RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 KIAA0586Q9BVV6 1533 aa31.16■■■□□ 2.58
TRAPPC3-202ENST00000373162 JPH4Q96JJ6 628 aa31.14■■■□□ 2.58
TRAPPC3-202ENST00000373162 CARMIL1Q5VZK9 1371 aa31.13■■■□□ 2.57
TRAPPC3-202ENST00000373162 TRHP20396 242 aaPredicted RBP31.07■■■□□ 2.56
TRAPPC3-202ENST00000373162 RAPGEF2Q9Y4G8 1499 aa30.92■■■□□ 2.54
TRAPPC3-202ENST00000373162 IQGAP2Q13576 1575 aa30.92■■■□□ 2.54
TRAPPC3-202ENST00000373162 ADCY10Q96PN6 1610 aa30.87■■■□□ 2.53
TRAPPC3-202ENST00000373162 PRXQ9BXM0 1461 aa30.81■■■□□ 2.52
TRAPPC3-202ENST00000373162 DISP1Q96F81 1524 aa30.79■■■□□ 2.52
TRAPPC3-202ENST00000373162 UGGT2Q9NYU1 1516 aa30.79■■■□□ 2.52
TRAPPC3-202ENST00000373162 KIF13AQ9H1H9 1805 aa30.77■■■□□ 2.52
TRAPPC3-202ENST00000373162 MAPKBP1O60336 1514 aa30.77■■■□□ 2.52
TRAPPC3-202ENST00000373162 CARMIL2Q6F5E8 1435 aa30.73■■■□□ 2.51
TRAPPC3-202ENST00000373162 CTTNBP2Q8WZ74 1663 aa30.72■■■□□ 2.51
TRAPPC3-202ENST00000373162 TNIKQ9UKE5 1360 aa30.72■■■□□ 2.51
TRAPPC3-202ENST00000373162 PTPRGP23470 1445 aa30.7■■■□□ 2.5
TRAPPC3-202ENST00000373162 KIAA0556O60303 1618 aa30.67■■■□□ 2.5
TRAPPC3-202ENST00000373162 ABCC10Q5T3U5 1492 aa30.64■■■□□ 2.5
TRAPPC3-202ENST00000373162 DIP2BQ9P265 1576 aa30.62■■■□□ 2.49
TRAPPC3-202ENST00000373162 UHRF1BP1LA0JNW5 1464 aa30.62■■■□□ 2.49
TRAPPC3-202ENST00000373162 ABCC2Q92887 1545 aa30.58■■■□□ 2.49
TRAPPC3-202ENST00000373162 UACAQ9BZF9 1416 aa30.53■■■□□ 2.48
TRAPPC3-202ENST00000373162 EEA1Q15075 1411 aa30.52■■■□□ 2.48
TRAPPC3-202ENST00000373162 NPM1P06748 294 aaKnown RBP eCLIP30.51■■■□□ 2.47
TRAPPC3-202ENST00000373162 KDM5BQ9UGL1 1544 aa30.48■■■□□ 2.47
TRAPPC3-202ENST00000373162 CSRNP3Q8WYN3 585 aa30.48■■■□□ 2.47
TRAPPC3-202ENST00000373162 GOLGA3Q08378 1498 aa30.45■■■□□ 2.47
TRAPPC3-202ENST00000373162 FAM69CQ0P6D2 419 aa30.42■■■□□ 2.46
TRAPPC3-202ENST00000373162 TTBK1Q5TCY1 1321 aaPredicted RBP30.41■■■□□ 2.46
TRAPPC3-202ENST00000373162 ABCA8O94911 1581 aa30.4■■■□□ 2.46
TRAPPC3-202ENST00000373162 ASXL2Q76L83 1435 aa30.39■■■□□ 2.46
TRAPPC3-202ENST00000373162 ZCCHC11Q5TAX3 1644 aaKnown RBP30.38■■■□□ 2.45
TRAPPC3-202ENST00000373162 PLB1Q6P1J6 1458 aa30.38■■■□□ 2.45
TRAPPC3-202ENST00000373162 GLI2P10070 1586 aa30.37■■■□□ 2.45
TRAPPC3-202ENST00000373162 SAMD9Q5K651 1589 aa30.37■■■□□ 2.45
TRAPPC3-202ENST00000373162 KIF21BO75037 1637 aa30.33■■■□□ 2.45
TRAPPC3-202ENST00000373162 PPRC1Q5VV67 1664 aaKnown RBP30.3■■■□□ 2.44
TRAPPC3-202ENST00000373162 CHIC1Q5VXU3 224 aa30.3■■■□□ 2.44
TRAPPC3-202ENST00000373162 EPRSP07814 1512 aaKnown RBP30.26■■■□□ 2.43
TRAPPC3-202ENST00000373162 TSPOAP1O95153 1857 aa30.23■■■□□ 2.43
TRAPPC3-202ENST00000373162 AEBP2Q6ZN18 517 aaPredicted RBP30.22■■■□□ 2.43
TRAPPC3-202ENST00000373162 MAP3K4Q9Y6R4 1608 aa30.22■■■□□ 2.43
TRAPPC3-202ENST00000373162 WDR7Q9Y4E6 1490 aa30.19■■■□□ 2.42
TRAPPC3-202ENST00000373162 KDM6BO15054 1643 aa30.16■■■□□ 2.42
TRAPPC3-202ENST00000373162 FAM9AQ8IZU1 332 aaPredicted RBP30.14■■■□□ 2.42
TRAPPC3-202ENST00000373162 RAPGEF6Q8TEU7 1601 aa30.08■■■□□ 2.41
TRAPPC3-202ENST00000373162 ATP10BO94823 1461 aa30.07■■■□□ 2.4
TRAPPC3-202ENST00000373162 P3H3Q8IVL6 736 aa30.07■■■□□ 2.4
TRAPPC3-202ENST00000373162 EFCAB5A4FU69 1503 aa30.06■■■□□ 2.4
TRAPPC3-202ENST00000373162 FHOD3Q2V2M9 1422 aa30.03■■■□□ 2.4
TRAPPC3-202ENST00000373162 CFAP43Q8NDM7 1665 aa30.01■■■□□ 2.4
TRAPPC3-202ENST00000373162 NUP153P49790 1475 aaKnown RBP30■■■□□ 2.39
TRAPPC3-202ENST00000373162 COL17A1Q9UMD9 1497 aaPredicted RBP30■■■□□ 2.39
TRAPPC3-202ENST00000373162 TEX14Q8IWB6 1497 aa29.98■■■□□ 2.39
TRAPPC3-202ENST00000373162 MAGI3Q5TCQ9 1506 aa29.96■■■□□ 2.39
TRAPPC3-202ENST00000373162 ABCA9Q8IUA7 1624 aa29.89■■■□□ 2.38
TRAPPC3-202ENST00000373162 CD109Q6YHK3 1445 aa29.89■■■□□ 2.38
TRAPPC3-202ENST00000373162 ARHGAP35Q9NRY4 1499 aa29.87■■■□□ 2.37
TRAPPC3-202ENST00000373162 ARID3CA6NKF2 412 aa29.83■■■□□ 2.37
TRAPPC3-202ENST00000373162 RANGAP1P46060 587 aaPredicted RBP29.83■■■□□ 2.37
TRAPPC3-202ENST00000373162 KCNH8Q96L42 1107 aa29.82■■■□□ 2.36
TRAPPC3-202ENST00000373162 UBTFP17480 764 aaKnown RBP29.77■■■□□ 2.36
TRAPPC3-202ENST00000373162 KDM4FA0A1W2PPD8 638 aa29.74■■■□□ 2.35
TRAPPC3-202ENST00000373162 ARAP3Q8WWN8 1544 aa29.72■■■□□ 2.35
TRAPPC3-202ENST00000373162 EHMT2Q96KQ7 1210 aa29.71■■■□□ 2.35
TRAPPC3-202ENST00000373162 FMN1Q68DA7 1419 aa29.71■■■□□ 2.35
TRAPPC3-202ENST00000373162 CDK13Q14004 1512 aaKnown RBP29.7■■■□□ 2.34
TRAPPC3-202ENST00000373162 HECW1Q76N89 1606 aa29.67■■■□□ 2.34
TRAPPC3-202ENST00000373162 NEO1Q92859 1461 aa29.64■■■□□ 2.34
TRAPPC3-202ENST00000373162 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.64■■■□□ 2.34
TRAPPC3-202ENST00000373162 PHLDB1Q86UU1 1377 aa29.63■■■□□ 2.33
TRAPPC3-202ENST00000373162 LRRIQ1Q96JM4 1722 aa29.62■■■□□ 2.33
TRAPPC3-202ENST00000373162 TTC37Q6PGP7 1564 aa29.61■■■□□ 2.33
TRAPPC3-202ENST00000373162 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.59■■■□□ 2.33
TRAPPC3-202ENST00000373162 HNRNPUL2Q1KMD3 747 aaKnown RBP29.59■■■□□ 2.33
TRAPPC3-202ENST00000373162 PLEKHD1A6NEE1 506 aa29.58■■■□□ 2.33
TRAPPC3-202ENST00000373162 FRMPD1Q5SYB0 1578 aa29.58■■■□□ 2.33
TRAPPC3-202ENST00000373162 ADGRL1O94910 1474 aa29.55■■■□□ 2.32
TRAPPC3-202ENST00000373162 PCF11O94913 1555 aaKnown RBP29.52■■■□□ 2.32
TRAPPC3-202ENST00000373162 CFAP74Q9C0B2 1584 aa29.48■■■□□ 2.31
TRAPPC3-202ENST00000373162 CASKIN1Q8WXD9 1431 aa29.48■■■□□ 2.31
TRAPPC3-202ENST00000373162 KIF14Q15058 1648 aa29.46■■■□□ 2.31
TRAPPC3-202ENST00000373162 RICTORQ6R327 1708 aa29.46■■■□□ 2.31
TRAPPC3-202ENST00000373162 FANCAO15360 1455 aa29.45■■■□□ 2.31
TRAPPC3-202ENST00000373162 TROQ12816 1431 aaPredicted RBP29.44■■■□□ 2.3
TRAPPC3-202ENST00000373162 CLIP1P30622 1438 aa29.43■■■□□ 2.3
TRAPPC3-202ENST00000373162 AKNAQ7Z591 1439 aa29.43■■■□□ 2.3
TRAPPC3-202ENST00000373162 PLCH2O75038 1416 aa29.42■■■□□ 2.3
TRAPPC3-202ENST00000373162 RAPGEF3O95398 923 aa29.4■■■□□ 2.3
TRAPPC3-202ENST00000373162 FYCO1Q9BQS8 1478 aa29.4■■■□□ 2.3
TRAPPC3-202ENST00000373162 CCDC18Q5T9S5 1454 aa29.39■■■□□ 2.3
TRAPPC3-202ENST00000373162 MYO5CQ9NQX4 1742 aa29.38■■■□□ 2.29
TRAPPC3-202ENST00000373162 ZMYM4Q5VZL5 1548 aa29.38■■■□□ 2.29
TRAPPC3-202ENST00000373162 DENND4BO75064 1496 aaPredicted RBP29.37■■■□□ 2.29
TRAPPC3-202ENST00000373162 ARHGEF40Q8TER5 1519 aa29.35■■■□□ 2.29
TRAPPC3-202ENST00000373162 ATP1B4Q9UN42 357 aaPredicted RBP29.32■■■□□ 2.28
TRAPPC3-202ENST00000373162 CDK11AQ9UQ88 783 aaPredicted RBP29.32■■■□□ 2.28
TRAPPC3-202ENST00000373162 ADAMTSL3P82987 1691 aa29.27■■■□□ 2.28
TRAPPC3-202ENST00000373162 POGZQ7Z3K3 1410 aa29.27■■■□□ 2.28
TRAPPC3-202ENST00000373162 CDC42BPBQ9Y5S2 1711 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms