RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 CACNB1Q02641 598 aaPredicted RBP13.71□□□□□ -0.21
SP140-202ENST00000373645 DMRT2Q9Y5R5 561 aa13.7□□□□□ -0.22
SP140-202ENST00000373645 SHROOM2Q13796 1616 aa13.7□□□□□ -0.22
SP140-202ENST00000373645 WRNQ14191 1432 aaPredicted RBP eCLIP13.69□□□□□ -0.22
SP140-202ENST00000373645 FHAD1B1AJZ9 1412 aa13.66□□□□□ -0.22
SP140-202ENST00000373645 TOP2BQ02880 1626 aa13.66□□□□□ -0.22
SP140-202ENST00000373645 BIVM-ERCC5R4GMW8 1640 aa13.66□□□□□ -0.22
SP140-202ENST00000373645 SUPT5HO00267 1087 aaKnown RBP13.66□□□□□ -0.22
SP140-202ENST00000373645 KIF13AQ9H1H9 1805 aa13.65□□□□□ -0.22
SP140-202ENST00000373645 MAPK8IP2Q13387 824 aaPredicted RBP13.64□□□□□ -0.23
SP140-202ENST00000373645 PRG4Q92954 1404 aaPredicted RBP13.62□□□□□ -0.23
SP140-202ENST00000373645 ERICH3Q5RHP9 1530 aa13.61□□□□□ -0.23
SP140-202ENST00000373645 RUSC2Q8N2Y8 1516 aa13.58□□□□□ -0.24
SP140-202ENST00000373645 JPH4Q96JJ6 628 aa13.55□□□□□ -0.24
SP140-202ENST00000373645 ADCY10Q96PN6 1610 aa13.53□□□□□ -0.24
SP140-202ENST00000373645 ABCC10Q5T3U5 1492 aa13.53□□□□□ -0.24
SP140-202ENST00000373645 FAM69CQ0P6D2 419 aa13.52□□□□□ -0.25
SP140-202ENST00000373645 DIP2BQ9P265 1576 aa13.52□□□□□ -0.25
SP140-202ENST00000373645 SCAF1Q9H7N4 1312 aaKnown RBP13.51□□□□□ -0.25
SP140-202ENST00000373645 MAPKBP1O60336 1514 aa13.49□□□□□ -0.25
SP140-202ENST00000373645 TSPOAP1O95153 1857 aa13.44□□□□□ -0.26
SP140-202ENST00000373645 KDM4FA0A1W2PPD8 638 aa13.44□□□□□ -0.26
SP140-202ENST00000373645 KDM6BO15054 1643 aa13.43□□□□□ -0.26
SP140-202ENST00000373645 KIAA0586Q9BVV6 1533 aa13.43□□□□□ -0.26
SP140-202ENST00000373645 NPM1P06748 294 aaKnown RBP eCLIP13.41□□□□□ -0.26
SP140-202ENST00000373645 IGF1RP08069 1367 aa13.41□□□□□ -0.26
SP140-202ENST00000373645 TTBK1Q5TCY1 1321 aaPredicted RBP13.39□□□□□ -0.27
SP140-202ENST00000373645 CUL7Q14999 1698 aa13.37□□□□□ -0.27
SP140-202ENST00000373645 PPRC1Q5VV67 1664 aaKnown RBP13.35□□□□□ -0.27
SP140-202ENST00000373645 KIF27Q86VH2 1401 aa13.35□□□□□ -0.27
SP140-202ENST00000373645 PTPRGP23470 1445 aa13.34□□□□□ -0.27
SP140-202ENST00000373645 ABCC2Q92887 1545 aa13.33□□□□□ -0.28
SP140-202ENST00000373645 ASXL2Q76L83 1435 aa13.32□□□□□ -0.28
SP140-202ENST00000373645 CARMIL1Q5VZK9 1371 aa13.31□□□□□ -0.28
SP140-202ENST00000373645 COL17A1Q9UMD9 1497 aaPredicted RBP13.29□□□□□ -0.28
SP140-202ENST00000373645 TNIKQ9UKE5 1360 aa13.29□□□□□ -0.28
SP140-202ENST00000373645 IQGAP2Q13576 1575 aa13.28□□□□□ -0.28
SP140-202ENST00000373645 DCAF8L1A6NGE4 600 aa13.28□□□□□ -0.28
SP140-202ENST00000373645 ADGRL1O94910 1474 aa13.28□□□□□ -0.28
SP140-202ENST00000373645 DISP1Q96F81 1524 aa13.27□□□□□ -0.29
SP140-202ENST00000373645 GLI2P10070 1586 aa13.27□□□□□ -0.29
SP140-202ENST00000373645 ILDR1Q86SU0 546 aaPredicted RBP13.26□□□□□ -0.29
SP140-202ENST00000373645 UHRF1BP1LA0JNW5 1464 aa13.25□□□□□ -0.29
SP140-202ENST00000373645 PLB1Q6P1J6 1458 aa13.25□□□□□ -0.29
SP140-202ENST00000373645 CARMIL2Q6F5E8 1435 aa13.25□□□□□ -0.29
SP140-202ENST00000373645 UACAQ9BZF9 1416 aa13.24□□□□□ -0.29
SP140-202ENST00000373645 EPRSP07814 1512 aaKnown RBP13.23□□□□□ -0.29
SP140-202ENST00000373645 MAP3K4Q9Y6R4 1608 aa13.23□□□□□ -0.29
SP140-202ENST00000373645 KDM5BQ9UGL1 1544 aa13.22□□□□□ -0.29
SP140-202ENST00000373645 ZCCHC11Q5TAX3 1644 aaKnown RBP13.21□□□□□ -0.29
SP140-202ENST00000373645 KIAA0556O60303 1618 aa13.19□□□□□ -0.3
SP140-202ENST00000373645 UGGT2Q9NYU1 1516 aa13.18□□□□□ -0.3
SP140-202ENST00000373645 HECW2Q9P2P5 1572 aa13.18□□□□□ -0.3
SP140-202ENST00000373645 RNF39Q9H2S5 420 aa13.15□□□□□ -0.3
SP140-202ENST00000373645 RAPGEF2Q9Y4G8 1499 aa13.15□□□□□ -0.3
SP140-202ENST00000373645 TEX14Q8IWB6 1497 aa13.14□□□□□ -0.31
SP140-202ENST00000373645 WDR7Q9Y4E6 1490 aa13.14□□□□□ -0.31
SP140-202ENST00000373645 ABCA8O94911 1581 aa13.08□□□□□ -0.32
SP140-202ENST00000373645 CTTNBP2Q8WZ74 1663 aa13.07□□□□□ -0.32
SP140-202ENST00000373645 KIF21BO75037 1637 aa13.06□□□□□ -0.32
SP140-202ENST00000373645 CD109Q6YHK3 1445 aa13.06□□□□□ -0.32
SP140-202ENST00000373645 MAGI3Q5TCQ9 1506 aa13.06□□□□□ -0.32
SP140-202ENST00000373645 KCNH8Q96L42 1107 aa13.05□□□□□ -0.32
SP140-202ENST00000373645 CFAP43Q8NDM7 1665 aa13.05□□□□□ -0.32
SP140-202ENST00000373645 ARID3CA6NKF2 412 aa13.04□□□□□ -0.32
SP140-202ENST00000373645 GOLGA3Q08378 1498 aa13□□□□□ -0.33
SP140-202ENST00000373645 PRXQ9BXM0 1461 aa12.98□□□□□ -0.33
SP140-202ENST00000373645 ARAP3Q8WWN8 1544 aa12.97□□□□□ -0.33
SP140-202ENST00000373645 ATP10BO94823 1461 aa12.97□□□□□ -0.33
SP140-202ENST00000373645 P3H3Q8IVL6 736 aa12.96□□□□□ -0.33
SP140-202ENST00000373645 HOXD11P31277 338 aaPredicted RBP12.95□□□□□ -0.34
SP140-202ENST00000373645 C1QBPQ07021 282 aaKnown RBP12.95□□□□□ -0.34
SP140-202ENST00000373645 FRMPD1Q5SYB0 1578 aa12.94□□□□□ -0.34
SP140-202ENST00000373645 ADAMTSL3P82987 1691 aa12.93□□□□□ -0.34
SP140-202ENST00000373645 PTPRMP28827 1452 aa12.93□□□□□ -0.34
SP140-202ENST00000373645 ABCA9Q8IUA7 1624 aa12.93□□□□□ -0.34
SP140-202ENST00000373645 RAPGEF3O95398 923 aa12.93□□□□□ -0.34
SP140-202ENST00000373645 MADDQ8WXG6 1647 aa12.9□□□□□ -0.34
SP140-202ENST00000373645 SAMD9Q5K651 1589 aa12.89□□□□□ -0.35
SP140-202ENST00000373645 BCORL1Q5H9F3 1711 aa12.88□□□□□ -0.35
SP140-202ENST00000373645 RAPGEF6Q8TEU7 1601 aa12.88□□□□□ -0.35
SP140-202ENST00000373645 NUP153P49790 1475 aaKnown RBP12.87□□□□□ -0.35
SP140-202ENST00000373645 FBXO41Q8TF61 875 aa12.87□□□□□ -0.35
SP140-202ENST00000373645 LMTK3Q96Q04 1460 aa12.86□□□□□ -0.35
SP140-202ENST00000373645 PCF11O94913 1555 aaKnown RBP12.86□□□□□ -0.35
SP140-202ENST00000373645 NEO1Q92859 1461 aa12.85□□□□□ -0.35
SP140-202ENST00000373645 ARHGEF40Q8TER5 1519 aa12.84□□□□□ -0.35
SP140-202ENST00000373645 SIGLEC1Q9BZZ2 1709 aa12.84□□□□□ -0.35
SP140-202ENST00000373645 RIMS1Q86UR5 1692 aaKnown RBP12.83□□□□□ -0.35
SP140-202ENST00000373645 FHOD3Q2V2M9 1422 aa12.83□□□□□ -0.36
SP140-202ENST00000373645 RANGAP1P46060 587 aaPredicted RBP12.83□□□□□ -0.36
SP140-202ENST00000373645 ARID4BQ4LE39 1312 aaPredicted RBP12.83□□□□□ -0.36
SP140-202ENST00000373645 PHLDB1Q86UU1 1377 aa12.82□□□□□ -0.36
SP140-202ENST00000373645 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.82□□□□□ -0.36
SP140-202ENST00000373645 HNRNPUL2Q1KMD3 747 aaKnown RBP12.82□□□□□ -0.36
SP140-202ENST00000373645 RICTORQ6R327 1708 aa12.81□□□□□ -0.36
SP140-202ENST00000373645 HSPA2P54652 639 aa12.8□□□□□ -0.36
SP140-202ENST00000373645 TTC37Q6PGP7 1564 aa12.8□□□□□ -0.36
SP140-202ENST00000373645 YEATS2Q9ULM3 1422 aa12.79□□□□□ -0.36
SP140-202ENST00000373645 DENND4BO75064 1496 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms