RNA–Protein interactions for RNA: ENST00000375238.8

NECAB3-202, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB3, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-202ENST00000375238 ARAP1Q96P48 1450 aa30.14■■■□□ 2.42
NECAB3-202ENST00000375238 SNAPC4Q5SXM2 1469 aa30.13■■■□□ 2.41
NECAB3-202ENST00000375238 ARHGAP35Q9NRY4 1499 aa30.13■■■□□ 2.41
NECAB3-202ENST00000375238 PPARGC1BQ86YN6 1023 aaKnown RBP30.1■■■□□ 2.41
NECAB3-202ENST00000375238 MAGI1Q96QZ7 1491 aaPredicted RBP30.05■■■□□ 2.4
NECAB3-202ENST00000375238 EFCAB5A4FU69 1503 aa29.97■■■□□ 2.39
NECAB3-202ENST00000375238 GRIN2AQ12879 1464 aa29.95■■■□□ 2.38
NECAB3-202ENST00000375238 SYNJ2O15056 1496 aa29.94■■■□□ 2.38
NECAB3-202ENST00000375238 APLP2Q06481 763 aa29.9■■■□□ 2.38
NECAB3-202ENST00000375238 IQGAP2Q13576 1575 aa29.89■■■□□ 2.38
NECAB3-202ENST00000375238 P3H3Q8IVL6 736 aa29.89■■■□□ 2.38
NECAB3-202ENST00000375238 CHMP7Q8WUX9 453 aaPredicted RBP29.88■■■□□ 2.37
NECAB3-202ENST00000375238 TTBK1Q5TCY1 1321 aaPredicted RBP29.87■■■□□ 2.37
NECAB3-202ENST00000375238 SAMD9Q5K651 1589 aa29.85■■■□□ 2.37
NECAB3-202ENST00000375238 FHOD3Q2V2M9 1422 aa29.85■■■□□ 2.37
NECAB3-202ENST00000375238 FBLN2P98095 1184 aa29.84■■■□□ 2.37
NECAB3-202ENST00000375238 ZEB1P37275 1124 aaPredicted RBP29.82■■■□□ 2.36
NECAB3-202ENST00000375238 KIAA0586Q9BVV6 1533 aa29.79■■■□□ 2.36
NECAB3-202ENST00000375238 CEP170Q5SW79 1584 aa29.77■■■□□ 2.36
NECAB3-202ENST00000375238 PCF11O94913 1555 aaKnown RBP29.73■■■□□ 2.35
NECAB3-202ENST00000375238 UGGT2Q9NYU1 1516 aa29.71■■■□□ 2.35
NECAB3-202ENST00000375238 NUP160Q12769 1436 aa29.7■■■□□ 2.35
NECAB3-202ENST00000375238 FMN1Q68DA7 1419 aa29.7■■■□□ 2.34
NECAB3-202ENST00000375238 CHD1O14646 1710 aa29.67■■■□□ 2.34
NECAB3-202ENST00000375238 FYCO1Q9BQS8 1478 aa29.64■■■□□ 2.34
NECAB3-202ENST00000375238 CASKIN1Q8WXD9 1431 aa29.63■■■□□ 2.33
NECAB3-202ENST00000375238 TIAM1Q13009 1591 aa29.61■■■□□ 2.33
NECAB3-202ENST00000375238 ATP1B4Q9UN42 357 aaPredicted RBP29.61■■■□□ 2.33
NECAB3-202ENST00000375238 MAP3K1Q13233 1512 aa29.6■■■□□ 2.33
NECAB3-202ENST00000375238 KANK4Q5T7N3 995 aaPredicted RBP29.59■■■□□ 2.33
NECAB3-202ENST00000375238 KIAA0556O60303 1618 aa29.59■■■□□ 2.33
NECAB3-202ENST00000375238 DISP1Q96F81 1524 aa29.57■■■□□ 2.32
NECAB3-202ENST00000375238 CFAP43Q8NDM7 1665 aa29.56■■■□□ 2.32
NECAB3-202ENST00000375238 JPH4Q96JJ6 628 aa29.49■■■□□ 2.31
NECAB3-202ENST00000375238 LRRC9Q6ZRR7 1453 aa29.46■■■□□ 2.31
NECAB3-202ENST00000375238 LRRIQ1Q96JM4 1722 aa29.45■■■□□ 2.3
NECAB3-202ENST00000375238 CARMIL2Q6F5E8 1435 aa29.44■■■□□ 2.3
NECAB3-202ENST00000375238 HECW1Q76N89 1606 aa29.41■■■□□ 2.3
NECAB3-202ENST00000375238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.39■■■□□ 2.3
NECAB3-202ENST00000375238 CCDC18Q5T9S5 1454 aa29.34■■■□□ 2.29
NECAB3-202ENST00000375238 PRG4Q92954 1404 aaPredicted RBP29.32■■■□□ 2.28
NECAB3-202ENST00000375238 RAPGEF6Q8TEU7 1601 aa29.32■■■□□ 2.28
NECAB3-202ENST00000375238 SHROOM2Q13796 1616 aa29.31■■■□□ 2.28
NECAB3-202ENST00000375238 CCER1Q8TC90 406 aaPredicted RBP29.3■■■□□ 2.28
NECAB3-202ENST00000375238 EPRSP07814 1512 aaKnown RBP29.28■■■□□ 2.28
NECAB3-202ENST00000375238 MTUS2Q5JR59 1369 aa29.27■■■□□ 2.28
NECAB3-202ENST00000375238 CLASP1Q7Z460 1538 aa29.27■■■□□ 2.28
NECAB3-202ENST00000375238 RRBP1Q9P2E9 1410 aaKnown RBP29.24■■■□□ 2.27
NECAB3-202ENST00000375238 CDK13Q14004 1512 aaKnown RBP29.24■■■□□ 2.27
NECAB3-202ENST00000375238 NUP153P49790 1475 aaKnown RBP29.22■■■□□ 2.27
NECAB3-202ENST00000375238 PLB1Q6P1J6 1458 aa29.22■■■□□ 2.27
NECAB3-202ENST00000375238 EHBP1L1Q8N3D4 1523 aa29.21■■■□□ 2.27
NECAB3-202ENST00000375238 ARID3CA6NKF2 412 aa29.21■■■□□ 2.27
NECAB3-202ENST00000375238 PHLDB1Q86UU1 1377 aa29.19■■■□□ 2.26
NECAB3-202ENST00000375238 MAGI3Q5TCQ9 1506 aa29.17■■■□□ 2.26
NECAB3-202ENST00000375238 HNRNPUL2Q1KMD3 747 aaKnown RBP29.17■■■□□ 2.26
NECAB3-202ENST00000375238 CCNB3Q8WWL7 1395 aa29.17■■■□□ 2.26
NECAB3-202ENST00000375238 SUPT6HQ7KZ85 1726 aaKnown RBP29.16■■■□□ 2.26
NECAB3-202ENST00000375238 ABCA8O94911 1581 aa29.14■■■□□ 2.26
NECAB3-202ENST00000375238 PTPRGP23470 1445 aa29.14■■■□□ 2.26
NECAB3-202ENST00000375238 ERCC6L2Q5T890 1561 aa29.13■■■□□ 2.25
NECAB3-202ENST00000375238 NCOA2Q15596 1464 aa29.1■■■□□ 2.25
NECAB3-202ENST00000375238 CDK11AQ9UQ88 783 aaPredicted RBP29.02■■■□□ 2.24
NECAB3-202ENST00000375238 ARHGEF11O15085 1522 aa29.01■■■□□ 2.23
NECAB3-202ENST00000375238 FGD6Q6ZV73 1430 aa28.98■■■□□ 2.23
NECAB3-202ENST00000375238 FAM50AQ14320 339 aaKnown RBP28.98■■■□□ 2.23
NECAB3-202ENST00000375238 MYOM3Q5VTT5 1437 aa28.98■■■□□ 2.23
NECAB3-202ENST00000375238 OSCARQ8IYS5 282 aa28.98■■■□□ 2.23
NECAB3-202ENST00000375238 UACAQ9BZF9 1416 aa28.97■■■□□ 2.23
NECAB3-202ENST00000375238 ATP10BO94823 1461 aa28.95■■■□□ 2.22
NECAB3-202ENST00000375238 ITGAEP38570 1179 aa28.94■■■□□ 2.22
NECAB3-202ENST00000375238 TROQ12816 1431 aaPredicted RBP28.93■■■□□ 2.22
NECAB3-202ENST00000375238 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.9■■■□□ 2.225e-7■■■■■ 29.7
NECAB3-202ENST00000375238 ABCC2Q92887 1545 aa28.89■■■□□ 2.22
NECAB3-202ENST00000375238 ADCY10Q96PN6 1610 aa28.86■■■□□ 2.21
NECAB3-202ENST00000375238 PTPN23Q9H3S7 1636 aa28.86■■■□□ 2.21
NECAB3-202ENST00000375238 PLEKHD1A6NEE1 506 aa28.84■■■□□ 2.21
NECAB3-202ENST00000375238 KIF14Q15058 1648 aa28.83■■■□□ 2.21
NECAB3-202ENST00000375238 MIA2Q96PC5 1412 aa28.79■■■□□ 2.2
NECAB3-202ENST00000375238 UHRF1BP1LA0JNW5 1464 aa28.78■■■□□ 2.2
NECAB3-202ENST00000375238 TCOF1Q13428 1488 aaKnown RBP28.77■■■□□ 2.2
NECAB3-202ENST00000375238 ITSN2Q9NZM3 1697 aa28.75■■■□□ 2.19
NECAB3-202ENST00000375238 ZCCHC11Q5TAX3 1644 aaKnown RBP28.72■■■□□ 2.19
NECAB3-202ENST00000375238 KDM5BQ9UGL1 1544 aa28.68■■■□□ 2.18
NECAB3-202ENST00000375238 GPATCH8Q9UKJ3 1502 aaKnown RBP28.67■■■□□ 2.18
NECAB3-202ENST00000375238 ABCC10Q5T3U5 1492 aa28.67■■■□□ 2.18
NECAB3-202ENST00000375238 CDC42BPAQ5VT25 1732 aa28.65■■■□□ 2.18
NECAB3-202ENST00000375238 SETD5Q9C0A6 1442 aa28.65■■■□□ 2.18
NECAB3-202ENST00000375238 PTPRKQ15262 1439 aa28.64■■■□□ 2.18
NECAB3-202ENST00000375238 CFDP1Q9UEE9 299 aaPredicted RBP28.63■■■□□ 2.17
NECAB3-202ENST00000375238 RAB3GAP2Q9H2M9 1393 aa28.63■■■□□ 2.17
NECAB3-202ENST00000375238 ZNF644Q9H582 1327 aaPredicted RBP28.58■■■□□ 2.17
NECAB3-202ENST00000375238 CAMSAP2Q08AD1 1489 aa28.57■■■□□ 2.16
NECAB3-202ENST00000375238 DNMT1P26358 1616 aaKnown RBP28.55■■■□□ 2.16
NECAB3-202ENST00000375238 ZNF777Q9ULD5 760 aaPredicted RBP28.55■■■□□ 2.16
NECAB3-202ENST00000375238 DHX57Q6P158 1386 aaKnown RBP28.53■■■□□ 2.16
NECAB3-202ENST00000375238 TTC37Q6PGP7 1564 aa28.53■■■□□ 2.16
NECAB3-202ENST00000375238 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.52■■■□□ 2.162e-6■■■□□ 19
NECAB3-202ENST00000375238 HFM1A2PYH4 1435 aa28.52■■■□□ 2.16
NECAB3-202ENST00000375238 DAPK1P53355 1430 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms