00000375779 RAPGEF6Q8TEU7 1601 aa24.45■■□□□ 1.5
CLIC1-206ENST00000375779 NUP153P49790 1475 aaKnown RBP24.43■■□□□ 1.5
CLIC1-206ENST00000375779 PHLDB1Q86UU1 1377 aa24.4■■□□□ 1.5
CLIC1-206ENST00000375779 ARAP3Q8WWN8 1544 aa24.4■■□□□ 1.5
CLIC1-206ENST00000375779 ABCA9Q8IUA7 1624 aa24.39■■□□□ 1.5
CLIC1-206ENST00000375779 FHOD3Q2V2M9 1422 aa24.39■■□□□ 1.5
CLIC1-206ENST00000375779 EFCAB5A4FU69 1503 aa24.38■■□□□ 1.49
CLIC1-206ENST00000375779 ARID3CA6NKF2 412 aa24.36■■□□□ 1.49
CLIC1-206ENST00000375779 PLEKHD1A6NEE1 506 aa24.29■■□□□ 1.48
CLIC1-206ENST00000375779 RANGAP1P46060 587 aaPredicted RBP24.29■■□□□ 1.48
CLIC1-206ENST00000375779 ADGRL1O94910 1474 aa24.28■■□□□ 1.48
CLIC1-206ENST00000375779 NEO1Q92859 1461 aa24.27■■□□□ 1.48
CLIC1-206ENST00000375779 UBTFP17480 764 aaKnown RBP24.25■■□□□ 1.47
CLIC1-206ENST00000375779 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.24■■□□□ 1.47
CLIC1-206ENST00000375779 HNRNPUL2Q1KMD3 747 aaKnown RBP24.24■■□□□ 1.47
CLIC1-206ENST00000375779 ARHGAP35Q9NRY4 1499 aa24.23■■□□□ 1.47
CLIC1-206ENST00000375779 FMN1Q68DA7 1419 aa24.18■■□□□ 1.46
CLIC1-206ENST00000375779 PHF23Q9BUL5 403 aaPredicted RBP24.18■■□□□ 1.46
CLIC1-206ENST00000375779 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.17■■□□□ 1.462e-10■■□□□ 14
CLIC1-206ENST00000375779 RAPGEF3O95398 923 aa24.17■■□□□ 1.46
CLIC1-206ENST00000375779 CDK13Q14004 1512 aaKnown RBP24.11■■□□□ 1.45
CLIC1-206ENST00000375779 FRMPD1Q5SYB0 1578 aa24.11■■□□□ 1.45
CLIC1-206ENST00000375779 AKNAQ7Z591 1439 aa24.1■■□□□ 1.45
CLIC1-206ENST00000375779 PLCH2O75038 1416 aa24.08■■□□□ 1.44
CLIC1-206ENST00000375779 FANCAO15360 1455 aa24.07■■□□□ 1.44
CLIC1-206ENST00000375779 EHMT2Q96KQ7 1210 aa24.07■■□□□ 1.44
CLIC1-206ENST00000375779 TTC37Q6PGP7 1564 aa24.06■■□□□ 1.44
CLIC1-206ENST00000375779 DENND4BO75064 1496 aaPredicted RBP24.06■■□□□ 1.44
CLIC1-206ENST00000375779 HECW1Q76N89 1606 aa24.05■■□□□ 1.44
CLIC1-206ENST00000375779 CDK11AQ9UQ88 783 aaPredicted RBP24.04■■□□□ 1.44
CLIC1-206ENST00000375779 RICTORQ6R327 1708 aa24.04■■□□□ 1.44
CLIC1-206ENST00000375779 CFAP74Q9C0B2 1584 aa24.01■■□□□ 1.43
CLIC1-206ENST00000375779 ADAMTSL3P82987 1691 aa24■■□□□ 1.43
CLIC1-206ENST00000375779 TROQ12816 1431 aaPredicted RBP23.99■■□□□ 1.43
CLIC1-206ENST00000375779 ZMYM4Q5VZL5 1548 aa23.98■■□□□ 1.43
CLIC1-206ENST00000375779 LRRIQ1Q96JM4 1722 aa23.98■■□□□ 1.43
CLIC1-206ENST00000375779 CASKIN1Q8WXD9 1431 aa23.97■■□□□ 1.43
CLIC1-206ENST00000375779 MAGI2Q86UL8 1455 aa23.96■■□□□ 1.43
CLIC1-206ENST00000375779 EFCAB2Q5VUJ9 269 aa23.96■■□□□ 1.43
CLIC1-206ENST00000375779 ATP1B4Q9UN42 357 aaPredicted RBP23.95■■□□□ 1.42
CLIC1-206ENST00000375779 SCAPERQ9BY12 1400 aa23.93■■□□□ 1.42
CLIC1-206ENST00000375779 BCORL1Q5H9F3 1711 aa23.92■■□□□ 1.42
CLIC1-206ENST00000375779 ARHGEF40Q8TER5 1519 aa23.91■■□□□ 1.42
CLIC1-206ENST00000375779 PTPRMP28827 1452 aa23.9■■□□□ 1.42
CLIC1-206ENST00000375779 KIF14Q15058 1648 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms