RNA–Protein interactions for RNA: ENST00000374264.6

SUSD1-203, Transcript of sushi domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SUSD1, Length 2,754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-203ENST00000374264 ERCC6Q03468 1493 aa30.57■■■□□ 2.48
SUSD1-203ENST00000374264 ABCA5Q8WWZ7 1642 aa30.55■■■□□ 2.48
SUSD1-203ENST00000374264 TARBP1Q13395 1621 aaKnown RBP30.53■■■□□ 2.48
SUSD1-203ENST00000374264 CUL7Q14999 1698 aa30.53■■■□□ 2.48
SUSD1-203ENST00000374264 ZNF608Q9ULD9 1512 aaPredicted RBP30.52■■■□□ 2.48
SUSD1-203ENST00000374264 ARID3CA6NKF2 412 aa30.49■■■□□ 2.47
SUSD1-203ENST00000374264 FBLN2P98095 1184 aa30.43■■■□□ 2.46
SUSD1-203ENST00000374264 FAM50AQ14320 339 aaKnown RBP30.43■■■□□ 2.46
SUSD1-203ENST00000374264 PCF11O94913 1555 aaKnown RBP30.42■■■□□ 2.46
SUSD1-203ENST00000374264 FHAD1B1AJZ9 1412 aa30.41■■■□□ 2.46
SUSD1-203ENST00000374264 CTTNBP2Q8WZ74 1663 aa30.4■■■□□ 2.46
SUSD1-203ENST00000374264 CCNB3Q8WWL7 1395 aa30.38■■■□□ 2.45
SUSD1-203ENST00000374264 TIAM1Q13009 1591 aa30.38■■■□□ 2.45
SUSD1-203ENST00000374264 PHLDB1Q86UU1 1377 aa30.33■■■□□ 2.45
SUSD1-203ENST00000374264 LRRC9Q6ZRR7 1453 aa30.33■■■□□ 2.45
SUSD1-203ENST00000374264 PBRM1Q86U86 1689 aa30.3■■■□□ 2.44
SUSD1-203ENST00000374264 RRBP1Q9P2E9 1410 aaKnown RBP30.29■■■□□ 2.44
SUSD1-203ENST00000374264 GRIN2BQ13224 1484 aa30.27■■■□□ 2.44
SUSD1-203ENST00000374264 IFT140Q96RY7 1462 aa30.25■■■□□ 2.43
SUSD1-203ENST00000374264 WDR62O43379 1518 aa30.25■■■□□ 2.43
SUSD1-203ENST00000374264 EFCAB5A4FU69 1503 aa30.25■■■□□ 2.43
SUSD1-203ENST00000374264 CASKIN1Q8WXD9 1431 aa30.22■■■□□ 2.43
SUSD1-203ENST00000374264 FMN1Q68DA7 1419 aa30.22■■■□□ 2.43
SUSD1-203ENST00000374264 CHMP7Q8WUX9 453 aaPredicted RBP30.2■■■□□ 2.42
SUSD1-203ENST00000374264 SNAPC4Q5SXM2 1469 aa30.19■■■□□ 2.42
SUSD1-203ENST00000374264 MTUS2Q5JR59 1369 aa30.18■■■□□ 2.42
SUSD1-203ENST00000374264 FYCO1Q9BQS8 1478 aa30.17■■■□□ 2.42
SUSD1-203ENST00000374264 ADAMTS12P58397 1594 aa30.16■■■□□ 2.42
SUSD1-203ENST00000374264 MAP3K1Q13233 1512 aa30.11■■■□□ 2.41
SUSD1-203ENST00000374264 DHX57Q6P158 1386 aaKnown RBP30.11■■■□□ 2.41
SUSD1-203ENST00000374264 EIF4G3O43432 1585 aaKnown RBP30.11■■■□□ 2.41
SUSD1-203ENST00000374264 SAMD9Q5K651 1589 aa30.09■■■□□ 2.41
SUSD1-203ENST00000374264 IQGAP2Q13576 1575 aa30.07■■■□□ 2.4
SUSD1-203ENST00000374264 CFAP43Q8NDM7 1665 aa30.07■■■□□ 2.4
SUSD1-203ENST00000374264 THOC2Q8NI27 1593 aaKnown RBP30.07■■■□□ 2.4
SUSD1-203ENST00000374264 RAB3GAP2Q9H2M9 1393 aa30.04■■■□□ 2.4
SUSD1-203ENST00000374264 DIEXFQ68CQ4 756 aaKnown RBP30.03■■■□□ 2.4
SUSD1-203ENST00000374264 LRRIQ1Q96JM4 1722 aa30.01■■■□□ 2.39
SUSD1-203ENST00000374264 GRIN2AQ12879 1464 aa29.97■■■□□ 2.39
SUSD1-203ENST00000374264 ZNF316A6NFI3 1004 aaPredicted RBP29.95■■■□□ 2.38
SUSD1-203ENST00000374264 CDK13Q14004 1512 aaKnown RBP29.92■■■□□ 2.38
SUSD1-203ENST00000374264 CHIC2Q9UKJ5 165 aa29.9■■■□□ 2.38
SUSD1-203ENST00000374264 NCOA2Q15596 1464 aa29.88■■■□□ 2.37
SUSD1-203ENST00000374264 KIAA0586Q9BVV6 1533 aa29.88■■■□□ 2.37
SUSD1-203ENST00000374264 FGD6Q6ZV73 1430 aa29.87■■■□□ 2.37
SUSD1-203ENST00000374264 SETD5Q9C0A6 1442 aa29.87■■■□□ 2.37
SUSD1-203ENST00000374264 NEUROD1Q13562 356 aa29.87■■■□□ 2.37
SUSD1-203ENST00000374264 MAGI3Q5TCQ9 1506 aa29.87■■■□□ 2.37
SUSD1-203ENST00000374264 JPH4Q96JJ6 628 aa29.85■■■□□ 2.37
SUSD1-203ENST00000374264 SIN3AQ96ST3 1273 aa29.83■■■□□ 2.37
SUSD1-203ENST00000374264 DISP1Q96F81 1524 aa29.83■■■□□ 2.37
SUSD1-203ENST00000374264 EPRSP07814 1512 aaKnown RBP29.81■■■□□ 2.36
SUSD1-203ENST00000374264 SYNJ2O15056 1496 aa29.81■■■□□ 2.36
SUSD1-203ENST00000374264 MAGI1Q96QZ7 1491 aaPredicted RBP29.8■■■□□ 2.36
SUSD1-203ENST00000374264 CEP170Q5SW79 1584 aa29.79■■■□□ 2.36
SUSD1-203ENST00000374264 UGGT2Q9NYU1 1516 aa29.79■■■□□ 2.36
SUSD1-203ENST00000374264 RRP7BPQ9NSQ0 103 aa29.78■■■□□ 2.36
SUSD1-203ENST00000374264 PTPRKQ15262 1439 aa29.78■■■□□ 2.36
SUSD1-203ENST00000374264 MYOM3Q5VTT5 1437 aa29.75■■■□□ 2.35
SUSD1-203ENST00000374264 KIAA0556O60303 1618 aa29.73■■■□□ 2.35
SUSD1-203ENST00000374264 HECW1Q76N89 1606 aa29.72■■■□□ 2.35
SUSD1-203ENST00000374264 CLSPNQ9HAW4 1339 aa29.71■■■□□ 2.35
SUSD1-203ENST00000374264 PLB1Q6P1J6 1458 aa29.71■■■□□ 2.35
SUSD1-203ENST00000374264 SUPT6HQ7KZ85 1726 aaKnown RBP29.7■■■□□ 2.35
SUSD1-203ENST00000374264 CCDC18Q5T9S5 1454 aa29.69■■■□□ 2.34
SUSD1-203ENST00000374264 EHBP1L1Q8N3D4 1523 aa29.69■■■□□ 2.34
SUSD1-203ENST00000374264 ZNF644Q9H582 1327 aaPredicted RBP29.68■■■□□ 2.34
SUSD1-203ENST00000374264 NUP153P49790 1475 aaKnown RBP29.64■■■□□ 2.34
SUSD1-203ENST00000374264 MAPKBP1O60336 1514 aa29.63■■■□□ 2.33
SUSD1-203ENST00000374264 ZNF777Q9ULD5 760 aaPredicted RBP29.63■■■□□ 2.33
SUSD1-203ENST00000374264 PRG4Q92954 1404 aaPredicted RBP29.59■■■□□ 2.33
SUSD1-203ENST00000374264 PTPN23Q9H3S7 1636 aa29.58■■■□□ 2.33
SUSD1-203ENST00000374264 NUP160Q12769 1436 aa29.57■■■□□ 2.32
SUSD1-203ENST00000374264 CDK11AQ9UQ88 783 aaPredicted RBP29.57■■■□□ 2.32
SUSD1-203ENST00000374264 CARMIL2Q6F5E8 1435 aa29.57■■■□□ 2.32
SUSD1-203ENST00000374264 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.56■■■□□ 2.32
SUSD1-203ENST00000374264 TRIM52Q96A61 297 aa29.56■■■□□ 2.32
SUSD1-203ENST00000374264 MIER1Q8N108 512 aa29.55■■■□□ 2.32
SUSD1-203ENST00000374264 RAPGEF6Q8TEU7 1601 aa29.54■■■□□ 2.32
SUSD1-203ENST00000374264 YTHDC1Q96MU7 727 aaKnown RBP29.54■■■□□ 2.32
SUSD1-203ENST00000374264 ARHGEF11O15085 1522 aa29.49■■■□□ 2.31
SUSD1-203ENST00000374264 HIRIP3Q9BW71 556 aaPredicted RBP29.49■■■□□ 2.31
SUSD1-203ENST00000374264 NAIPQ13075 1403 aa29.49■■■□□ 2.31
SUSD1-203ENST00000374264 CFDP1Q9UEE9 299 aaPredicted RBP29.46■■■□□ 2.31
SUSD1-203ENST00000374264 HFM1A2PYH4 1435 aa29.46■■■□□ 2.31
SUSD1-203ENST00000374264 FOXD1Q16676 465 aa29.44■■■□□ 2.3
SUSD1-203ENST00000374264 PLEKHD1A6NEE1 506 aa29.41■■■□□ 2.3
SUSD1-203ENST00000374264 CHD1O14646 1710 aa29.37■■■□□ 2.29
SUSD1-203ENST00000374264 PTPRGP23470 1445 aa29.37■■■□□ 2.29
SUSD1-203ENST00000374264 TROQ12816 1431 aaPredicted RBP29.34■■■□□ 2.29
SUSD1-203ENST00000374264 MIA2Q96PC5 1412 aa29.33■■■□□ 2.29
SUSD1-203ENST00000374264 KIF14Q15058 1648 aa29.32■■■□□ 2.28
SUSD1-203ENST00000374264 KDM6BO15054 1643 aa29.32■■■□□ 2.28
SUSD1-203ENST00000374264 TCOF1Q13428 1488 aaKnown RBP29.32■■■□□ 2.28
SUSD1-203ENST00000374264 UACAQ9BZF9 1416 aa29.31■■■□□ 2.28
SUSD1-203ENST00000374264 ATP10BO94823 1461 aa29.29■■■□□ 2.28
SUSD1-203ENST00000374264 ABCC5O15440 1437 aa29.26■■■□□ 2.27
SUSD1-203ENST00000374264 DAPK1P53355 1430 aa29.26■■■□□ 2.27
SUSD1-203ENST00000374264 TONSLQ96HA7 1378 aa29.26■■■□□ 2.27
SUSD1-203ENST00000374264 KCNH8Q96L42 1107 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms