RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 KIAA0586Q9BVV6 1533 aa38.71■■■■□ 3.79
COL9A2-201ENST00000372736 PRG4Q92954 1404 aaPredicted RBP38.71■■■■□ 3.79
COL9A2-201ENST00000372736 JPH4Q96JJ6 628 aa38.68■■■■□ 3.78
COL9A2-201ENST00000372736 RAPGEF2Q9Y4G8 1499 aa38.57■■■■□ 3.76
COL9A2-201ENST00000372736 IQGAP2Q13576 1575 aa38.49■■■■□ 3.75
COL9A2-201ENST00000372736 PRXQ9BXM0 1461 aa38.38■■■■□ 3.73
COL9A2-201ENST00000372736 TRHP20396 242 aaPredicted RBP38.36■■■■□ 3.73
COL9A2-201ENST00000372736 CTTNBP2Q8WZ74 1663 aa38.3■■■■□ 3.72
COL9A2-201ENST00000372736 UGGT2Q9NYU1 1516 aa38.28■■■■□ 3.72
COL9A2-201ENST00000372736 CARMIL2Q6F5E8 1435 aa38.26■■■■□ 3.72
COL9A2-201ENST00000372736 ADCY10Q96PN6 1610 aa38.25■■■■□ 3.71
COL9A2-201ENST00000372736 DISP1Q96F81 1524 aa38.24■■■■□ 3.71
COL9A2-201ENST00000372736 EEA1Q15075 1411 aa38.2■■■■□ 3.71
COL9A2-201ENST00000372736 TNIKQ9UKE5 1360 aa38.19■■■■□ 3.7
COL9A2-201ENST00000372736 PTPRGP23470 1445 aa38.17■■■■□ 3.7
COL9A2-201ENST00000372736 CSRNP3Q8WYN3 585 aa38.15■■■■□ 3.7
COL9A2-201ENST00000372736 KIAA0556O60303 1618 aa38.15■■■■□ 3.7
COL9A2-201ENST00000372736 CHIC1Q5VXU3 224 aa38.11■■■■□ 3.69
COL9A2-201ENST00000372736 MAPKBP1O60336 1514 aa38.06■■■■□ 3.68
COL9A2-201ENST00000372736 TTBK1Q5TCY1 1321 aaPredicted RBP38.03■■■■□ 3.68
COL9A2-201ENST00000372736 KIF13AQ9H1H9 1805 aa38.01■■■■□ 3.67
COL9A2-201ENST00000372736 GOLGA3Q08378 1498 aa37.97■■■■□ 3.67
COL9A2-201ENST00000372736 NPM1P06748 294 aaKnown RBP eCLIP37.97■■■■□ 3.67
COL9A2-201ENST00000372736 UHRF1BP1LA0JNW5 1464 aa37.96■■■■□ 3.67
COL9A2-201ENST00000372736 ABCC2Q92887 1545 aa37.94■■■■□ 3.66
COL9A2-201ENST00000372736 FAM9AQ8IZU1 332 aaPredicted RBP37.94■■■■□ 3.66
COL9A2-201ENST00000372736 UACAQ9BZF9 1416 aa37.93■■■■□ 3.66
COL9A2-201ENST00000372736 KIF21BO75037 1637 aa37.91■■■■□ 3.66
COL9A2-201ENST00000372736 ABCC10Q5T3U5 1492 aa37.89■■■■□ 3.66
COL9A2-201ENST00000372736 DIP2BQ9P265 1576 aa37.87■■■■□ 3.65
COL9A2-201ENST00000372736 SAMD9Q5K651 1589 aa37.8■■■■□ 3.64
COL9A2-201ENST00000372736 KDM5BQ9UGL1 1544 aa37.78■■■■□ 3.64
COL9A2-201ENST00000372736 PLB1Q6P1J6 1458 aa37.77■■■■□ 3.64
COL9A2-201ENST00000372736 ABCA8O94911 1581 aa37.75■■■■□ 3.63
COL9A2-201ENST00000372736 ZCCHC11Q5TAX3 1644 aaKnown RBP37.74■■■■□ 3.63
COL9A2-201ENST00000372736 FAM69CQ0P6D2 419 aa37.73■■■■□ 3.63
COL9A2-201ENST00000372736 ASXL2Q76L83 1435 aa37.71■■■■□ 3.63
COL9A2-201ENST00000372736 P3H3Q8IVL6 736 aa37.61■■■■□ 3.61
COL9A2-201ENST00000372736 GLI2P10070 1586 aa37.57■■■■□ 3.6
COL9A2-201ENST00000372736 TSPOAP1O95153 1857 aa37.53■■■■□ 3.6
COL9A2-201ENST00000372736 EFCAB5A4FU69 1503 aa37.52■■■■□ 3.6
COL9A2-201ENST00000372736 EPRSP07814 1512 aaKnown RBP37.51■■■■□ 3.59
COL9A2-201ENST00000372736 RANGAP1P46060 587 aaPredicted RBP37.5■■■■□ 3.59
COL9A2-201ENST00000372736 FHOD3Q2V2M9 1422 aa37.5■■■■□ 3.59
COL9A2-201ENST00000372736 WDR7Q9Y4E6 1490 aa37.49■■■■□ 3.59
COL9A2-201ENST00000372736 RAPGEF6Q8TEU7 1601 aa37.47■■■■□ 3.59
COL9A2-201ENST00000372736 EHMT2Q96KQ7 1210 aa37.47■■■■□ 3.59
COL9A2-201ENST00000372736 PPRC1Q5VV67 1664 aaKnown RBP37.44■■■■□ 3.58
COL9A2-201ENST00000372736 UBTFP17480 764 aaKnown RBP37.42■■■■□ 3.58
COL9A2-201ENST00000372736 MAP3K4Q9Y6R4 1608 aa37.42■■■■□ 3.58
COL9A2-201ENST00000372736 ATP10BO94823 1461 aa37.38■■■■□ 3.57
COL9A2-201ENST00000372736 NUP153P49790 1475 aaKnown RBP37.33■■■■□ 3.57
COL9A2-201ENST00000372736 KDM6BO15054 1643 aa37.32■■■■□ 3.56
COL9A2-201ENST00000372736 ARID3CA6NKF2 412 aa37.31■■■■□ 3.56
COL9A2-201ENST00000372736 ARHGAP35Q9NRY4 1499 aa37.28■■■■□ 3.56
COL9A2-201ENST00000372736 CFAP43Q8NDM7 1665 aa37.24■■■■□ 3.55
COL9A2-201ENST00000372736 TEX14Q8IWB6 1497 aa37.19■■■■□ 3.54
COL9A2-201ENST00000372736 KCNH8Q96L42 1107 aa37.18■■■■□ 3.54
COL9A2-201ENST00000372736 FMN1Q68DA7 1419 aa37.12■■■■□ 3.53
COL9A2-201ENST00000372736 CD109Q6YHK3 1445 aa37.12■■■■□ 3.53
COL9A2-201ENST00000372736 MAGI3Q5TCQ9 1506 aa37.12■■■■□ 3.53
COL9A2-201ENST00000372736 ABCA9Q8IUA7 1624 aa37.1■■■■□ 3.53
COL9A2-201ENST00000372736 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.07■■■■□ 3.52
COL9A2-201ENST00000372736 HNRNPUL2Q1KMD3 747 aaKnown RBP37.07■■■■□ 3.52
COL9A2-201ENST00000372736 COL17A1Q9UMD9 1497 aaPredicted RBP37.06■■■■□ 3.52
COL9A2-201ENST00000372736 HECW1Q76N89 1606 aa37.05■■■■□ 3.52
COL9A2-201ENST00000372736 CDK13Q14004 1512 aaKnown RBP37.04■■■■□ 3.52
COL9A2-201ENST00000372736 PLEKHD1A6NEE1 506 aa36.92■■■■□ 3.5
COL9A2-201ENST00000372736 CLIP1P30622 1438 aa36.91■■■■□ 3.5
COL9A2-201ENST00000372736 LRRIQ1Q96JM4 1722 aa36.9■■■■□ 3.5
COL9A2-201ENST00000372736 PCF11O94913 1555 aaKnown RBP36.89■■■■□ 3.5
COL9A2-201ENST00000372736 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.85■■■■□ 3.49
COL9A2-201ENST00000372736 TTC37Q6PGP7 1564 aa36.84■■■■□ 3.49
COL9A2-201ENST00000372736 ATP1B4Q9UN42 357 aaPredicted RBP36.84■■■■□ 3.49
COL9A2-201ENST00000372736 CASKIN1Q8WXD9 1431 aa36.83■■■■□ 3.49
COL9A2-201ENST00000372736 ARAP3Q8WWN8 1544 aa36.81■■■■□ 3.48
COL9A2-201ENST00000372736 NEO1Q92859 1461 aa36.78■■■■□ 3.48
COL9A2-201ENST00000372736 PHLDB1Q86UU1 1377 aa36.75■■■■□ 3.47
COL9A2-201ENST00000372736 FYCO1Q9BQS8 1478 aa36.75■■■■□ 3.47
COL9A2-201ENST00000372736 CCDC18Q5T9S5 1454 aa36.72■■■■□ 3.47
COL9A2-201ENST00000372736 KIF14Q15058 1648 aa36.7■■■■□ 3.47
COL9A2-201ENST00000372736 TROQ12816 1431 aaPredicted RBP36.69■■■■□ 3.46
COL9A2-201ENST00000372736 CDK11AQ9UQ88 783 aaPredicted RBP36.68■■■■□ 3.46
COL9A2-201ENST00000372736 CEP162Q5TB80 1403 aa36.68■■■■□ 3.46
COL9A2-201ENST00000372736 CFAP74Q9C0B2 1584 aa36.67■■■■□ 3.46
COL9A2-201ENST00000372736 FANCAO15360 1455 aa36.64■■■■□ 3.46
COL9A2-201ENST00000372736 AEBP2Q6ZN18 517 aaPredicted RBP36.64■■■■□ 3.46
COL9A2-201ENST00000372736 FRMPD1Q5SYB0 1578 aa36.63■■■■□ 3.45
COL9A2-201ENST00000372736 MYO5CQ9NQX4 1742 aa36.61■■■■□ 3.45
COL9A2-201ENST00000372736 PLCH2O75038 1416 aa36.59■■■■□ 3.45
COL9A2-201ENST00000372736 AKNAQ7Z591 1439 aa36.58■■■■□ 3.45
COL9A2-201ENST00000372736 KDM4FA0A1W2PPD8 638 aa36.56■■■■□ 3.44
COL9A2-201ENST00000372736 RICTORQ6R327 1708 aa36.54■■■■□ 3.44
COL9A2-201ENST00000372736 RAPGEF3O95398 923 aa36.53■■■■□ 3.44
COL9A2-201ENST00000372736 LOC105371045A0A1W2PR82 267 aa36.52■■■■□ 3.44
COL9A2-201ENST00000372736 ADGRL1O94910 1474 aa36.51■■■■□ 3.44
COL9A2-201ENST00000372736 DENND4BO75064 1496 aaPredicted RBP36.5■■■■□ 3.43
COL9A2-201ENST00000372736 PREX2Q70Z35 1606 aa36.41■■■■□ 3.42
COL9A2-201ENST00000372736 ARHGAP5Q13017 1502 aa36.41■■■■□ 3.42
COL9A2-201ENST00000372736 CDC42BPBQ9Y5S2 1711 aa36.41■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms