RNA–Protein interactions for RNA: ENST00000370532.3

CDR1-201, Transcript of cerebellar degeneration related protein 1, humanhuman

APPRIS P1 BASIC

Gene CDR1, Length 2,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-201ENST00000370532 HOXD11P31277 338 aaPredicted RBP7.34□□□□□ -1.23
CDR1-201ENST00000370532 CUX1P39880 1505 aa7.33□□□□□ -1.24
CDR1-201ENST00000370532 FGD5Q6ZNL6 1462 aa7.33□□□□□ -1.24
CDR1-201ENST00000370532 SOGA1O94964 1423 aa7.33□□□□□ -1.24
CDR1-201ENST00000370532 SYNJ2O15056 1496 aa7.33□□□□□ -1.24
CDR1-201ENST00000370532 FOXD4L1Q9NU39 408 aa7.33□□□□□ -1.24
CDR1-201ENST00000370532 TOP2BQ02880 1626 aa7.31□□□□□ -1.24
CDR1-201ENST00000370532 TTBK1Q5TCY1 1321 aaPredicted RBP7.31□□□□□ -1.24
CDR1-201ENST00000370532 ERICH3Q5RHP9 1530 aa7.3□□□□□ -1.24
CDR1-201ENST00000370532 SNAPC4Q5SXM2 1469 aa7.29□□□□□ -1.24
CDR1-201ENST00000370532 AQRO60306 1485 aaKnown RBP eCLIP7.28□□□□□ -1.24
CDR1-201ENST00000370532 GAPVD1Q14C86 1478 aa7.28□□□□□ -1.24
CDR1-201ENST00000370532 SHROOM2Q13796 1616 aa7.28□□□□□ -1.24
CDR1-201ENST00000370532 SUPT5HO00267 1087 aaKnown RBP7.28□□□□□ -1.24
CDR1-201ENST00000370532 ADAMTS12P58397 1594 aa7.28□□□□□ -1.24
CDR1-201ENST00000370532 ARAP1Q96P48 1450 aa7.27□□□□□ -1.25
CDR1-201ENST00000370532 SLC24A1O60721 1099 aa7.27□□□□□ -1.25
CDR1-201ENST00000370532 WRNQ14191 1432 aaPredicted RBP eCLIP7.26□□□□□ -1.25
CDR1-201ENST00000370532 RAD54L2Q9Y4B4 1467 aa7.26□□□□□ -1.25
CDR1-201ENST00000370532 NUP160Q12769 1436 aa7.25□□□□□ -1.25
CDR1-201ENST00000370532 FHAD1B1AJZ9 1412 aa7.24□□□□□ -1.25
CDR1-201ENST00000370532 BCL11AQ9H165 835 aa7.23□□□□□ -1.25
CDR1-201ENST00000370532 GRIN2AQ12879 1464 aa7.23□□□□□ -1.25
CDR1-201ENST00000370532 CUL7Q14999 1698 aa7.22□□□□□ -1.25
CDR1-201ENST00000370532 TRIM41Q8WV44 630 aa7.22□□□□□ -1.25
CDR1-201ENST00000370532 TDRD9Q8NDG6 1382 aaKnown RBP7.21□□□□□ -1.26
CDR1-201ENST00000370532 POTEHQ6S545 545 aa7.21□□□□□ -1.26
CDR1-201ENST00000370532 CACNB1Q02641 598 aaPredicted RBP7.2□□□□□ -1.26
CDR1-201ENST00000370532 FAM9AQ8IZU1 332 aaPredicted RBP7.2□□□□□ -1.26
CDR1-201ENST00000370532 ATF5Q9Y2D1 282 aaPredicted RBP7.2□□□□□ -1.26
CDR1-201ENST00000370532 CHMP7Q8WUX9 453 aaPredicted RBP7.19□□□□□ -1.26
CDR1-201ENST00000370532 DCAF8L1A6NGE4 600 aa7.18□□□□□ -1.26
CDR1-201ENST00000370532 CEP170Q5SW79 1584 aa7.18□□□□□ -1.26
CDR1-201ENST00000370532 RUSC2Q8N2Y8 1516 aa7.16□□□□□ -1.26
CDR1-201ENST00000370532 MAPKBP1O60336 1514 aa7.14□□□□□ -1.27
CDR1-201ENST00000370532 KIAA0586Q9BVV6 1533 aa7.13□□□□□ -1.27
CDR1-201ENST00000370532 KIF27Q86VH2 1401 aa7.12□□□□□ -1.27
CDR1-201ENST00000370532 PCGF6Q9BYE7 350 aa7.12□□□□□ -1.27
CDR1-201ENST00000370532 CYB5RLQ6IPT4 315 aa7.11□□□□□ -1.27
CDR1-201ENST00000370532 FBLN2P98095 1184 aa7.1□□□□□ -1.27
CDR1-201ENST00000370532 KIF13AQ9H1H9 1805 aa7.09□□□□□ -1.27
CDR1-201ENST00000370532 UHRF1BP1LA0JNW5 1464 aa7.09□□□□□ -1.27
CDR1-201ENST00000370532 APLP2Q06481 763 aa7.08□□□□□ -1.28
CDR1-201ENST00000370532 GLI2P10070 1586 aa7.08□□□□□ -1.28
CDR1-201ENST00000370532 PRG4Q92954 1404 aaPredicted RBP7.07□□□□□ -1.28
CDR1-201ENST00000370532 ABCC10Q5T3U5 1492 aa7.06□□□□□ -1.28
CDR1-201ENST00000370532 ERCC6L2Q5T890 1561 aa7.06□□□□□ -1.28
CDR1-201ENST00000370532 IGF1RP08069 1367 aa7.05□□□□□ -1.28
CDR1-201ENST00000370532 UGGT2Q9NYU1 1516 aa7.05□□□□□ -1.28
CDR1-201ENST00000370532 DIP2BQ9P265 1576 aa7.05□□□□□ -1.28
CDR1-201ENST00000370532 U3KPZ7 1027 aaPredicted RBP7.05□□□□□ -1.28
CDR1-201ENST00000370532 IQGAP2Q13576 1575 aa7.04□□□□□ -1.28
CDR1-201ENST00000370532 CARMIL2Q6F5E8 1435 aa7.04□□□□□ -1.28
CDR1-201ENST00000370532 ADCY10Q96PN6 1610 aa7.04□□□□□ -1.28
CDR1-201ENST00000370532 MYCNP04198 464 aaPredicted RBP7.04□□□□□ -1.28
CDR1-201ENST00000370532 JPH4Q96JJ6 628 aa7.03□□□□□ -1.28
CDR1-201ENST00000370532 ERICH6Q7L0X2 663 aa7.03□□□□□ -1.28
CDR1-201ENST00000370532 ACIN1Q9UKV3 1341 aaKnown RBP7.02□□□□□ -1.29
CDR1-201ENST00000370532 CTTNBP2Q8WZ74 1663 aa7.02□□□□□ -1.29
CDR1-201ENST00000370532 PLB1Q6P1J6 1458 aa7.02□□□□□ -1.29
CDR1-201ENST00000370532 NEUROD1Q13562 356 aa7.02□□□□□ -1.29
CDR1-201ENST00000370532 TNIKQ9UKE5 1360 aa7.01□□□□□ -1.29
CDR1-201ENST00000370532 CARMIL1Q5VZK9 1371 aa7.01□□□□□ -1.29
CDR1-201ENST00000370532 ABCC2Q92887 1545 aa7.01□□□□□ -1.29
CDR1-201ENST00000370532 TRHP20396 242 aaPredicted RBP7.01□□□□□ -1.29
CDR1-201ENST00000370532 GTF3C3Q9Y5Q9 886 aa7.01□□□□□ -1.29
CDR1-201ENST00000370532 GOLGA3Q08378 1498 aa7□□□□□ -1.29
CDR1-201ENST00000370532 RAPGEF2Q9Y4G8 1499 aa7□□□□□ -1.29
CDR1-201ENST00000370532 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7□□□□□ -1.29
CDR1-201ENST00000370532 KDM5BQ9UGL1 1544 aa6.99□□□□□ -1.29
CDR1-201ENST00000370532 KIAA0556O60303 1618 aa6.98□□□□□ -1.29
CDR1-201ENST00000370532 NPM1P06748 294 aaKnown RBP eCLIP6.98□□□□□ -1.29
CDR1-201ENST00000370532 CENPBP07199 599 aaPredicted RBP6.98□□□□□ -1.29
CDR1-201ENST00000370532 EEA1Q15075 1411 aa6.97□□□□□ -1.29
CDR1-201ENST00000370532 MAP3K4Q9Y6R4 1608 aa6.97□□□□□ -1.29
CDR1-201ENST00000370532 FKBP8Q14318 412 aa6.97□□□□□ -1.29
CDR1-201ENST00000370532 PTPRGP23470 1445 aa6.97□□□□□ -1.29
CDR1-201ENST00000370532 TEX14Q8IWB6 1497 aa6.97□□□□□ -1.29
CDR1-201ENST00000370532 UACAQ9BZF9 1416 aa6.96□□□□□ -1.29
CDR1-201ENST00000370532 DISP1Q96F81 1524 aa6.96□□□□□ -1.29
CDR1-201ENST00000370532 CFAP43Q8NDM7 1665 aa6.96□□□□□ -1.29
CDR1-201ENST00000370532 KDM6BO15054 1643 aa6.96□□□□□ -1.3
CDR1-201ENST00000370532 PPRC1Q5VV67 1664 aaKnown RBP6.95□□□□□ -1.3
CDR1-201ENST00000370532 PRXQ9BXM0 1461 aa6.95□□□□□ -1.3
CDR1-201ENST00000370532 ABCA8O94911 1581 aa6.94□□□□□ -1.3
CDR1-201ENST00000370532 PHLDB1Q86UU1 1377 aa6.94□□□□□ -1.3
CDR1-201ENST00000370532 RTN4Q9NQC3 1192 aaKnown RBP6.93□□□□□ -1.3
CDR1-201ENST00000370532 ZCCHC11Q5TAX3 1644 aaKnown RBP6.93□□□□□ -1.3
CDR1-201ENST00000370532 MAGI3Q5TCQ9 1506 aa6.93□□□□□ -1.3
CDR1-201ENST00000370532 EPRSP07814 1512 aaKnown RBP6.92□□□□□ -1.3
CDR1-201ENST00000370532 SAMD9Q5K651 1589 aa6.91□□□□□ -1.3
CDR1-201ENST00000370532 ASXL2Q76L83 1435 aa6.91□□□□□ -1.3
CDR1-201ENST00000370532 WDR7Q9Y4E6 1490 aa6.9□□□□□ -1.3
CDR1-201ENST00000370532 EFCAB5A4FU69 1503 aa6.89□□□□□ -1.31
CDR1-201ENST00000370532 FAM69CQ0P6D2 419 aa6.88□□□□□ -1.31
CDR1-201ENST00000370532 SPINK5Q9NQ38 1064 aaPredicted RBP6.88□□□□□ -1.31
CDR1-201ENST00000370532 KIF21BO75037 1637 aa6.88□□□□□ -1.31
CDR1-201ENST00000370532 ATXN8OSP0DMR3 200 aa6.88□□□□□ -1.31
CDR1-201ENST00000370532 ANP32EQ9BTT0 268 aa6.88□□□□□ -1.31
CDR1-201ENST00000370532 CFAP74Q9C0B2 1584 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms