RNA–Protein interactions for RNA: ENST00000373895.7

TFAM-201, Transcript of transcription factor A, mitochondrial, humanhuman

TSL 2 BASIC

Gene TFAM, Length 973 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-201ENST00000373895 GRIN2AQ12879 1464 aa21.71■■□□□ 1.07
TFAM-201ENST00000373895 CEP170Q5SW79 1584 aa21.65■■□□□ 1.06
TFAM-201ENST00000373895 FHAD1B1AJZ9 1412 aa21.64■■□□□ 1.06
TFAM-201ENST00000373895 ERICH3Q5RHP9 1530 aa21.63■■□□□ 1.05
TFAM-201ENST00000373895 NUP160Q12769 1436 aa21.62■■□□□ 1.05
TFAM-201ENST00000373895 ERCC6L2Q5T890 1561 aa21.61■■□□□ 1.05
TFAM-201ENST00000373895 SHROOM2Q13796 1616 aa21.52■■□□□ 1.04
TFAM-201ENST00000373895 PRG4Q92954 1404 aaPredicted RBP21.44■■□□□ 1.02
TFAM-201ENST00000373895 JPH4Q96JJ6 628 aa21.43■■□□□ 1.02
TFAM-201ENST00000373895 KIF27Q86VH2 1401 aa21.41■■□□□ 1.02
TFAM-201ENST00000373895 IGF1RP08069 1367 aa21.4■■□□□ 1.02
TFAM-201ENST00000373895 RUSC2Q8N2Y8 1516 aa21.39■■□□□ 1.02
TFAM-201ENST00000373895 SCAF1Q9H7N4 1312 aaKnown RBP21.37■■□□□ 1.01
TFAM-201ENST00000373895 CUL7Q14999 1698 aa21.34■■□□□ 1.01
TFAM-201ENST00000373895 KIAA0586Q9BVV6 1533 aa21.29■■□□□ 1
TFAM-201ENST00000373895 CARMIL1Q5VZK9 1371 aa21.27■■□□□ 1
TFAM-201ENST00000373895 MAPK8IP2Q13387 824 aaPredicted RBP21.27■■□□□ 1
TFAM-201ENST00000373895 DMRT2Q9Y5R5 561 aa21.22■□□□□ 0.99
TFAM-201ENST00000373895 KIF13AQ9H1H9 1805 aa21.21■□□□□ 0.99
TFAM-201ENST00000373895 ADCY10Q96PN6 1610 aa21.18■□□□□ 0.98
TFAM-201ENST00000373895 NPM1P06748 294 aaKnown RBP eCLIP21.18■□□□□ 0.98
TFAM-201ENST00000373895 TTBK1Q5TCY1 1321 aaPredicted RBP21.14■□□□□ 0.97
TFAM-201ENST00000373895 FAM69CQ0P6D2 419 aa21.11■□□□□ 0.97
TFAM-201ENST00000373895 IQGAP2Q13576 1575 aa21.1■□□□□ 0.97
TFAM-201ENST00000373895 PTPRGP23470 1445 aa21.1■□□□□ 0.97
TFAM-201ENST00000373895 MAPKBP1O60336 1514 aa21.09■□□□□ 0.97
TFAM-201ENST00000373895 ABCC10Q5T3U5 1492 aa21.09■□□□□ 0.97
TFAM-201ENST00000373895 CARMIL2Q6F5E8 1435 aa21.08■□□□□ 0.97
TFAM-201ENST00000373895 RAPGEF2Q9Y4G8 1499 aa21.07■□□□□ 0.96
TFAM-201ENST00000373895 TNIKQ9UKE5 1360 aa21.06■□□□□ 0.96
TFAM-201ENST00000373895 DIP2BQ9P265 1576 aa21.05■□□□□ 0.96
TFAM-201ENST00000373895 DISP1Q96F81 1524 aa21.01■□□□□ 0.95
TFAM-201ENST00000373895 TSPOAP1O95153 1857 aa20.97■□□□□ 0.95
TFAM-201ENST00000373895 UGGT2Q9NYU1 1516 aa20.97■□□□□ 0.95
TFAM-201ENST00000373895 ABCC2Q92887 1545 aa20.96■□□□□ 0.95
TFAM-201ENST00000373895 UACAQ9BZF9 1416 aa20.93■□□□□ 0.94
TFAM-201ENST00000373895 UHRF1BP1LA0JNW5 1464 aa20.92■□□□□ 0.94
TFAM-201ENST00000373895 KIAA0556O60303 1618 aa20.92■□□□□ 0.94
TFAM-201ENST00000373895 CTTNBP2Q8WZ74 1663 aa20.92■□□□□ 0.94
TFAM-201ENST00000373895 ASXL2Q76L83 1435 aa20.9■□□□□ 0.94
TFAM-201ENST00000373895 PLB1Q6P1J6 1458 aa20.87■□□□□ 0.93
TFAM-201ENST00000373895 PRXQ9BXM0 1461 aa20.87■□□□□ 0.93
TFAM-201ENST00000373895 KDM6BO15054 1643 aa20.86■□□□□ 0.93
TFAM-201ENST00000373895 KDM5BQ9UGL1 1544 aa20.83■□□□□ 0.93
TFAM-201ENST00000373895 ZCCHC11Q5TAX3 1644 aaKnown RBP20.82■□□□□ 0.92
TFAM-201ENST00000373895 GLI2P10070 1586 aa20.81■□□□□ 0.92
TFAM-201ENST00000373895 PPP4R3CPQ6ZMV5 832 aa20.8■□□□□ 0.92
TFAM-201ENST00000373895 GOLGA3Q08378 1498 aa20.8■□□□□ 0.92
TFAM-201ENST00000373895 PPRC1Q5VV67 1664 aaKnown RBP20.8■□□□□ 0.92
TFAM-201ENST00000373895 EPRSP07814 1512 aaKnown RBP20.77■□□□□ 0.92
TFAM-201ENST00000373895 CSRNP3Q8WYN3 585 aa20.75■□□□□ 0.91
TFAM-201ENST00000373895 MAP3K4Q9Y6R4 1608 aa20.72■□□□□ 0.91
TFAM-201ENST00000373895 P3H3Q8IVL6 736 aa20.72■□□□□ 0.91
TFAM-201ENST00000373895 ABCA8O94911 1581 aa20.72■□□□□ 0.91
TFAM-201ENST00000373895 WDR7Q9Y4E6 1490 aa20.69■□□□□ 0.9
TFAM-201ENST00000373895 KCNH8Q96L42 1107 aa20.66■□□□□ 0.9
TFAM-201ENST00000373895 COL17A1Q9UMD9 1497 aaPredicted RBP20.65■□□□□ 0.9
TFAM-201ENST00000373895 KDM4FA0A1W2PPD8 638 aa20.65■□□□□ 0.9
TFAM-201ENST00000373895 FAM9AQ8IZU1 332 aaPredicted RBP20.65■□□□□ 0.9
TFAM-201ENST00000373895 ARID3CA6NKF2 412 aa20.64■□□□□ 0.89
TFAM-201ENST00000373895 TEX14Q8IWB6 1497 aa20.63■□□□□ 0.89
TFAM-201ENST00000373895 EEA1Q15075 1411 aa20.61■□□□□ 0.89
TFAM-201ENST00000373895 SAMD9Q5K651 1589 aa20.6■□□□□ 0.89
TFAM-201ENST00000373895 RANGAP1P46060 587 aaPredicted RBP20.6■□□□□ 0.89
TFAM-201ENST00000373895 CD109Q6YHK3 1445 aa20.58■□□□□ 0.88
TFAM-201ENST00000373895 CFAP43Q8NDM7 1665 aa20.58■□□□□ 0.88
TFAM-201ENST00000373895 ATP10BO94823 1461 aa20.56■□□□□ 0.88
TFAM-201ENST00000373895 MAGI3Q5TCQ9 1506 aa20.53■□□□□ 0.88
TFAM-201ENST00000373895 RAPGEF6Q8TEU7 1601 aa20.53■□□□□ 0.88
TFAM-201ENST00000373895 DCAF8L1A6NGE4 600 aa20.51■□□□□ 0.87
TFAM-201ENST00000373895 FHOD3Q2V2M9 1422 aa20.5■□□□□ 0.87
TFAM-201ENST00000373895 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.49■□□□□ 0.87
TFAM-201ENST00000373895 HNRNPUL2Q1KMD3 747 aaKnown RBP20.49■□□□□ 0.87
TFAM-201ENST00000373895 KIF21BO75037 1637 aa20.48■□□□□ 0.87
TFAM-201ENST00000373895 ADGRL1O94910 1474 aa20.48■□□□□ 0.87
TFAM-201ENST00000373895 EHMT2Q96KQ7 1210 aa20.47■□□□□ 0.87
TFAM-201ENST00000373895 CNKSR2Q8WXI2 1034 aa20.46■□□□□ 0.87
TFAM-201ENST00000373895 NUP153P49790 1475 aaKnown RBP20.44■□□□□ 0.86
TFAM-201ENST00000373895 ABCA9Q8IUA7 1624 aa20.42■□□□□ 0.86
TFAM-201ENST00000373895 EFCAB5A4FU69 1503 aa20.38■□□□□ 0.85
TFAM-201ENST00000373895 UBTFP17480 764 aaKnown RBP20.38■□□□□ 0.85
TFAM-201ENST00000373895 HOXD11P31277 338 aaPredicted RBP20.38■□□□□ 0.85
TFAM-201ENST00000373895 ARAP3Q8WWN8 1544 aa20.37■□□□□ 0.85
TFAM-201ENST00000373895 PLEKHD1A6NEE1 506 aa20.34■□□□□ 0.85
TFAM-201ENST00000373895 PHLDB1Q86UU1 1377 aa20.32■□□□□ 0.84
TFAM-201ENST00000373895 RAPGEF3O95398 923 aa20.31■□□□□ 0.84
TFAM-201ENST00000373895 NEO1Q92859 1461 aa20.3■□□□□ 0.84
TFAM-201ENST00000373895 CDK13Q14004 1512 aaKnown RBP20.27■□□□□ 0.84
TFAM-201ENST00000373895 RNF216Q9NWF9 866 aaPredicted RBP20.26■□□□□ 0.83
TFAM-201ENST00000373895 ATP1B4Q9UN42 357 aaPredicted RBP20.26■□□□□ 0.83
TFAM-201ENST00000373895 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.26■□□□□ 0.835e-8■■■■■ 28.6
TFAM-201ENST00000373895 ARHGAP35Q9NRY4 1499 aa20.25■□□□□ 0.83
TFAM-201ENST00000373895 FRMPD1Q5SYB0 1578 aa20.24■□□□□ 0.83
TFAM-201ENST00000373895 TTC37Q6PGP7 1564 aa20.23■□□□□ 0.83
TFAM-201ENST00000373895 FMN1Q68DA7 1419 aa20.21■□□□□ 0.83
TFAM-201ENST00000373895 CACNB1Q02641 598 aaPredicted RBP20.21■□□□□ 0.83
TFAM-201ENST00000373895 AKNAQ7Z591 1439 aa20.2■□□□□ 0.82
TFAM-201ENST00000373895 HECW1Q76N89 1606 aa20.2■□□□□ 0.82
TFAM-201ENST00000373895 FANCAO15360 1455 aa20.19■□□□□ 0.82
TFAM-201ENST00000373895 DENND4BO75064 1496 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms