RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 VPS8Q8N3P4 1428 aa14.77□□□□□ -0.04
CSMD2-204ENST00000373380 MTUS2Q5JR59 1369 aa14.77□□□□□ -0.05
CSMD2-204ENST00000373380 RRP7BPQ9NSQ0 103 aa14.76□□□□□ -0.05
CSMD2-204ENST00000373380 CCDC136Q96JN2 1154 aa14.76□□□□□ -0.05
CSMD2-204ENST00000373380 KIF27Q86VH2 1401 aa14.75□□□□□ -0.05
CSMD2-204ENST00000373380 KDM2AQ9Y2K7 1162 aa14.75□□□□□ -0.05
CSMD2-204ENST00000373380 SENP3-EIF4A1A0A087X0R7 540 aa14.74□□□□□ -0.05
CSMD2-204ENST00000373380 EIF4G1Q04637 1599 aaKnown RBP14.74□□□□□ -0.05
CSMD2-204ENST00000373380 ZBTB47Q9UFB7 747 aaPredicted RBP14.73□□□□□ -0.05
CSMD2-204ENST00000373380 NBR1Q14596 966 aa14.72□□□□□ -0.05
CSMD2-204ENST00000373380 BICRAQ9NZM4 1560 aa14.71□□□□□ -0.05
CSMD2-204ENST00000373380 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.71□□□□□ -0.05
CSMD2-204ENST00000373380 SIN3AQ96ST3 1273 aa14.71□□□□□ -0.06
CSMD2-204ENST00000373380 EIF4G2P78344 907 aaKnown RBP eCLIP14.7□□□□□ -0.06
CSMD2-204ENST00000373380 UNC13AQ9UPW8 1703 aa14.69□□□□□ -0.06
CSMD2-204ENST00000373380 CHGAP10645 457 aaKnown RBP14.69□□□□□ -0.06
CSMD2-204ENST00000373380 GLIPR1L2Q4G1C9 344 aa14.68□□□□□ -0.06
CSMD2-204ENST00000373380 RAPGEF2Q9Y4G8 1499 aa14.68□□□□□ -0.06
CSMD2-204ENST00000373380 SLC24A1O60721 1099 aa14.67□□□□□ -0.06
CSMD2-204ENST00000373380 PEG3Q9GZU2 1588 aa14.65□□□□□ -0.06
CSMD2-204ENST00000373380 NEFMP07197 916 aa14.65□□□□□ -0.06
CSMD2-204ENST00000373380 SYNJ1O43426 1573 aa14.64□□□□□ -0.07
CSMD2-204ENST00000373380 TSPY4P0CV99 314 aa14.64□□□□□ -0.07
CSMD2-204ENST00000373380 TSPY10P0CW01 314 aa14.64□□□□□ -0.07
CSMD2-204ENST00000373380 SUPT16HQ9Y5B9 1047 aaKnown RBP14.64□□□□□ -0.07
CSMD2-204ENST00000373380 KIF21BO75037 1637 aa14.63□□□□□ -0.07
CSMD2-204ENST00000373380 ANP32EQ9BTT0 268 aa14.58□□□□□ -0.07
CSMD2-204ENST00000373380 NCAPD3P42695 1498 aa14.58□□□□□ -0.08
CSMD2-204ENST00000373380 WDR43Q15061 677 aaKnown RBP eCLIP14.55□□□□□ -0.08
CSMD2-204ENST00000373380 RGL3Q3MIN7 710 aa14.55□□□□□ -0.08
CSMD2-204ENST00000373380 CUX2O14529 1486 aa14.54□□□□□ -0.08
CSMD2-204ENST00000373380 KANK4Q5T7N3 995 aaPredicted RBP14.52□□□□□ -0.08
CSMD2-204ENST00000373380 CHMP7Q8WUX9 453 aaPredicted RBP14.52□□□□□ -0.08
CSMD2-204ENST00000373380 CARMIL1Q5VZK9 1371 aa14.51□□□□□ -0.09
CSMD2-204ENST00000373380 UPF2Q9HAU5 1272 aaKnown RBP14.51□□□□□ -0.09
CSMD2-204ENST00000373380 TOP2BQ02880 1626 aa14.51□□□□□ -0.09
CSMD2-204ENST00000373380 HSP90AA1P07900 732 aaKnown RBP14.51□□□□□ -0.09
CSMD2-204ENST00000373380 CCNB3Q8WWL7 1395 aa14.51□□□□□ -0.09
CSMD2-204ENST00000373380 ARXQ96QS3 562 aa14.5□□□□□ -0.09
CSMD2-204ENST00000373380 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.5□□□□□ -0.09
CSMD2-204ENST00000373380 CADPSQ9ULU8 1353 aa14.48□□□□□ -0.09
CSMD2-204ENST00000373380 SENP3Q9H4L4 574 aaPredicted RBP14.48□□□□□ -0.09
CSMD2-204ENST00000373380 ERICH3Q5RHP9 1530 aa14.48□□□□□ -0.09
CSMD2-204ENST00000373380 HMGXB3Q12766 1538 aa14.47□□□□□ -0.09
CSMD2-204ENST00000373380 STAG3Q9UJ98 1225 aa14.47□□□□□ -0.09
CSMD2-204ENST00000373380 PRXQ9BXM0 1461 aa14.45□□□□□ -0.1
CSMD2-204ENST00000373380 KCNH8Q96L42 1107 aa14.45□□□□□ -0.1
CSMD2-204ENST00000373380 CFDP1Q9UEE9 299 aaPredicted RBP14.45□□□□□ -0.1
CSMD2-204ENST00000373380 FHAD1B1AJZ9 1412 aa14.44□□□□□ -0.1
CSMD2-204ENST00000373380 CFTRP13569 1480 aa14.44□□□□□ -0.1
CSMD2-204ENST00000373380 PLEKHD1A6NEE1 506 aa14.43□□□□□ -0.1
CSMD2-204ENST00000373380 B4GALNT3Q6L9W6 998 aa14.43□□□□□ -0.1
CSMD2-204ENST00000373380 CARD11Q9BXL7 1154 aa14.43□□□□□ -0.1
CSMD2-204ENST00000373380 RTN4Q9NQC3 1192 aaKnown RBP14.41□□□□□ -0.1
CSMD2-204ENST00000373380 PPP4R2Q9NY27 417 aa14.4□□□□□ -0.1
CSMD2-204ENST00000373380 PLPPR3Q6T4P5 718 aa14.4□□□□□ -0.1
CSMD2-204ENST00000373380 NPM1P06748 294 aaKnown RBP eCLIP14.39□□□□□ -0.11
CSMD2-204ENST00000373380 CUX1P39880 1505 aa14.39□□□□□ -0.11
CSMD2-204ENST00000373380 ESF1Q9H501 851 aaKnown RBP14.38□□□□□ -0.11
CSMD2-204ENST00000373380 IGF1RP08069 1367 aa14.38□□□□□ -0.11
CSMD2-204ENST00000373380 DHX57Q6P158 1386 aaKnown RBP14.38□□□□□ -0.11
CSMD2-204ENST00000373380 ANP32BQ92688 251 aaKnown RBP14.37□□□□□ -0.11
CSMD2-204ENST00000373380 ARAP1Q96P48 1450 aa14.35□□□□□ -0.11
CSMD2-204ENST00000373380 BIVM-ERCC5R4GMW8 1640 aa14.33□□□□□ -0.11
CSMD2-204ENST00000373380 FOXD1Q16676 465 aa14.33□□□□□ -0.12
CSMD2-204ENST00000373380 NEUROD2Q15784 382 aa14.33□□□□□ -0.12
CSMD2-204ENST00000373380 KNSTRNQ9Y448 316 aa14.33□□□□□ -0.12
CSMD2-204ENST00000373380 RBM19Q9Y4C8 960 aaKnown RBP14.33□□□□□ -0.12
CSMD2-204ENST00000373380 SETD5Q9C0A6 1442 aa14.33□□□□□ -0.12
CSMD2-204ENST00000373380 TIMELESSQ9UNS1 1208 aa14.32□□□□□ -0.12
CSMD2-204ENST00000373380 HSPA5P11021 654 aaKnown RBP14.32□□□□□ -0.12
CSMD2-204ENST00000373380 FGD5Q6ZNL6 1462 aa14.31□□□□□ -0.12
CSMD2-204ENST00000373380 LAS1LQ9Y4W2 734 aaKnown RBP14.31□□□□□ -0.12
CSMD2-204ENST00000373380 RAB3GAP2Q9H2M9 1393 aa14.31□□□□□ -0.12
CSMD2-204ENST00000373380 CCER2I3L3R5 266 aa14.31□□□□□ -0.12
CSMD2-204ENST00000373380 FANCD2Q9BXW9 1451 aa14.3□□□□□ -0.12
CSMD2-204ENST00000373380 ARHGAP35Q9NRY4 1499 aa14.3□□□□□ -0.12
CSMD2-204ENST00000373380 CC2D1BQ5T0F9 858 aaKnown RBP14.3□□□□□ -0.12
CSMD2-204ENST00000373380 RGS3P49796 1198 aa14.29□□□□□ -0.12
CSMD2-204ENST00000373380 RRBP1Q9P2E9 1410 aaKnown RBP14.29□□□□□ -0.12
CSMD2-204ENST00000373380 DCAF11Q8TEB1 546 aa14.28□□□□□ -0.12
CSMD2-204ENST00000373380 DDRGK1Q96HY6 314 aa14.26□□□□□ -0.13
CSMD2-204ENST00000373380 PPP1R15AO75807 674 aaPredicted RBP14.26□□□□□ -0.13
CSMD2-204ENST00000373380 NOP58Q9Y2X3 529 aaKnown RBP14.25□□□□□ -0.13
CSMD2-204ENST00000373380 TSHZ2Q9NRE2 1034 aa14.25□□□□□ -0.13
CSMD2-204ENST00000373380 TNNT2P45379 298 aaPredicted RBP14.25□□□□□ -0.13
CSMD2-204ENST00000373380 FMN1Q68DA7 1419 aa14.24□□□□□ -0.13
CSMD2-204ENST00000373380 FHOD3Q2V2M9 1422 aa14.23□□□□□ -0.13
CSMD2-204ENST00000373380 BECN1Q14457 450 aa14.22□□□□□ -0.13
CSMD2-204ENST00000373380 PPM1GO15355 546 aaPredicted RBP14.22□□□□□ -0.13
CSMD2-204ENST00000373380 CDCA8Q53HL2 280 aa14.22□□□□□ -0.13
CSMD2-204ENST00000373380 FRAT1Q92837 279 aaPredicted RBP14.22□□□□□ -0.13
CSMD2-204ENST00000373380 PDS5BQ9NTI5 1447 aa14.2□□□□□ -0.14
CSMD2-204ENST00000373380 MYH16Q9H6N6 1097 aa14.19□□□□□ -0.14
CSMD2-204ENST00000373380 LRRC9Q6ZRR7 1453 aa14.19□□□□□ -0.14
CSMD2-204ENST00000373380 TDRD9Q8NDG6 1382 aaKnown RBP14.19□□□□□ -0.14
CSMD2-204ENST00000373380 PKD2Q13563 968 aa14.19□□□□□ -0.14
CSMD2-204ENST00000373380 PLEKHG5O94827 1062 aa14.19□□□□□ -0.14
CSMD2-204ENST00000373380 CFAP53Q96M91 514 aa14.19□□□□□ -0.14
CSMD2-204ENST00000373380 MPHOSPH9Q99550 1183 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 337.5 ms