RNA–Protein interactions for RNA: ENST00000375642.6

C6orf48-207, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-207ENST00000375642 CEP170Q5SW79 1584 aa29.2■■■□□ 2.26
C6orf48-207ENST00000375642 CSRNP3Q8WYN3 585 aa29.11■■■□□ 2.25
C6orf48-207ENST00000375642 EEA1Q15075 1411 aa29.11■■■□□ 2.25
C6orf48-207ENST00000375642 RAPGEF2Q9Y4G8 1499 aa29.1■■■□□ 2.25
C6orf48-207ENST00000375642 FAM9AQ8IZU1 332 aaPredicted RBP29.06■■■□□ 2.24
C6orf48-207ENST00000375642 JPH4Q96JJ6 628 aa29.03■■■□□ 2.24
C6orf48-207ENST00000375642 KIAA0586Q9BVV6 1533 aa29.03■■■□□ 2.24
C6orf48-207ENST00000375642 PRXQ9BXM0 1461 aa29.03■■■□□ 2.24
C6orf48-207ENST00000375642 SHROOM2Q13796 1616 aa28.95■■■□□ 2.23
C6orf48-207ENST00000375642 PRG4Q92954 1404 aaPredicted RBP28.93■■■□□ 2.22
C6orf48-207ENST00000375642 ERCC6L2Q5T890 1561 aa28.88■■■□□ 2.21
C6orf48-207ENST00000375642 IQGAP2Q13576 1575 aa28.84■■■□□ 2.21
C6orf48-207ENST00000375642 CARMIL2Q6F5E8 1435 aa28.75■■■□□ 2.19
C6orf48-207ENST00000375642 KIF21BO75037 1637 aa28.72■■■□□ 2.19
C6orf48-207ENST00000375642 CTTNBP2Q8WZ74 1663 aa28.7■■■□□ 2.19
C6orf48-207ENST00000375642 UGGT2Q9NYU1 1516 aa28.7■■■□□ 2.19
C6orf48-207ENST00000375642 EHMT2Q96KQ7 1210 aa28.67■■■□□ 2.18
C6orf48-207ENST00000375642 DISP1Q96F81 1524 aa28.65■■■□□ 2.18
C6orf48-207ENST00000375642 TNIKQ9UKE5 1360 aa28.63■■■□□ 2.17
C6orf48-207ENST00000375642 UBTFP17480 764 aaKnown RBP28.63■■■□□ 2.17
C6orf48-207ENST00000375642 PTPRGP23470 1445 aa28.62■■■□□ 2.17
C6orf48-207ENST00000375642 GOLGA3Q08378 1498 aa28.62■■■□□ 2.17
C6orf48-207ENST00000375642 TTBK1Q5TCY1 1321 aaPredicted RBP28.62■■■□□ 2.17
C6orf48-207ENST00000375642 KIF13AQ9H1H9 1805 aa28.57■■■□□ 2.16
C6orf48-207ENST00000375642 KIAA0556O60303 1618 aa28.54■■■□□ 2.16
C6orf48-207ENST00000375642 RANGAP1P46060 587 aaPredicted RBP28.53■■■□□ 2.16
C6orf48-207ENST00000375642 P3H3Q8IVL6 736 aa28.48■■■□□ 2.15
C6orf48-207ENST00000375642 NPM1P06748 294 aaKnown RBP eCLIP28.45■■■□□ 2.14
C6orf48-207ENST00000375642 FAM69CQ0P6D2 419 aa28.43■■■□□ 2.14
C6orf48-207ENST00000375642 ABCC10Q5T3U5 1492 aa28.41■■■□□ 2.14
C6orf48-207ENST00000375642 UACAQ9BZF9 1416 aa28.41■■■□□ 2.14
C6orf48-207ENST00000375642 ADCY10Q96PN6 1610 aa28.4■■■□□ 2.14
C6orf48-207ENST00000375642 SAMD9Q5K651 1589 aa28.39■■■□□ 2.14
C6orf48-207ENST00000375642 MAPKBP1O60336 1514 aa28.37■■■□□ 2.13
C6orf48-207ENST00000375642 UHRF1BP1LA0JNW5 1464 aa28.34■■■□□ 2.13
C6orf48-207ENST00000375642 EFCAB5A4FU69 1503 aa28.33■■■□□ 2.13
C6orf48-207ENST00000375642 DIP2BQ9P265 1576 aa28.33■■■□□ 2.12
C6orf48-207ENST00000375642 PLB1Q6P1J6 1458 aa28.31■■■□□ 2.12
C6orf48-207ENST00000375642 ABCC2Q92887 1545 aa28.31■■■□□ 2.12
C6orf48-207ENST00000375642 FHOD3Q2V2M9 1422 aa28.3■■■□□ 2.12
C6orf48-207ENST00000375642 KDM6BO15054 1643 aa28.29■■■□□ 2.12
C6orf48-207ENST00000375642 ABCA8O94911 1581 aa28.24■■■□□ 2.11
C6orf48-207ENST00000375642 ARHGAP35Q9NRY4 1499 aa28.22■■■□□ 2.11
C6orf48-207ENST00000375642 KDM5BQ9UGL1 1544 aa28.21■■■□□ 2.11
C6orf48-207ENST00000375642 LOC105371045A0A1W2PR82 267 aa28.2■■■□□ 2.1
C6orf48-207ENST00000375642 KDM4FA0A1W2PPD8 638 aa28.17■■■□□ 2.1
C6orf48-207ENST00000375642 CLIP1P30622 1438 aa28.14■■■□□ 2.1
C6orf48-207ENST00000375642 TSPOAP1O95153 1857 aa28.12■■■□□ 2.09
C6orf48-207ENST00000375642 ASXL2Q76L83 1435 aa28.12■■■□□ 2.09
C6orf48-207ENST00000375642 ARID3CA6NKF2 412 aa28.12■■■□□ 2.09
C6orf48-207ENST00000375642 FMN1Q68DA7 1419 aa28.11■■■□□ 2.09
C6orf48-207ENST00000375642 RAPGEF6Q8TEU7 1601 aa28.1■■■□□ 2.09
C6orf48-207ENST00000375642 ZCCHC11Q5TAX3 1644 aaKnown RBP28.1■■■□□ 2.09
C6orf48-207ENST00000375642 ATP10BO94823 1461 aa28.06■■■□□ 2.08
C6orf48-207ENST00000375642 NUP153P49790 1475 aaKnown RBP28.04■■■□□ 2.08
C6orf48-207ENST00000375642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.04■■■□□ 2.08
C6orf48-207ENST00000375642 HNRNPUL2Q1KMD3 747 aaKnown RBP28.04■■■□□ 2.08
C6orf48-207ENST00000375642 CEP162Q5TB80 1403 aa28.03■■■□□ 2.08
C6orf48-207ENST00000375642 ATP1B4Q9UN42 357 aaPredicted RBP28.02■■■□□ 2.08
C6orf48-207ENST00000375642 ILDR1Q86SU0 546 aaPredicted RBP28■■■□□ 2.07
C6orf48-207ENST00000375642 WDR7Q9Y4E6 1490 aa27.99■■■□□ 2.07
C6orf48-207ENST00000375642 KCNH8Q96L42 1107 aa27.95■■■□□ 2.06
C6orf48-207ENST00000375642 EPRSP07814 1512 aaKnown RBP27.94■■■□□ 2.06
C6orf48-207ENST00000375642 PLEKHD1A6NEE1 506 aa27.91■■■□□ 2.06
C6orf48-207ENST00000375642 HECW1Q76N89 1606 aa27.9■■■□□ 2.06
C6orf48-207ENST00000375642 CASKIN1Q8WXD9 1431 aa27.9■■■□□ 2.06
C6orf48-207ENST00000375642 GLI2P10070 1586 aa27.9■■■□□ 2.06
C6orf48-207ENST00000375642 ADGRL1O94910 1474 aa27.89■■■□□ 2.06
C6orf48-207ENST00000375642 CDK13Q14004 1512 aaKnown RBP27.85■■■□□ 2.05
C6orf48-207ENST00000375642 CDK11AQ9UQ88 783 aaPredicted RBP27.83■■■□□ 2.05
C6orf48-207ENST00000375642 PPRC1Q5VV67 1664 aaKnown RBP27.83■■■□□ 2.05
C6orf48-207ENST00000375642 PCF11O94913 1555 aaKnown RBP27.82■■■□□ 2.04
C6orf48-207ENST00000375642 FYCO1Q9BQS8 1478 aa27.82■■■□□ 2.04
C6orf48-207ENST00000375642 CCDC18Q5T9S5 1454 aa27.76■■■□□ 2.03
C6orf48-207ENST00000375642 TEX14Q8IWB6 1497 aa27.76■■■□□ 2.03
C6orf48-207ENST00000375642 CD109Q6YHK3 1445 aa27.75■■■□□ 2.03
C6orf48-207ENST00000375642 MAP3K4Q9Y6R4 1608 aa27.74■■■□□ 2.03
C6orf48-207ENST00000375642 HECW2Q9P2P5 1572 aa27.72■■■□□ 2.03
C6orf48-207ENST00000375642 CFAP43Q8NDM7 1665 aa27.68■■■□□ 2.02
C6orf48-207ENST00000375642 VPS8Q8N3P4 1428 aa27.68■■■□□ 2.02
C6orf48-207ENST00000375642 LRRIQ1Q96JM4 1722 aa27.68■■■□□ 2.02
C6orf48-207ENST00000375642 COL17A1Q9UMD9 1497 aaPredicted RBP27.67■■■□□ 2.02
C6orf48-207ENST00000375642 ABCA9Q8IUA7 1624 aa27.67■■■□□ 2.02
C6orf48-207ENST00000375642 TROQ12816 1431 aaPredicted RBP27.67■■■□□ 2.02
C6orf48-207ENST00000375642 MAGI3Q5TCQ9 1506 aa27.66■■■□□ 2.02
C6orf48-207ENST00000375642 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.59■■■□□ 2.01
C6orf48-207ENST00000375642 KIF14Q15058 1648 aa27.54■■■□□ 2
C6orf48-207ENST00000375642 MTUS2Q5JR59 1369 aa27.54■■■□□ 2
C6orf48-207ENST00000375642 TTC37Q6PGP7 1564 aa27.53■■■□□ 2
C6orf48-207ENST00000375642 PHLDB1Q86UU1 1377 aa27.5■■□□□ 1.99
C6orf48-207ENST00000375642 PLCH2O75038 1416 aa27.49■■□□□ 1.99
C6orf48-207ENST00000375642 NEO1Q92859 1461 aa27.48■■□□□ 1.99
C6orf48-207ENST00000375642 APLP2Q06481 763 aa27.45■■□□□ 1.98
C6orf48-207ENST00000375642 FANCAO15360 1455 aa27.44■■□□□ 1.98
C6orf48-207ENST00000375642 EFCAB2Q5VUJ9 269 aa27.44■■□□□ 1.98
C6orf48-207ENST00000375642 TIAM1Q13009 1591 aa27.43■■□□□ 1.98
C6orf48-207ENST00000375642 EHBP1L1Q8N3D4 1523 aa27.41■■□□□ 1.98
C6orf48-207ENST00000375642 ARAP3Q8WWN8 1544 aa27.41■■□□□ 1.98
C6orf48-207ENST00000375642 MAP3K1Q13233 1512 aa27.41■■□□□ 1.98
C6orf48-207ENST00000375642 AKNAQ7Z591 1439 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms