RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 ARAP1Q96P48 1450 aa20.52■□□□□ 0.88
A1CF-204ENST00000373997 VPS8Q8N3P4 1428 aa20.52■□□□□ 0.88
A1CF-204ENST00000373997 ARHGAP35Q9NRY4 1499 aa20.5■□□□□ 0.87
A1CF-204ENST00000373997 FHAD1B1AJZ9 1412 aa20.47■□□□□ 0.87
A1CF-204ENST00000373997 SNAPC4Q5SXM2 1469 aa20.45■□□□□ 0.86
A1CF-204ENST00000373997 TTBK1Q5TCY1 1321 aaPredicted RBP20.42■□□□□ 0.86
A1CF-204ENST00000373997 EFCAB5A4FU69 1503 aa20.36■□□□□ 0.85
A1CF-204ENST00000373997 MAGI1Q96QZ7 1491 aaPredicted RBP20.36■□□□□ 0.85
A1CF-204ENST00000373997 IQGAP2Q13576 1575 aa20.32■□□□□ 0.84
A1CF-204ENST00000373997 P3H3Q8IVL6 736 aa20.32■□□□□ 0.84
A1CF-204ENST00000373997 GRIN2AQ12879 1464 aa20.32■□□□□ 0.84
A1CF-204ENST00000373997 SAMD9Q5K651 1589 aa20.31■□□□□ 0.84
A1CF-204ENST00000373997 APLP2Q06481 763 aa20.31■□□□□ 0.84
A1CF-204ENST00000373997 FHOD3Q2V2M9 1422 aa20.31■□□□□ 0.84
A1CF-204ENST00000373997 SYNJ2O15056 1496 aa20.28■□□□□ 0.84
A1CF-204ENST00000373997 PCF11O94913 1555 aaKnown RBP20.27■□□□□ 0.84
A1CF-204ENST00000373997 CEP170Q5SW79 1584 aa20.23■□□□□ 0.83
A1CF-204ENST00000373997 FBLN2P98095 1184 aa20.23■□□□□ 0.83
A1CF-204ENST00000373997 CHMP7Q8WUX9 453 aaPredicted RBP20.23■□□□□ 0.83
A1CF-204ENST00000373997 CHD1O14646 1710 aa20.21■□□□□ 0.83
A1CF-204ENST00000373997 CFAP43Q8NDM7 1665 aa20.19■□□□□ 0.82
A1CF-204ENST00000373997 KIAA0586Q9BVV6 1533 aa20.19■□□□□ 0.82
A1CF-204ENST00000373997 TIAM1Q13009 1591 aa20.18■□□□□ 0.82
A1CF-204ENST00000373997 UGGT2Q9NYU1 1516 aa20.17■□□□□ 0.82
A1CF-204ENST00000373997 FYCO1Q9BQS8 1478 aa20.15■□□□□ 0.82
A1CF-204ENST00000373997 FMN1Q68DA7 1419 aa20.15■□□□□ 0.82
A1CF-204ENST00000373997 LRRIQ1Q96JM4 1722 aa20.14■□□□□ 0.81
A1CF-204ENST00000373997 KIAA0556O60303 1618 aa20.13■□□□□ 0.81
A1CF-204ENST00000373997 KANK4Q5T7N3 995 aaPredicted RBP20.12■□□□□ 0.81
A1CF-204ENST00000373997 ATP1B4Q9UN42 357 aaPredicted RBP20.12■□□□□ 0.81
A1CF-204ENST00000373997 NUP160Q12769 1436 aa20.12■□□□□ 0.81
A1CF-204ENST00000373997 CASKIN1Q8WXD9 1431 aa20.12■□□□□ 0.81
A1CF-204ENST00000373997 MAP3K1Q13233 1512 aa20.1■□□□□ 0.81
A1CF-204ENST00000373997 DISP1Q96F81 1524 aa20.08■□□□□ 0.8
A1CF-204ENST00000373997 LRRC9Q6ZRR7 1453 aa20.03■□□□□ 0.8
A1CF-204ENST00000373997 HECW1Q76N89 1606 aa20.02■□□□□ 0.8
A1CF-204ENST00000373997 CCER1Q8TC90 406 aaPredicted RBP20■□□□□ 0.79
A1CF-204ENST00000373997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.96■□□□□ 0.79
A1CF-204ENST00000373997 JPH4Q96JJ6 628 aa19.96■□□□□ 0.79
A1CF-204ENST00000373997 RAPGEF6Q8TEU7 1601 aa19.95■□□□□ 0.78
A1CF-204ENST00000373997 CARMIL2Q6F5E8 1435 aa19.94■□□□□ 0.78
A1CF-204ENST00000373997 CCDC18Q5T9S5 1454 aa19.93■□□□□ 0.78
A1CF-204ENST00000373997 CDK13Q14004 1512 aaKnown RBP19.91■□□□□ 0.78
A1CF-204ENST00000373997 SHROOM2Q13796 1616 aa19.9■□□□□ 0.78
A1CF-204ENST00000373997 EPRSP07814 1512 aaKnown RBP19.9■□□□□ 0.78
A1CF-204ENST00000373997 RRBP1Q9P2E9 1410 aaKnown RBP19.89■□□□□ 0.77
A1CF-204ENST00000373997 MTUS2Q5JR59 1369 aa19.88■□□□□ 0.77
A1CF-204ENST00000373997 HNRNPUL2Q1KMD3 747 aaKnown RBP19.88■□□□□ 0.77
A1CF-204ENST00000373997 SUPT6HQ7KZ85 1726 aaKnown RBP19.88■□□□□ 0.77
A1CF-204ENST00000373997 EHBP1L1Q8N3D4 1523 aa19.88■□□□□ 0.77
A1CF-204ENST00000373997 PRG4Q92954 1404 aaPredicted RBP19.87■□□□□ 0.77
A1CF-204ENST00000373997 ARID3CA6NKF2 412 aa19.87■□□□□ 0.77
A1CF-204ENST00000373997 MAGI3Q5TCQ9 1506 aa19.86■□□□□ 0.77
A1CF-204ENST00000373997 PHLDB1Q86UU1 1377 aa19.86■□□□□ 0.77
A1CF-204ENST00000373997 CLASP1Q7Z460 1538 aa19.84■□□□□ 0.77
A1CF-204ENST00000373997 NUP153P49790 1475 aaKnown RBP19.84■□□□□ 0.77
A1CF-204ENST00000373997 PLB1Q6P1J6 1458 aa19.84■□□□□ 0.77
A1CF-204ENST00000373997 CCNB3Q8WWL7 1395 aa19.83■□□□□ 0.77
A1CF-204ENST00000373997 SCAF1Q9H7N4 1312 aaKnown RBP19.81■□□□□ 0.76
A1CF-204ENST00000373997 PELP1Q8IZL8 1130 aaKnown RBP19.81■□□□□ 0.76
A1CF-204ENST00000373997 ERCC6L2Q5T890 1561 aa19.8■□□□□ 0.76
A1CF-204ENST00000373997 ABCA8O94911 1581 aa19.79■□□□□ 0.76
A1CF-204ENST00000373997 NCOA2Q15596 1464 aa19.79■□□□□ 0.76
A1CF-204ENST00000373997 PTPRGP23470 1445 aa19.73■□□□□ 0.75
A1CF-204ENST00000373997 ARHGEF11O15085 1522 aa19.72■□□□□ 0.75
A1CF-204ENST00000373997 ITGAEP38570 1179 aa19.72■□□□□ 0.75
A1CF-204ENST00000373997 FGD6Q6ZV73 1430 aa19.71■□□□□ 0.75
A1CF-204ENST00000373997 FAM50AQ14320 339 aaKnown RBP19.71■□□□□ 0.75
A1CF-204ENST00000373997 DIEXFQ68CQ4 756 aaKnown RBP19.7■□□□□ 0.74
A1CF-204ENST00000373997 MYOM3Q5VTT5 1437 aa19.7■□□□□ 0.74
A1CF-204ENST00000373997 PTPN23Q9H3S7 1636 aa19.67■□□□□ 0.74
A1CF-204ENST00000373997 ACIN1Q9UKV3 1341 aaKnown RBP19.66■□□□□ 0.74
A1CF-204ENST00000373997 ADCY10Q96PN6 1610 aa19.65■□□□□ 0.74
A1CF-204ENST00000373997 KIF14Q15058 1648 aa19.65■□□□□ 0.74
A1CF-204ENST00000373997 CDK11AQ9UQ88 783 aaPredicted RBP19.64■□□□□ 0.74
A1CF-204ENST00000373997 ATP10BO94823 1461 aa19.64■□□□□ 0.73
A1CF-204ENST00000373997 TROQ12816 1431 aaPredicted RBP19.63■□□□□ 0.73
A1CF-204ENST00000373997 UACAQ9BZF9 1416 aa19.63■□□□□ 0.73
A1CF-204ENST00000373997 ABCC2Q92887 1545 aa19.6■□□□□ 0.73
A1CF-204ENST00000373997 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.6■□□□□ 0.73
A1CF-204ENST00000373997 ITSN2Q9NZM3 1697 aa19.6■□□□□ 0.73
A1CF-204ENST00000373997 CENPBP07199 599 aaPredicted RBP19.59■□□□□ 0.73
A1CF-204ENST00000373997 ZNF316A6NFI3 1004 aaPredicted RBP19.56■□□□□ 0.72
A1CF-204ENST00000373997 TCOF1Q13428 1488 aaKnown RBP19.55■□□□□ 0.72
A1CF-204ENST00000373997 CDC42BPAQ5VT25 1732 aa19.55■□□□□ 0.72
A1CF-204ENST00000373997 OSCARQ8IYS5 282 aa19.55■□□□□ 0.72
A1CF-204ENST00000373997 NEUROD1Q13562 356 aa19.54■□□□□ 0.72
A1CF-204ENST00000373997 ZCCHC11Q5TAX3 1644 aaKnown RBP19.54■□□□□ 0.72
A1CF-204ENST00000373997 MIA2Q96PC5 1412 aa19.53■□□□□ 0.72
A1CF-204ENST00000373997 PLEKHD1A6NEE1 506 aa19.53■□□□□ 0.72
A1CF-204ENST00000373997 RAB3GAP2Q9H2M9 1393 aa19.49■□□□□ 0.71
A1CF-204ENST00000373997 PTPRKQ15262 1439 aa19.49■□□□□ 0.71
A1CF-204ENST00000373997 SETD5Q9C0A6 1442 aa19.49■□□□□ 0.71
A1CF-204ENST00000373997 UHRF1BP1LA0JNW5 1464 aa19.48■□□□□ 0.71
A1CF-204ENST00000373997 GPATCH8Q9UKJ3 1502 aaKnown RBP19.47■□□□□ 0.71
A1CF-204ENST00000373997 ABCC10Q5T3U5 1492 aa19.46■□□□□ 0.71
A1CF-204ENST00000373997 DNMT1P26358 1616 aaKnown RBP19.45■□□□□ 0.7
A1CF-204ENST00000373997 DHX57Q6P158 1386 aaKnown RBP19.44■□□□□ 0.7
A1CF-204ENST00000373997 CAMSAP2Q08AD1 1489 aa19.44■□□□□ 0.7
A1CF-204ENST00000373997 KDM5BQ9UGL1 1544 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms