RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 ARAP1Q96P48 1450 aa41.24■■■■■ 4.19
ATPAF1-202ENST00000371937 SYNJ2O15056 1496 aa41.2■■■■■ 4.19
ATPAF1-202ENST00000371937 GRIN2AQ12879 1464 aa41.18■■■■■ 4.18
ATPAF1-202ENST00000371937 EFCAB5A4FU69 1503 aa41.14■■■■■ 4.18
ATPAF1-202ENST00000371937 CHMP7Q8WUX9 453 aaPredicted RBP41.14■■■■■ 4.18
ATPAF1-202ENST00000371937 IQGAP2Q13576 1575 aa41.04■■■■■ 4.16
ATPAF1-202ENST00000371937 FBLN2P98095 1184 aa41■■■■■ 4.15
ATPAF1-202ENST00000371937 KIAA0586Q9BVV6 1533 aa40.99■■■■■ 4.15
ATPAF1-202ENST00000371937 TRIM26Q12899 539 aaPredicted RBP40.98■■■■■ 4.15
ATPAF1-202ENST00000371937 APLP2Q06481 763 aa40.96■■■■■ 4.15
ATPAF1-202ENST00000371937 SAMD9Q5K651 1589 aa40.95■■■■■ 4.15
ATPAF1-202ENST00000371937 PPARGC1BQ86YN6 1023 aaKnown RBP40.92■■■■■ 4.14
ATPAF1-202ENST00000371937 P3H3Q8IVL6 736 aa40.91■■■■■ 4.14
ATPAF1-202ENST00000371937 NUP160Q12769 1436 aa40.89■■■■■ 4.14
ATPAF1-202ENST00000371937 FHOD3Q2V2M9 1422 aa40.89■■■■■ 4.14
ATPAF1-202ENST00000371937 CEP170Q5SW79 1584 aa40.87■■■■■ 4.13
ATPAF1-202ENST00000371937 PCGF6Q9BYE7 350 aa40.87■■■■■ 4.13
ATPAF1-202ENST00000371937 UGGT2Q9NYU1 1516 aa40.85■■■■■ 4.13
ATPAF1-202ENST00000371937 FMN1Q68DA7 1419 aa40.79■■■■■ 4.12
ATPAF1-202ENST00000371937 CHD1O14646 1710 aa40.72■■■■■ 4.11
ATPAF1-202ENST00000371937 CASKIN1Q8WXD9 1431 aa40.66■■■■■ 4.1
ATPAF1-202ENST00000371937 FYCO1Q9BQS8 1478 aa40.65■■■■■ 4.1
ATPAF1-202ENST00000371937 PCF11O94913 1555 aaKnown RBP40.65■■■■■ 4.1
ATPAF1-202ENST00000371937 TTBK1Q5TCY1 1321 aaPredicted RBP40.63■■■■■ 4.1
ATPAF1-202ENST00000371937 MAP3K1Q13233 1512 aa40.63■■■■■ 4.09
ATPAF1-202ENST00000371937 DISP1Q96F81 1524 aa40.61■■■■■ 4.09
ATPAF1-202ENST00000371937 KIAA0556O60303 1618 aa40.6■■■■■ 4.09
ATPAF1-202ENST00000371937 JPH4Q96JJ6 628 aa40.6■■■■■ 4.09
ATPAF1-202ENST00000371937 CARMIL2Q6F5E8 1435 aa40.52■■■■■ 4.08
ATPAF1-202ENST00000371937 TIAM1Q13009 1591 aa40.52■■■■■ 4.08
ATPAF1-202ENST00000371937 ATP1B4Q9UN42 357 aaPredicted RBP40.51■■■■■ 4.07
ATPAF1-202ENST00000371937 KANK4Q5T7N3 995 aaPredicted RBP40.48■■■■■ 4.07
ATPAF1-202ENST00000371937 CFAP43Q8NDM7 1665 aa40.43■■■■■ 4.06
ATPAF1-202ENST00000371937 LRRC9Q6ZRR7 1453 aa40.35■■■■■ 4.05
ATPAF1-202ENST00000371937 HECW1Q76N89 1606 aa40.33■■■■■ 4.05
ATPAF1-202ENST00000371937 PRG4Q92954 1404 aaPredicted RBP40.32■■■■■ 4.05
ATPAF1-202ENST00000371937 SHROOM2Q13796 1616 aa40.32■■■■■ 4.04
ATPAF1-202ENST00000371937 CCDC18Q5T9S5 1454 aa40.28■■■■■ 4.04
ATPAF1-202ENST00000371937 CLASP1Q7Z460 1538 aa40.28■■■■■ 4.04
ATPAF1-202ENST00000371937 LRRIQ1Q96JM4 1722 aa40.24■■■■■ 4.03
ATPAF1-202ENST00000371937 RAPGEF6Q8TEU7 1601 aa40.2■■■■■ 4.03
ATPAF1-202ENST00000371937 EPRSP07814 1512 aaKnown RBP40.18■■■■■ 4.02
ATPAF1-202ENST00000371937 MTUS2Q5JR59 1369 aa40.13■■■■■ 4.01
ATPAF1-202ENST00000371937 PTPRGP23470 1445 aa40.09■■■■■ 4.01
ATPAF1-202ENST00000371937 NUP153P49790 1475 aaKnown RBP40.09■■■■■ 4.01
ATPAF1-202ENST00000371937 PLB1Q6P1J6 1458 aa40.09■■■■■ 4.01
ATPAF1-202ENST00000371937 EHBP1L1Q8N3D4 1523 aa40.04■■■■■ 4
ATPAF1-202ENST00000371937 RRBP1Q9P2E9 1410 aaKnown RBP40.04■■■■■ 4
ATPAF1-202ENST00000371937 CDK13Q14004 1512 aaKnown RBP40.03■■■■■ 4
ATPAF1-202ENST00000371937 ABCA8O94911 1581 aa40.02■■■■■ 4
ATPAF1-202ENST00000371937 OSCARQ8IYS5 282 aa40.02■■■■■ 4
ATPAF1-202ENST00000371937 ERCC6L2Q5T890 1561 aa39.97■■■■□ 3.99
ATPAF1-202ENST00000371937 PHLDB1Q86UU1 1377 aa39.95■■■■□ 3.99
ATPAF1-202ENST00000371937 ARID3CA6NKF2 412 aa39.94■■■■□ 3.98
ATPAF1-202ENST00000371937 CDK11AQ9UQ88 783 aaPredicted RBP39.94■■■■□ 3.98
ATPAF1-202ENST00000371937 CCNB3Q8WWL7 1395 aa39.93■■■■□ 3.98
ATPAF1-202ENST00000371937 MAGI3Q5TCQ9 1506 aa39.93■■■■□ 3.98
ATPAF1-202ENST00000371937 SUPT6HQ7KZ85 1726 aaKnown RBP39.92■■■■□ 3.98
ATPAF1-202ENST00000371937 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.88■■■■□ 3.98
ATPAF1-202ENST00000371937 HNRNPUL2Q1KMD3 747 aaKnown RBP39.88■■■■□ 3.98
ATPAF1-202ENST00000371937 NCOA2Q15596 1464 aa39.86■■■■□ 3.97
ATPAF1-202ENST00000371937 UACAQ9BZF9 1416 aa39.86■■■■□ 3.97
ATPAF1-202ENST00000371937 ARHGEF11O15085 1522 aa39.79■■■■□ 3.96
ATPAF1-202ENST00000371937 ATP10BO94823 1461 aa39.77■■■■□ 3.96
ATPAF1-202ENST00000371937 TROQ12816 1431 aaPredicted RBP39.73■■■■□ 3.95
ATPAF1-202ENST00000371937 MYOM3Q5VTT5 1437 aa39.72■■■■□ 3.95
ATPAF1-202ENST00000371937 ABCC2Q92887 1545 aa39.72■■■■□ 3.95
ATPAF1-202ENST00000371937 FGD6Q6ZV73 1430 aa39.71■■■■□ 3.95
ATPAF1-202ENST00000371937 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.69■■■■□ 3.94
ATPAF1-202ENST00000371937 PLEKHD1A6NEE1 506 aa39.68■■■■□ 3.94
ATPAF1-202ENST00000371937 UHRF1BP1LA0JNW5 1464 aa39.65■■■■□ 3.94
ATPAF1-202ENST00000371937 FAM50AQ14320 339 aaKnown RBP39.64■■■■□ 3.94
ATPAF1-202ENST00000371937 HRCP23327 699 aa39.6■■■■□ 3.93
ATPAF1-202ENST00000371937 ADCY10Q96PN6 1610 aa39.59■■■■□ 3.93
ATPAF1-202ENST00000371937 MIA2Q96PC5 1412 aa39.55■■■■□ 3.92
ATPAF1-202ENST00000371937 ITGAEP38570 1179 aa39.51■■■■□ 3.92
ATPAF1-202ENST00000371937 PTPN23Q9H3S7 1636 aa39.49■■■■□ 3.91
ATPAF1-202ENST00000371937 KIF14Q15058 1648 aa39.48■■■■□ 3.91
ATPAF1-202ENST00000371937 KDM5BQ9UGL1 1544 aa39.48■■■■□ 3.91
ATPAF1-202ENST00000371937 TCOF1Q13428 1488 aaKnown RBP39.45■■■■□ 3.91
ATPAF1-202ENST00000371937 ZCCHC11Q5TAX3 1644 aaKnown RBP39.41■■■■□ 3.9
ATPAF1-202ENST00000371937 ITSN2Q9NZM3 1697 aa39.39■■■■□ 3.9
ATPAF1-202ENST00000371937 ABCC10Q5T3U5 1492 aa39.36■■■■□ 3.89
ATPAF1-202ENST00000371937 CCER1Q8TC90 406 aaPredicted RBP39.36■■■■□ 3.89
ATPAF1-202ENST00000371937 GPATCH8Q9UKJ3 1502 aaKnown RBP39.36■■■■□ 3.89
ATPAF1-202ENST00000371937 ZEB1P37275 1124 aaPredicted RBP39.33■■■■□ 3.89
ATPAF1-202ENST00000371937 CFDP1Q9UEE9 299 aaPredicted RBP39.3■■■■□ 3.88
ATPAF1-202ENST00000371937 CDC42BPAQ5VT25 1732 aa39.23■■■■□ 3.87
ATPAF1-202ENST00000371937 SETD5Q9C0A6 1442 aa39.21■■■■□ 3.87
ATPAF1-202ENST00000371937 PTPRKQ15262 1439 aa39.19■■■■□ 3.86
ATPAF1-202ENST00000371937 NPM1P06748 294 aaKnown RBP eCLIP39.16■■■■□ 3.86
ATPAF1-202ENST00000371937 CAMSAP2Q08AD1 1489 aa39.16■■■■□ 3.86
ATPAF1-202ENST00000371937 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.15■■■■□ 3.86
ATPAF1-202ENST00000371937 ZNF644Q9H582 1327 aaPredicted RBP39.15■■■■□ 3.86
ATPAF1-202ENST00000371937 KCNH8Q96L42 1107 aa39.14■■■■□ 3.86
ATPAF1-202ENST00000371937 RAB3GAP2Q9H2M9 1393 aa39.13■■■■□ 3.85
ATPAF1-202ENST00000371937 WDR7Q9Y4E6 1490 aa39.11■■■■□ 3.85
ATPAF1-202ENST00000371937 TTC37Q6PGP7 1564 aa39.1■■■■□ 3.85
ATPAF1-202ENST00000371937 ZNF777Q9ULD5 760 aaPredicted RBP39.1■■■■□ 3.85
ATPAF1-202ENST00000371937 PREX2Q70Z35 1606 aa39.1■■■■□ 3.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms