RNA–Protein interactions for RNA: ENST00000375433.3

RCC2-201, Transcript of regulator of chromosome condensation 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCC2, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC2-201ENST00000375433 ERCC6Q03468 1493 aa34.71■■■■□ 3.15
RCC2-201ENST00000375433 EFCAB5A4FU69 1503 aa34.7■■■■□ 3.15
RCC2-201ENST00000375433 GAPVD1Q14C86 1478 aa34.7■■■■□ 3.14
RCC2-201ENST00000375433 TDRD9Q8NDG6 1382 aaKnown RBP34.69■■■■□ 3.14
RCC2-201ENST00000375433 TARBP1Q13395 1621 aaKnown RBP34.68■■■■□ 3.14
RCC2-201ENST00000375433 WDR62O43379 1518 aa34.66■■■■□ 3.14
RCC2-201ENST00000375433 CCNB3Q8WWL7 1395 aa34.59■■■■□ 3.13
RCC2-201ENST00000375433 PCF11O94913 1555 aaKnown RBP34.58■■■■□ 3.13
RCC2-201ENST00000375433 LRRC9Q6ZRR7 1453 aa34.57■■■■□ 3.12
RCC2-201ENST00000375433 FHOD3Q2V2M9 1422 aa34.56■■■■□ 3.12
RCC2-201ENST00000375433 THOC2Q8NI27 1593 aaKnown RBP34.55■■■■□ 3.12
RCC2-201ENST00000375433 CFAP43Q8NDM7 1665 aa34.55■■■■□ 3.12
RCC2-201ENST00000375433 P3H3Q8IVL6 736 aa34.54■■■■□ 3.12
RCC2-201ENST00000375433 AQRO60306 1485 aaKnown RBP eCLIP34.52■■■■□ 3.122e-8■■■■□ 22.8
RCC2-201ENST00000375433 FYCO1Q9BQS8 1478 aa34.52■■■■□ 3.12
RCC2-201ENST00000375433 CASKIN1Q8WXD9 1431 aa34.48■■■■□ 3.11
RCC2-201ENST00000375433 FMN1Q68DA7 1419 aa34.43■■■■□ 3.1
RCC2-201ENST00000375433 IFT140Q96RY7 1462 aa34.42■■■■□ 3.1
RCC2-201ENST00000375433 CLSPNQ9HAW4 1339 aa34.42■■■■□ 3.1
RCC2-201ENST00000375433 SAMD9Q5K651 1589 aa34.42■■■■□ 3.1
RCC2-201ENST00000375433 PBRM1Q86U86 1689 aa34.39■■■■□ 3.1
RCC2-201ENST00000375433 DHX57Q6P158 1386 aaKnown RBP34.37■■■■□ 3.09
RCC2-201ENST00000375433 ZNF608Q9ULD9 1512 aaPredicted RBP34.34■■■■□ 3.09
RCC2-201ENST00000375433 PHLDB1Q86UU1 1377 aa34.34■■■■□ 3.09
RCC2-201ENST00000375433 ATP1B4Q9UN42 357 aaPredicted RBP34.34■■■■□ 3.09
RCC2-201ENST00000375433 SNAPC4Q5SXM2 1469 aa34.32■■■■□ 3.08
RCC2-201ENST00000375433 DIEXFQ68CQ4 756 aaKnown RBP34.29■■■■□ 3.08
RCC2-201ENST00000375433 ZNF316A6NFI3 1004 aaPredicted RBP34.28■■■■□ 3.08
RCC2-201ENST00000375433 ADAMTS12P58397 1594 aa34.26■■■■□ 3.08
RCC2-201ENST00000375433 GRIN2BQ13224 1484 aa34.24■■■■□ 3.07
RCC2-201ENST00000375433 ITGAEP38570 1179 aa34.22■■■■□ 3.07
RCC2-201ENST00000375433 EIF4G3O43432 1585 aaKnown RBP34.21■■■■□ 3.07
RCC2-201ENST00000375433 IQGAP2Q13576 1575 aa34.13■■■■□ 3.05
RCC2-201ENST00000375433 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.12■■■■□ 3.055e-6■■■■■ 46.2
RCC2-201ENST00000375433 RAB3GAP2Q9H2M9 1393 aa34.11■■■■□ 3.05
RCC2-201ENST00000375433 FAM50AQ14320 339 aaKnown RBP34.1■■■■□ 3.05
RCC2-201ENST00000375433 LRRIQ1Q96JM4 1722 aa34.09■■■■□ 3.05
RCC2-201ENST00000375433 SETD5Q9C0A6 1442 aa34.08■■■■□ 3.05
RCC2-201ENST00000375433 MTUS2Q5JR59 1369 aa34.07■■■■□ 3.05
RCC2-201ENST00000375433 FGD6Q6ZV73 1430 aa34■■■■□ 3.03
RCC2-201ENST00000375433 CCDC18Q5T9S5 1454 aa33.98■■■■□ 3.03
RCC2-201ENST00000375433 EHBP1L1Q8N3D4 1523 aa33.97■■■■□ 3.03
RCC2-201ENST00000375433 UGGT2Q9NYU1 1516 aa33.96■■■■□ 3.03
RCC2-201ENST00000375433 HECW1Q76N89 1606 aa33.94■■■■□ 3.02
RCC2-201ENST00000375433 SUPT6HQ7KZ85 1726 aaKnown RBP33.93■■■■□ 3.02
RCC2-201ENST00000375433 NCOA2Q15596 1464 aa33.92■■■■□ 3.02
RCC2-201ENST00000375433 MAGI1Q96QZ7 1491 aaPredicted RBP33.9■■■■□ 3.02
RCC2-201ENST00000375433 MAPKBP1O60336 1514 aa33.9■■■■□ 3.02
RCC2-201ENST00000375433 KIAA0586Q9BVV6 1533 aa33.89■■■■□ 3.02
RCC2-201ENST00000375433 MYOM3Q5VTT5 1437 aa33.87■■■■□ 3.01
RCC2-201ENST00000375433 GRIN2AQ12879 1464 aa33.86■■■■□ 3.01
RCC2-201ENST00000375433 ARHGEF11O15085 1522 aa33.83■■■■□ 3.01
RCC2-201ENST00000375433 MAGI3Q5TCQ9 1506 aa33.82■■■■□ 3
RCC2-201ENST00000375433 EPRSP07814 1512 aaKnown RBP33.81■■■■□ 3
RCC2-201ENST00000375433 SYNJ2O15056 1496 aa33.8■■■■□ 3
RCC2-201ENST00000375433 KIAA0556O60303 1618 aa33.77■■■■□ 3
RCC2-201ENST00000375433 DISP1Q96F81 1524 aa33.75■■■□□ 2.99
RCC2-201ENST00000375433 CHMP7Q8WUX9 453 aaPredicted RBP33.74■■■□□ 2.99
RCC2-201ENST00000375433 PTPN23Q9H3S7 1636 aa33.71■■■□□ 2.99
RCC2-201ENST00000375433 FBLN2P98095 1184 aa33.7■■■□□ 2.99
RCC2-201ENST00000375433 CDK13Q14004 1512 aaKnown RBP33.69■■■□□ 2.98
RCC2-201ENST00000375433 HFM1A2PYH4 1435 aa33.69■■■□□ 2.98
RCC2-201ENST00000375433 PTPRKQ15262 1439 aa33.69■■■□□ 2.98
RCC2-201ENST00000375433 CEP170Q5SW79 1584 aa33.67■■■□□ 2.98
RCC2-201ENST00000375433 TCOF1Q13428 1488 aaKnown RBP33.64■■■□□ 2.98
RCC2-201ENST00000375433 MIER1Q8N108 512 aa33.58■■■□□ 2.97
RCC2-201ENST00000375433 RAPGEF6Q8TEU7 1601 aa33.57■■■□□ 2.97
RCC2-201ENST00000375433 CENPBP07199 599 aaPredicted RBP33.57■■■□□ 2.96
RCC2-201ENST00000375433 ACIN1Q9UKV3 1341 aaKnown RBP33.57■■■□□ 2.96
RCC2-201ENST00000375433 MIA2Q96PC5 1412 aa33.57■■■□□ 2.96
RCC2-201ENST00000375433 NAIPQ13075 1403 aa33.56■■■□□ 2.96
RCC2-201ENST00000375433 NUP160Q12769 1436 aa33.56■■■□□ 2.96
RCC2-201ENST00000375433 NUP153P49790 1475 aaKnown RBP33.55■■■□□ 2.96
RCC2-201ENST00000375433 TIMELESSQ9UNS1 1208 aa33.55■■■□□ 2.96
RCC2-201ENST00000375433 UACAQ9BZF9 1416 aa33.53■■■□□ 2.96
RCC2-201ENST00000375433 SCAF1Q9H7N4 1312 aaKnown RBP33.52■■■□□ 2.96
RCC2-201ENST00000375433 SIN3AQ96ST3 1273 aa33.52■■■□□ 2.96
RCC2-201ENST00000375433 ARID3CA6NKF2 412 aa33.49■■■□□ 2.95
RCC2-201ENST00000375433 NEUROD1Q13562 356 aa33.48■■■□□ 2.95
RCC2-201ENST00000375433 CHD1O14646 1710 aa33.47■■■□□ 2.95
RCC2-201ENST00000375433 AKNAQ7Z591 1439 aa33.44■■■□□ 2.94
RCC2-201ENST00000375433 CARMIL2Q6F5E8 1435 aa33.44■■■□□ 2.94
RCC2-201ENST00000375433 CDK11AQ9UQ88 783 aaPredicted RBP33.43■■■□□ 2.94
RCC2-201ENST00000375433 GCC2Q8IWJ2 1684 aa33.41■■■□□ 2.94
RCC2-201ENST00000375433 JPH4Q96JJ6 628 aa33.39■■■□□ 2.94
RCC2-201ENST00000375433 PLB1Q6P1J6 1458 aa33.34■■■□□ 2.93
RCC2-201ENST00000375433 CHIC2Q9UKJ5 165 aa33.32■■■□□ 2.92
RCC2-201ENST00000375433 RRP7BPQ9NSQ0 103 aa33.31■■■□□ 2.92
RCC2-201ENST00000375433 TROQ12816 1431 aaPredicted RBP33.31■■■□□ 2.92
RCC2-201ENST00000375433 PPP1R15AO75807 674 aaPredicted RBP33.28■■■□□ 2.92
RCC2-201ENST00000375433 DAPK1P53355 1430 aa33.25■■■□□ 2.91
RCC2-201ENST00000375433 PRG4Q92954 1404 aaPredicted RBP33.25■■■□□ 2.91
RCC2-201ENST00000375433 DNMT1P26358 1616 aaKnown RBP33.25■■■□□ 2.91
RCC2-201ENST00000375433 YTHDC1Q96MU7 727 aaKnown RBP33.24■■■□□ 2.91
RCC2-201ENST00000375433 TONSLQ96HA7 1378 aa33.24■■■□□ 2.91
RCC2-201ENST00000375433 ROCK1Q13464 1354 aa33.23■■■□□ 2.91
RCC2-201ENST00000375433 ADCY10Q96PN6 1610 aa33.22■■■□□ 2.91
RCC2-201ENST00000375433 KDM6BO15054 1643 aa33.19■■■□□ 2.9
RCC2-201ENST00000375433 ABCA8O94911 1581 aa33.19■■■□□ 2.9
RCC2-201ENST00000375433 ITSN2Q9NZM3 1697 aa33.19■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms