RNA–Protein interactions for RNA: ENST00000374001.6

A1CF-205, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene A1CF, Length 9,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-205ENST00000374001 GTF3C3Q9Y5Q9 886 aa7.11□□□□□ -1.27
A1CF-205ENST00000374001 CARMIL2Q6F5E8 1435 aa7.11□□□□□ -1.27
A1CF-205ENST00000374001 KIF21BO75037 1637 aa7.11□□□□□ -1.27
A1CF-205ENST00000374001 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.1□□□□□ -1.27
A1CF-205ENST00000374001 EIF5BO60841 1220 aaKnown RBP7.1□□□□□ -1.27
A1CF-205ENST00000374001 CANXP27824 592 aaKnown RBP7.1□□□□□ -1.27
A1CF-205ENST00000374001 ANP32AP39687 249 aaKnown RBP7.1□□□□□ -1.27
A1CF-205ENST00000374001 EIF4G2P78344 907 aaKnown RBP eCLIP7.1□□□□□ -1.27
A1CF-205ENST00000374001 HMGXB3Q12766 1538 aa7.09□□□□□ -1.27
A1CF-205ENST00000374001 ERICH3Q5RHP9 1530 aa7.08□□□□□ -1.28
A1CF-205ENST00000374001 CADPSQ9ULU8 1353 aa7.08□□□□□ -1.28
A1CF-205ENST00000374001 RAPGEF2Q9Y4G8 1499 aa7.08□□□□□ -1.28
A1CF-205ENST00000374001 UPF2Q9HAU5 1272 aaKnown RBP7.07□□□□□ -1.28
A1CF-205ENST00000374001 CCDC18Q5T9S5 1454 aa7.07□□□□□ -1.28
A1CF-205ENST00000374001 TMC1Q8TDI8 760 aa7.06□□□□□ -1.28
A1CF-205ENST00000374001 CFDP1Q9UEE9 299 aaPredicted RBP7.06□□□□□ -1.28
A1CF-205ENST00000374001 SOGA1O94964 1423 aa7.05□□□□□ -1.28
A1CF-205ENST00000374001 CUX1P39880 1505 aa7.05□□□□□ -1.28
A1CF-205ENST00000374001 STAG3Q9UJ98 1225 aa7.04□□□□□ -1.28
A1CF-205ENST00000374001 EIF4G1Q04637 1599 aaKnown RBP7.04□□□□□ -1.28
A1CF-205ENST00000374001 PRDM2Q13029 1718 aa7.04□□□□□ -1.28
A1CF-205ENST00000374001 SETD5Q9C0A6 1442 aa7.04□□□□□ -1.28
A1CF-205ENST00000374001 KANK1Q14678 1352 aa7.04□□□□□ -1.28
A1CF-205ENST00000374001 RSPH4AQ5TD94 716 aa7.04□□□□□ -1.28
A1CF-205ENST00000374001 NCAPD3P42695 1498 aa7.03□□□□□ -1.28
A1CF-205ENST00000374001 TOP2BQ02880 1626 aa7.02□□□□□ -1.29
A1CF-205ENST00000374001 ARID4BQ4LE39 1312 aaPredicted RBP7.02□□□□□ -1.29
A1CF-205ENST00000374001 WDR43Q15061 677 aaKnown RBP eCLIP7.02□□□□□ -1.29
A1CF-205ENST00000374001 HNRNPUQ00839 825 aaKnown RBP eCLIP7.02□□□□□ -1.29
A1CF-205ENST00000374001 BCANQ96GW7 911 aa7.02□□□□□ -1.29
A1CF-205ENST00000374001 CNGB1Q14028 1251 aaPredicted RBP7.01□□□□□ -1.29
A1CF-205ENST00000374001 EFCAB5A4FU69 1503 aa7□□□□□ -1.29
A1CF-205ENST00000374001 PEG3Q9GZU2 1588 aa7□□□□□ -1.29
A1CF-205ENST00000374001 DDX10Q13206 875 aaKnown RBP7□□□□□ -1.29
A1CF-205ENST00000374001 FANCD2Q9BXW9 1451 aa7□□□□□ -1.29
A1CF-205ENST00000374001 CUL7Q14999 1698 aa7□□□□□ -1.29
A1CF-205ENST00000374001 CHMP4BQ9H444 224 aaKnown RBP6.99□□□□□ -1.29
A1CF-205ENST00000374001 ARID3CA6NKF2 412 aa6.99□□□□□ -1.29
A1CF-205ENST00000374001 MRS2Q9HD23 443 aa6.99□□□□□ -1.29
A1CF-205ENST00000374001 CHIC2Q9UKJ5 165 aa6.98□□□□□ -1.29
A1CF-205ENST00000374001 ANP32BQ92688 251 aaKnown RBP6.98□□□□□ -1.29
A1CF-205ENST00000374001 ANP32EQ9BTT0 268 aa6.98□□□□□ -1.29
A1CF-205ENST00000374001 CFAP53Q96M91 514 aa6.97□□□□□ -1.29
A1CF-205ENST00000374001 PNNQ9H307 717 aaKnown RBP6.97□□□□□ -1.29
A1CF-205ENST00000374001 ERICH6BQ5W0A0 696 aa6.97□□□□□ -1.29
A1CF-205ENST00000374001 ANKRD30AQ9BXX3 1397 aa6.96□□□□□ -1.29
A1CF-205ENST00000374001 CCER2I3L3R5 266 aa6.96□□□□□ -1.29
A1CF-205ENST00000374001 KNSTRNQ9Y448 316 aa6.96□□□□□ -1.29
A1CF-205ENST00000374001 ROCK2O75116 1388 aaKnown RBP6.96□□□□□ -1.3
A1CF-205ENST00000374001 HDGFP51858 240 aaKnown RBP6.96□□□□□ -1.3
A1CF-205ENST00000374001 SUPT6HQ7KZ85 1726 aaKnown RBP6.96□□□□□ -1.3
A1CF-205ENST00000374001 CCDC136Q96JN2 1154 aa6.96□□□□□ -1.3
A1CF-205ENST00000374001 MS4A1P11836 297 aa6.96□□□□□ -1.3
A1CF-205ENST00000374001 MYH16Q9H6N6 1097 aa6.95□□□□□ -1.3
A1CF-205ENST00000374001 RRP7BPQ9NSQ0 103 aa6.95□□□□□ -1.3
A1CF-205ENST00000374001 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.95□□□□□ -1.32e-6■■□□□ 12.7
A1CF-205ENST00000374001 EIF3AQ14152 1382 aaKnown RBP6.95□□□□□ -1.3
A1CF-205ENST00000374001 CC2D2AQ9P2K1 1620 aa6.95□□□□□ -1.3
A1CF-205ENST00000374001 CFTRP13569 1480 aa6.95□□□□□ -1.3
A1CF-205ENST00000374001 GAPVD1Q14C86 1478 aa6.94□□□□□ -1.3
A1CF-205ENST00000374001 LAMC3Q9Y6N6 1575 aa6.94□□□□□ -1.3
A1CF-205ENST00000374001 FYCO1Q9BQS8 1478 aa6.94□□□□□ -1.3
A1CF-205ENST00000374001 FKBP8Q14318 412 aa6.94□□□□□ -1.3
A1CF-205ENST00000374001 CHGAP10645 457 aaKnown RBP6.94□□□□□ -1.3
A1CF-205ENST00000374001 HAP1P54257 671 aaPredicted RBP6.94□□□□□ -1.3
A1CF-205ENST00000374001 HSP90AA1P07900 732 aaKnown RBP6.93□□□□□ -1.3
A1CF-205ENST00000374001 DDRGK1Q96HY6 314 aa6.93□□□□□ -1.3
A1CF-205ENST00000374001 FGD5Q6ZNL6 1462 aa6.93□□□□□ -1.3
A1CF-205ENST00000374001 DNMBPQ6XZF7 1577 aa6.93□□□□□ -1.3
A1CF-205ENST00000374001 FAM9BQ8IZU0 186 aa6.93□□□□□ -1.3
A1CF-205ENST00000374001 UACAQ9BZF9 1416 aa6.92□□□□□ -1.3
A1CF-205ENST00000374001 CARD11Q9BXL7 1154 aa6.92□□□□□ -1.3
A1CF-205ENST00000374001 HECW1Q76N89 1606 aa6.92□□□□□ -1.3
A1CF-205ENST00000374001 CFAP44Q96MT7 982 aa6.92□□□□□ -1.3
A1CF-205ENST00000374001 PHLDB1Q86UU1 1377 aa6.92□□□□□ -1.3
A1CF-205ENST00000374001 BECN1Q14457 450 aa6.91□□□□□ -1.3
A1CF-205ENST00000374001 BIVM-ERCC5R4GMW8 1640 aa6.91□□□□□ -1.3
A1CF-205ENST00000374001 PPP1R15AO75807 674 aaPredicted RBP6.91□□□□□ -1.3
A1CF-205ENST00000374001 STAC3Q96MF2 364 aa6.91□□□□□ -1.3
A1CF-205ENST00000374001 TMF1P82094 1093 aa6.9□□□□□ -1.3
A1CF-205ENST00000374001 CHMP4AQ9BY43 222 aa6.9□□□□□ -1.3
A1CF-205ENST00000374001 NUDCQ9Y266 331 aa6.9□□□□□ -1.3
A1CF-205ENST00000374001 MIER1Q8N108 512 aa6.9□□□□□ -1.3
A1CF-205ENST00000374001 RAB3GAP2Q9H2M9 1393 aa6.9□□□□□ -1.3
A1CF-205ENST00000374001 KDM2AQ9Y2K7 1162 aa6.9□□□□□ -1.3
A1CF-205ENST00000374001 SYNJ1O43426 1573 aa6.9□□□□□ -1.31
A1CF-205ENST00000374001 KIF21AQ7Z4S6 1674 aa6.89□□□□□ -1.31
A1CF-205ENST00000374001 EFCAB2Q5VUJ9 269 aa6.89□□□□□ -1.31
A1CF-205ENST00000374001 CASKIN1Q8WXD9 1431 aa6.88□□□□□ -1.31
A1CF-205ENST00000374001 MYOM3Q5VTT5 1437 aa6.88□□□□□ -1.31
A1CF-205ENST00000374001 RALBP1Q15311 655 aa6.88□□□□□ -1.31
A1CF-205ENST00000374001 KCNH8Q96L42 1107 aa6.88□□□□□ -1.31
A1CF-205ENST00000374001 EHBP1L1Q8N3D4 1523 aa6.88□□□□□ -1.31
A1CF-205ENST00000374001 CTTNBP2Q8WZ74 1663 aa6.88□□□□□ -1.31
A1CF-205ENST00000374001 GRIN2BQ13224 1484 aa6.88□□□□□ -1.31
A1CF-205ENST00000374001 MAP3K1Q13233 1512 aa6.88□□□□□ -1.31
A1CF-205ENST00000374001 BICRAQ9NZM4 1560 aa6.86□□□□□ -1.31
A1CF-205ENST00000374001 KTN1Q86UP2 1357 aaKnown RBP6.86□□□□□ -1.31
A1CF-205ENST00000374001 TDRD9Q8NDG6 1382 aaKnown RBP6.86□□□□□ -1.31
A1CF-205ENST00000374001 CASC1Q6TDU7 716 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms