RNA–Protein interactions for RNA: ENST00000373899.3

TFAM-202, Transcript of transcription factor A, mitochondrial, humanhuman

TSL 2

Gene TFAM, Length 1,121 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-202ENST00000373899 NUP160Q12769 1436 aa23.78■■□□□ 1.4
TFAM-202ENST00000373899 BIVM-ERCC5R4GMW8 1640 aa23.77■■□□□ 1.4
TFAM-202ENST00000373899 SHROOM2Q13796 1616 aa23.77■■□□□ 1.4
TFAM-202ENST00000373899 TOP2BQ02880 1626 aa23.74■■□□□ 1.39
TFAM-202ENST00000373899 WRNQ14191 1432 aaPredicted RBP eCLIP23.72■■□□□ 1.39
TFAM-202ENST00000373899 FHAD1B1AJZ9 1412 aa23.66■■□□□ 1.38
TFAM-202ENST00000373899 ERICH3Q5RHP9 1530 aa23.64■■□□□ 1.38
TFAM-202ENST00000373899 KIF13AQ9H1H9 1805 aa23.6■■□□□ 1.37
TFAM-202ENST00000373899 RUSC2Q8N2Y8 1516 aa23.51■■□□□ 1.35
TFAM-202ENST00000373899 PRG4Q92954 1404 aaPredicted RBP23.5■■□□□ 1.35
TFAM-202ENST00000373899 MAPK8IP2Q13387 824 aaPredicted RBP23.41■■□□□ 1.34
TFAM-202ENST00000373899 JPH4Q96JJ6 628 aa23.41■■□□□ 1.34
TFAM-202ENST00000373899 MAPKBP1O60336 1514 aa23.38■■□□□ 1.33
TFAM-202ENST00000373899 ADCY10Q96PN6 1610 aa23.37■■□□□ 1.33
TFAM-202ENST00000373899 ABCC10Q5T3U5 1492 aa23.36■■□□□ 1.33
TFAM-202ENST00000373899 DIP2BQ9P265 1576 aa23.35■■□□□ 1.33
TFAM-202ENST00000373899 KIAA0586Q9BVV6 1533 aa23.28■■□□□ 1.32
TFAM-202ENST00000373899 CUL7Q14999 1698 aa23.25■■□□□ 1.31
TFAM-202ENST00000373899 IGF1RP08069 1367 aa23.25■■□□□ 1.31
TFAM-202ENST00000373899 FAM69CQ0P6D2 419 aa23.24■■□□□ 1.31
TFAM-202ENST00000373899 DMRT2Q9Y5R5 561 aa23.23■■□□□ 1.31
TFAM-202ENST00000373899 SCAF1Q9H7N4 1312 aaKnown RBP23.2■■□□□ 1.3
TFAM-202ENST00000373899 KIF27Q86VH2 1401 aa23.16■■□□□ 1.3
TFAM-202ENST00000373899 KDM6BO15054 1643 aa23.16■■□□□ 1.3
TFAM-202ENST00000373899 NPM1P06748 294 aaKnown RBP eCLIP23.14■■□□□ 1.29
TFAM-202ENST00000373899 TSPOAP1O95153 1857 aa23.13■■□□□ 1.29
TFAM-202ENST00000373899 PPRC1Q5VV67 1664 aaKnown RBP23.07■■□□□ 1.28
TFAM-202ENST00000373899 KDM4FA0A1W2PPD8 638 aa23.06■■□□□ 1.28
TFAM-202ENST00000373899 ABCC2Q92887 1545 aa23.05■■□□□ 1.28
TFAM-202ENST00000373899 PTPRGP23470 1445 aa23.05■■□□□ 1.28
TFAM-202ENST00000373899 CARMIL1Q5VZK9 1371 aa23.03■■□□□ 1.28
TFAM-202ENST00000373899 IQGAP2Q13576 1575 aa23.02■■□□□ 1.28
TFAM-202ENST00000373899 GLI2P10070 1586 aa23.01■■□□□ 1.27
TFAM-202ENST00000373899 TNIKQ9UKE5 1360 aa23.01■■□□□ 1.27
TFAM-202ENST00000373899 UHRF1BP1LA0JNW5 1464 aa22.99■■□□□ 1.27
TFAM-202ENST00000373899 DISP1Q96F81 1524 aa22.98■■□□□ 1.27
TFAM-202ENST00000373899 ASXL2Q76L83 1435 aa22.98■■□□□ 1.27
TFAM-202ENST00000373899 CARMIL2Q6F5E8 1435 aa22.96■■□□□ 1.27
TFAM-202ENST00000373899 PLB1Q6P1J6 1458 aa22.94■■□□□ 1.26
TFAM-202ENST00000373899 UACAQ9BZF9 1416 aa22.91■■□□□ 1.26
TFAM-202ENST00000373899 MAP3K4Q9Y6R4 1608 aa22.9■■□□□ 1.26
TFAM-202ENST00000373899 KDM5BQ9UGL1 1544 aa22.9■■□□□ 1.26
TFAM-202ENST00000373899 UGGT2Q9NYU1 1516 aa22.89■■□□□ 1.26
TFAM-202ENST00000373899 COL17A1Q9UMD9 1497 aaPredicted RBP22.89■■□□□ 1.25
TFAM-202ENST00000373899 TTBK1Q5TCY1 1321 aaPredicted RBP22.87■■□□□ 1.25
TFAM-202ENST00000373899 EPRSP07814 1512 aaKnown RBP22.87■■□□□ 1.25
TFAM-202ENST00000373899 KIAA0556O60303 1618 aa22.86■■□□□ 1.25
TFAM-202ENST00000373899 ZCCHC11Q5TAX3 1644 aaKnown RBP22.86■■□□□ 1.25
TFAM-202ENST00000373899 PPP4R3CPQ6ZMV5 832 aa22.83■■□□□ 1.25
TFAM-202ENST00000373899 RAPGEF2Q9Y4G8 1499 aa22.82■■□□□ 1.24
TFAM-202ENST00000373899 ADGRL1O94910 1474 aa22.81■■□□□ 1.24
TFAM-202ENST00000373899 CTTNBP2Q8WZ74 1663 aa22.73■■□□□ 1.23
TFAM-202ENST00000373899 TEX14Q8IWB6 1497 aa22.73■■□□□ 1.23
TFAM-202ENST00000373899 WDR7Q9Y4E6 1490 aa22.71■■□□□ 1.23
TFAM-202ENST00000373899 ABCA8O94911 1581 aa22.67■■□□□ 1.22
TFAM-202ENST00000373899 CFAP43Q8NDM7 1665 aa22.65■■□□□ 1.22
TFAM-202ENST00000373899 HECW2Q9P2P5 1572 aa22.63■■□□□ 1.21
TFAM-202ENST00000373899 MAGI3Q5TCQ9 1506 aa22.62■■□□□ 1.21
TFAM-202ENST00000373899 ILDR1Q86SU0 546 aaPredicted RBP22.61■■□□□ 1.21
TFAM-202ENST00000373899 GOLGA3Q08378 1498 aa22.58■■□□□ 1.2
TFAM-202ENST00000373899 PRXQ9BXM0 1461 aa22.57■■□□□ 1.2
TFAM-202ENST00000373899 CD109Q6YHK3 1445 aa22.55■■□□□ 1.2
TFAM-202ENST00000373899 KIF21BO75037 1637 aa22.5■■□□□ 1.19
TFAM-202ENST00000373899 CSRNP3Q8WYN3 585 aa22.49■■□□□ 1.19
TFAM-202ENST00000373899 ARAP3Q8WWN8 1544 aa22.47■■□□□ 1.19
TFAM-202ENST00000373899 KCNH8Q96L42 1107 aa22.45■■□□□ 1.18
TFAM-202ENST00000373899 ABCA9Q8IUA7 1624 aa22.43■■□□□ 1.18
TFAM-202ENST00000373899 ATP10BO94823 1461 aa22.43■■□□□ 1.18
TFAM-202ENST00000373899 SAMD9Q5K651 1589 aa22.42■■□□□ 1.18
TFAM-202ENST00000373899 HOXD11P31277 338 aaPredicted RBP22.38■■□□□ 1.17
TFAM-202ENST00000373899 CNKSR2Q8WXI2 1034 aa22.38■■□□□ 1.17
TFAM-202ENST00000373899 EEA1Q15075 1411 aa22.38■■□□□ 1.17
TFAM-202ENST00000373899 ADAMTSL3P82987 1691 aa22.37■■□□□ 1.17
TFAM-202ENST00000373899 FAM9AQ8IZU1 332 aaPredicted RBP22.37■■□□□ 1.17
TFAM-202ENST00000373899 FRMPD1Q5SYB0 1578 aa22.34■■□□□ 1.17
TFAM-202ENST00000373899 RAPGEF6Q8TEU7 1601 aa22.34■■□□□ 1.17
TFAM-202ENST00000373899 ARID3CA6NKF2 412 aa22.31■■□□□ 1.16
TFAM-202ENST00000373899 PHLDB1Q86UU1 1377 aa22.29■■□□□ 1.16
TFAM-202ENST00000373899 P3H3Q8IVL6 736 aa22.29■■□□□ 1.16
TFAM-202ENST00000373899 NEO1Q92859 1461 aa22.28■■□□□ 1.16
TFAM-202ENST00000373899 PTPRMP28827 1452 aa22.28■■□□□ 1.16
TFAM-202ENST00000373899 NUP153P49790 1475 aaKnown RBP22.27■■□□□ 1.16
TFAM-202ENST00000373899 BCORL1Q5H9F3 1711 aa22.26■■□□□ 1.15
TFAM-202ENST00000373899 RAPGEF3O95398 923 aa22.23■■□□□ 1.15
TFAM-202ENST00000373899 MADDQ8WXG6 1647 aa22.22■■□□□ 1.15
TFAM-202ENST00000373899 DCAF8L1A6NGE4 600 aa22.22■■□□□ 1.15
TFAM-202ENST00000373899 RICTORQ6R327 1708 aa22.2■■□□□ 1.14
TFAM-202ENST00000373899 RNF216Q9NWF9 866 aaPredicted RBP22.19■■□□□ 1.14
TFAM-202ENST00000373899 ARHGEF40Q8TER5 1519 aa22.19■■□□□ 1.14
TFAM-202ENST00000373899 FHOD3Q2V2M9 1422 aa22.15■■□□□ 1.14
TFAM-202ENST00000373899 PCF11O94913 1555 aaKnown RBP22.15■■□□□ 1.14
TFAM-202ENST00000373899 SIGLEC1Q9BZZ2 1709 aa22.14■■□□□ 1.14
TFAM-202ENST00000373899 LMTK3Q96Q04 1460 aa22.14■■□□□ 1.13
TFAM-202ENST00000373899 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.12■■□□□ 1.135e-8■■■■■ 28.6
TFAM-202ENST00000373899 TTC37Q6PGP7 1564 aa22.12■■□□□ 1.13
TFAM-202ENST00000373899 ZMYM4Q5VZL5 1548 aa22.11■■□□□ 1.13
TFAM-202ENST00000373899 RIMS1Q86UR5 1692 aaKnown RBP22.11■■□□□ 1.13
TFAM-202ENST00000373899 FBXO41Q8TF61 875 aa22.09■■□□□ 1.13
TFAM-202ENST00000373899 DENND4BO75064 1496 aaPredicted RBP22.09■■□□□ 1.13
TFAM-202ENST00000373899 CFAP74Q9C0B2 1584 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms