RNA–Protein interactions for RNA: ENST00000371648.4

EDF1-202, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 1 (best) BASIC

Gene EDF1, Length 809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-202ENST00000371648 RUSC2Q8N2Y8 1516 aa24.71■■□□□ 1.55
EDF1-202ENST00000371648 KIAA0586Q9BVV6 1533 aa24.65■■□□□ 1.54
EDF1-202ENST00000371648 CUL7Q14999 1698 aa24.62■■□□□ 1.53
EDF1-202ENST00000371648 CARMIL1Q5VZK9 1371 aa24.62■■□□□ 1.53
EDF1-202ENST00000371648 NPM1P06748 294 aaKnown RBP eCLIP24.6■■□□□ 1.53
EDF1-202ENST00000371648 FAM69CQ0P6D2 419 aa24.51■■□□□ 1.51
EDF1-202ENST00000371648 TTBK1Q5TCY1 1321 aaPredicted RBP24.51■■□□□ 1.51
EDF1-202ENST00000371648 ADCY10Q96PN6 1610 aa24.48■■□□□ 1.51
EDF1-202ENST00000371648 KIF13AQ9H1H9 1805 aa24.47■■□□□ 1.51
EDF1-202ENST00000371648 AEBP2Q6ZN18 517 aaPredicted RBP24.47■■□□□ 1.51
EDF1-202ENST00000371648 PTPRGP23470 1445 aa24.46■■□□□ 1.51
EDF1-202ENST00000371648 ABCC10Q5T3U5 1492 aa24.45■■□□□ 1.51
EDF1-202ENST00000371648 MAPKBP1O60336 1514 aa24.43■■□□□ 1.5
EDF1-202ENST00000371648 CARMIL2Q6F5E8 1435 aa24.42■■□□□ 1.5
EDF1-202ENST00000371648 TNIKQ9UKE5 1360 aa24.4■■□□□ 1.5
EDF1-202ENST00000371648 IQGAP2Q13576 1575 aa24.38■■□□□ 1.49
EDF1-202ENST00000371648 RAPGEF2Q9Y4G8 1499 aa24.37■■□□□ 1.49
EDF1-202ENST00000371648 DIP2BQ9P265 1576 aa24.35■■□□□ 1.49
EDF1-202ENST00000371648 DISP1Q96F81 1524 aa24.29■■□□□ 1.48
EDF1-202ENST00000371648 ABCC2Q92887 1545 aa24.27■■□□□ 1.48
EDF1-202ENST00000371648 UACAQ9BZF9 1416 aa24.25■■□□□ 1.47
EDF1-202ENST00000371648 UGGT2Q9NYU1 1516 aa24.24■■□□□ 1.47
EDF1-202ENST00000371648 UHRF1BP1LA0JNW5 1464 aa24.22■■□□□ 1.47
EDF1-202ENST00000371648 ASXL2Q76L83 1435 aa24.21■■□□□ 1.47
EDF1-202ENST00000371648 TSPOAP1O95153 1857 aa24.19■■□□□ 1.46
EDF1-202ENST00000371648 PLB1Q6P1J6 1458 aa24.19■■□□□ 1.46
EDF1-202ENST00000371648 CHIC1Q5VXU3 224 aa24.17■■□□□ 1.46
EDF1-202ENST00000371648 KIAA0556O60303 1618 aa24.16■■□□□ 1.46
EDF1-202ENST00000371648 KDM6BO15054 1643 aa24.15■■□□□ 1.46
EDF1-202ENST00000371648 KDM5BQ9UGL1 1544 aa24.11■■□□□ 1.45
EDF1-202ENST00000371648 PRXQ9BXM0 1461 aa24.11■■□□□ 1.45
EDF1-202ENST00000371648 GLI2P10070 1586 aa24.08■■□□□ 1.45
EDF1-202ENST00000371648 FAM9AQ8IZU1 332 aaPredicted RBP24.08■■□□□ 1.45
EDF1-202ENST00000371648 CSRNP3Q8WYN3 585 aa24.07■■□□□ 1.44
EDF1-202ENST00000371648 CTTNBP2Q8WZ74 1663 aa24.07■■□□□ 1.44
EDF1-202ENST00000371648 GOLGA3Q08378 1498 aa24.06■■□□□ 1.44
EDF1-202ENST00000371648 EPRSP07814 1512 aaKnown RBP24.05■■□□□ 1.44
EDF1-202ENST00000371648 ZCCHC11Q5TAX3 1644 aaKnown RBP24.04■■□□□ 1.44
EDF1-202ENST00000371648 PPRC1Q5VV67 1664 aaKnown RBP24■■□□□ 1.43
EDF1-202ENST00000371648 P3H3Q8IVL6 736 aa23.99■■□□□ 1.43
EDF1-202ENST00000371648 EEA1Q15075 1411 aa23.99■■□□□ 1.43
EDF1-202ENST00000371648 KDM4FA0A1W2PPD8 638 aa23.98■■□□□ 1.43
EDF1-202ENST00000371648 WDR7Q9Y4E6 1490 aa23.96■■□□□ 1.43
EDF1-202ENST00000371648 KCNH8Q96L42 1107 aa23.95■■□□□ 1.42
EDF1-202ENST00000371648 ABCA8O94911 1581 aa23.95■■□□□ 1.42
EDF1-202ENST00000371648 MAP3K4Q9Y6R4 1608 aa23.94■■□□□ 1.42
EDF1-202ENST00000371648 COL17A1Q9UMD9 1497 aaPredicted RBP23.93■■□□□ 1.42
EDF1-202ENST00000371648 ARID3CA6NKF2 412 aa23.92■■□□□ 1.42
EDF1-202ENST00000371648 TEX14Q8IWB6 1497 aa23.92■■□□□ 1.42
EDF1-202ENST00000371648 CD109Q6YHK3 1445 aa23.85■■□□□ 1.41
EDF1-202ENST00000371648 RANGAP1P46060 587 aaPredicted RBP23.85■■□□□ 1.41
EDF1-202ENST00000371648 EHMT2Q96KQ7 1210 aa23.82■■□□□ 1.4
EDF1-202ENST00000371648 ATP10BO94823 1461 aa23.8■■□□□ 1.4
EDF1-202ENST00000371648 MAGI3Q5TCQ9 1506 aa23.78■■□□□ 1.4
EDF1-202ENST00000371648 SAMD9Q5K651 1589 aa23.76■■□□□ 1.39
EDF1-202ENST00000371648 CFAP43Q8NDM7 1665 aa23.76■■□□□ 1.39
EDF1-202ENST00000371648 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.75■■□□□ 1.39
EDF1-202ENST00000371648 HNRNPUL2Q1KMD3 747 aaKnown RBP23.75■■□□□ 1.39
EDF1-202ENST00000371648 ADGRL1O94910 1474 aa23.75■■□□□ 1.39
EDF1-202ENST00000371648 UBTFP17480 764 aaKnown RBP23.73■■□□□ 1.39
EDF1-202ENST00000371648 KIF21BO75037 1637 aa23.7■■□□□ 1.39
EDF1-202ENST00000371648 FHOD3Q2V2M9 1422 aa23.69■■□□□ 1.38
EDF1-202ENST00000371648 RAPGEF6Q8TEU7 1601 aa23.69■■□□□ 1.38
EDF1-202ENST00000371648 NUP153P49790 1475 aaKnown RBP23.63■■□□□ 1.37
EDF1-202ENST00000371648 ABCA9Q8IUA7 1624 aa23.6■■□□□ 1.37
EDF1-202ENST00000371648 ARAP3Q8WWN8 1544 aa23.59■■□□□ 1.37
EDF1-202ENST00000371648 PLEKHD1A6NEE1 506 aa23.58■■□□□ 1.37
EDF1-202ENST00000371648 PHLDB1Q86UU1 1377 aa23.56■■□□□ 1.36
EDF1-202ENST00000371648 RAPGEF3O95398 923 aa23.56■■□□□ 1.36
EDF1-202ENST00000371648 EFCAB5A4FU69 1503 aa23.54■■□□□ 1.36
EDF1-202ENST00000371648 NEO1Q92859 1461 aa23.5■■□□□ 1.35
EDF1-202ENST00000371648 ATP1B4Q9UN42 357 aaPredicted RBP23.48■■□□□ 1.35
EDF1-202ENST00000371648 CDK13Q14004 1512 aaKnown RBP23.42■■□□□ 1.34
EDF1-202ENST00000371648 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.41■■□□□ 1.349e-7■■■□□ 17.5
EDF1-202ENST00000371648 AKNAQ7Z591 1439 aa23.4■■□□□ 1.34
EDF1-202ENST00000371648 HECW2Q9P2P5 1572 aa23.39■■□□□ 1.33
EDF1-202ENST00000371648 ARID4BQ4LE39 1312 aaPredicted RBP23.38■■□□□ 1.33
EDF1-202ENST00000371648 FANCAO15360 1455 aa23.38■■□□□ 1.33
EDF1-202ENST00000371648 ARHGAP35Q9NRY4 1499 aa23.38■■□□□ 1.33
EDF1-202ENST00000371648 FMN1Q68DA7 1419 aa23.38■■□□□ 1.33
EDF1-202ENST00000371648 FRMPD1Q5SYB0 1578 aa23.38■■□□□ 1.33
EDF1-202ENST00000371648 DENND4BO75064 1496 aaPredicted RBP23.37■■□□□ 1.33
EDF1-202ENST00000371648 TTC37Q6PGP7 1564 aa23.35■■□□□ 1.33
EDF1-202ENST00000371648 CDK11AQ9UQ88 783 aaPredicted RBP23.31■■□□□ 1.32
EDF1-202ENST00000371648 CFAP74Q9C0B2 1584 aa23.3■■□□□ 1.32
EDF1-202ENST00000371648 HECW1Q76N89 1606 aa23.3■■□□□ 1.32
EDF1-202ENST00000371648 PLCH2O75038 1416 aa23.29■■□□□ 1.32
EDF1-202ENST00000371648 ADAMTSL3P82987 1691 aa23.28■■□□□ 1.32
EDF1-202ENST00000371648 PTPRMP28827 1452 aa23.28■■□□□ 1.32
EDF1-202ENST00000371648 RICTORQ6R327 1708 aa23.28■■□□□ 1.32
EDF1-202ENST00000371648 LOC105371045A0A1W2PR82 267 aa23.27■■□□□ 1.32
EDF1-202ENST00000371648 ARHGEF40Q8TER5 1519 aa23.25■■□□□ 1.31
EDF1-202ENST00000371648 SCAPERQ9BY12 1400 aa23.25■■□□□ 1.31
EDF1-202ENST00000371648 EFCAB2Q5VUJ9 269 aa23.24■■□□□ 1.31
EDF1-202ENST00000371648 ILDR1Q86SU0 546 aaPredicted RBP23.24■■□□□ 1.31
EDF1-202ENST00000371648 BCORL1Q5H9F3 1711 aa23.23■■□□□ 1.31
EDF1-202ENST00000371648 YEATS2Q9ULM3 1422 aa23.23■■□□□ 1.31
EDF1-202ENST00000371648 CLIP1P30622 1438 aa23.22■■□□□ 1.31
EDF1-202ENST00000371648 TROQ12816 1431 aaPredicted RBP23.21■■□□□ 1.31
EDF1-202ENST00000371648 ZMYM4Q5VZL5 1548 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms