RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 NCLP19338 710 aaKnown RBP11.43□□□□□ -0.58
LCA5-201ENST00000369846 BECN1Q14457 450 aa11.39□□□□□ -0.59
LCA5-201ENST00000369846 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.38□□□□□ -0.59
LCA5-201ENST00000369846 MRS2Q9HD23 443 aa11.37□□□□□ -0.59
LCA5-201ENST00000369846 PNNQ9H307 717 aaKnown RBP11.37□□□□□ -0.59
LCA5-201ENST00000369846 TSHZ2Q9NRE2 1034 aa11.37□□□□□ -0.59
LCA5-201ENST00000369846 SLC24A1O60721 1099 aa11.36□□□□□ -0.59
LCA5-201ENST00000369846 CECR2Q9BXF3 1484 aa11.35□□□□□ -0.59
LCA5-201ENST00000369846 HIRIP3Q9BW71 556 aaPredicted RBP11.34□□□□□ -0.59
LCA5-201ENST00000369846 GOLGA6L22H0YM25 854 aa11.34□□□□□ -0.59
LCA5-201ENST00000369846 A0A0U1RQG5 324 aaPredicted RBP11.34□□□□□ -0.59
LCA5-201ENST00000369846 TMC1Q8TDI8 760 aa11.33□□□□□ -0.6
LCA5-201ENST00000369846 SENP3-EIF4A1A0A087X0R7 540 aa11.33□□□□□ -0.6
LCA5-201ENST00000369846 HSP90AA2PQ14568 343 aaPredicted RBP11.32□□□□□ -0.6
LCA5-201ENST00000369846 B4GALNT3Q6L9W6 998 aa11.32□□□□□ -0.6
LCA5-201ENST00000369846 TIMELESSQ9UNS1 1208 aa11.3□□□□□ -0.6
LCA5-201ENST00000369846 PPP4R2Q9NY27 417 aa11.29□□□□□ -0.6
LCA5-201ENST00000369846 ANO8Q9HCE9 1232 aaPredicted RBP11.29□□□□□ -0.6
LCA5-201ENST00000369846 PLCB2Q00722 1185 aa11.28□□□□□ -0.6
LCA5-201ENST00000369846 TPRNQ4KMQ1 711 aa11.28□□□□□ -0.6
LCA5-201ENST00000369846 TNNT3P45378 269 aaPredicted RBP11.28□□□□□ -0.6
LCA5-201ENST00000369846 MSNP26038 577 aaKnown RBP11.26□□□□□ -0.61
LCA5-201ENST00000369846 PKNOX2Q96KN3 472 aa11.26□□□□□ -0.61
LCA5-201ENST00000369846 PODXL2Q9NZ53 605 aa11.26□□□□□ -0.61
LCA5-201ENST00000369846 L1TD1Q5T7N2 865 aaKnown RBP11.25□□□□□ -0.61
LCA5-201ENST00000369846 PABPN1Q86U42 306 aaKnown RBP eCLIP11.25□□□□□ -0.61
LCA5-201ENST00000369846 MROH2BQ7Z745 1585 aa11.25□□□□□ -0.61
LCA5-201ENST00000369846 ZBTB7CA1YPR0 619 aa11.25□□□□□ -0.61
LCA5-201ENST00000369846 CEP162Q5TB80 1403 aa11.24□□□□□ -0.61
LCA5-201ENST00000369846 TONSLQ96HA7 1378 aa11.24□□□□□ -0.61
LCA5-201ENST00000369846 ABCC8Q09428 1581 aa11.23□□□□□ -0.61
LCA5-201ENST00000369846 RGS3P49796 1198 aa11.22□□□□□ -0.61
LCA5-201ENST00000369846 WIZO95785 1651 aa11.22□□□□□ -0.61
LCA5-201ENST00000369846 SOGA1O94964 1423 aa11.22□□□□□ -0.61
LCA5-201ENST00000369846 CCDC88BA6NC98 1476 aa11.22□□□□□ -0.61
LCA5-201ENST00000369846 RSPH6AQ9H0K4 717 aa11.21□□□□□ -0.61
LCA5-201ENST00000369846 RUSC2Q8N2Y8 1516 aa11.19□□□□□ -0.62
LCA5-201ENST00000369846 GZF1Q9H116 711 aaPredicted RBP11.19□□□□□ -0.62
LCA5-201ENST00000369846 CHAF1AQ13111 956 aaPredicted RBP11.18□□□□□ -0.62
LCA5-201ENST00000369846 KCNH8Q96L42 1107 aa11.16□□□□□ -0.62
LCA5-201ENST00000369846 WDR43Q15061 677 aaKnown RBP eCLIP11.16□□□□□ -0.62
LCA5-201ENST00000369846 SPRYD3Q8NCJ5 442 aa11.14□□□□□ -0.63
LCA5-201ENST00000369846 WRNQ14191 1432 aaPredicted RBP eCLIP11.11□□□□□ -0.63
LCA5-201ENST00000369846 ZRSR1Q15695 479 aaKnown RBP11.1□□□□□ -0.63
LCA5-201ENST00000369846 SLKQ9H2G2 1235 aaPredicted RBP11.1□□□□□ -0.63
LCA5-201ENST00000369846 IPO9Q96P70 1041 aaKnown RBP11.09□□□□□ -0.63
LCA5-201ENST00000369846 HSP90AB1P08238 724 aaKnown RBP11.08□□□□□ -0.63
LCA5-201ENST00000369846 FBLN2P98095 1184 aa11.08□□□□□ -0.64
LCA5-201ENST00000369846 GOLGA6L3A6NEY3 463 aa11.07□□□□□ -0.64
LCA5-201ENST00000369846 MYH16Q9H6N6 1097 aa11.07□□□□□ -0.64
LCA5-201ENST00000369846 TNIKQ9UKE5 1360 aa11.07□□□□□ -0.64
LCA5-201ENST00000369846 KIAA2012Q0VF49 1180 aa11.05□□□□□ -0.64
LCA5-201ENST00000369846 P3H3Q8IVL6 736 aa11.04□□□□□ -0.64
LCA5-201ENST00000369846 GSE1Q14687 1217 aa11.03□□□□□ -0.64
LCA5-201ENST00000369846 NRDCO43847 1150 aa11.02□□□□□ -0.64
LCA5-201ENST00000369846 EIF4G2P78344 907 aaKnown RBP eCLIP11.02□□□□□ -0.65
LCA5-201ENST00000369846 FAM13BQ9NYF5 915 aa11.02□□□□□ -0.65
LCA5-201ENST00000369846 HSCBQ8IWL3 235 aa11.01□□□□□ -0.65
LCA5-201ENST00000369846 DRC7Q8IY82 874 aa11.01□□□□□ -0.65
LCA5-201ENST00000369846 EIF4G1Q04637 1599 aaKnown RBP11.01□□□□□ -0.65
LCA5-201ENST00000369846 AEBP2Q6ZN18 517 aaPredicted RBP11.01□□□□□ -0.65
LCA5-201ENST00000369846 IL27Q8NEV9 243 aa11□□□□□ -0.65
LCA5-201ENST00000369846 USP35Q9P2H5 1018 aa11□□□□□ -0.65
LCA5-201ENST00000369846 ARID3CA6NKF2 412 aa10.99□□□□□ -0.65
LCA5-201ENST00000369846 GOLGA6L6A8MZA4 724 aa10.98□□□□□ -0.65
LCA5-201ENST00000369846 ZNF771Q7L3S4 317 aaPredicted RBP10.98□□□□□ -0.65
LCA5-201ENST00000369846 APPP05067 770 aa10.97□□□□□ -0.65
LCA5-201ENST00000369846 TRHP20396 242 aaPredicted RBP10.97□□□□□ -0.65
LCA5-201ENST00000369846 PTMSP20962 102 aa10.96□□□□□ -0.66
LCA5-201ENST00000369846 FRAT1Q92837 279 aaPredicted RBP10.96□□□□□ -0.66
LCA5-201ENST00000369846 KDM2AQ9Y2K7 1162 aa10.95□□□□□ -0.66
LCA5-201ENST00000369846 BAZ1AQ9NRL2 1556 aaPredicted RBP10.95□□□□□ -0.66
LCA5-201ENST00000369846 SLC4A3P48751 1232 aa10.95□□□□□ -0.66
LCA5-201ENST00000369846 GBP4Q96PP9 640 aa10.95□□□□□ -0.66
LCA5-201ENST00000369846 CLIP1P30622 1438 aa10.94□□□□□ -0.66
LCA5-201ENST00000369846 GOLGA6L4A6NEF3 574 aa10.94□□□□□ -0.66
LCA5-201ENST00000369846 PLPPR3Q6T4P5 718 aa10.94□□□□□ -0.66
LCA5-201ENST00000369846 TCERG1O14776 1098 aaKnown RBP10.94□□□□□ -0.66
LCA5-201ENST00000369846 FTSJ3Q8IY81 847 aaKnown RBP10.93□□□□□ -0.66
LCA5-201ENST00000369846 GOLGA3Q08378 1498 aa10.93□□□□□ -0.66
LCA5-201ENST00000369846 ZNF777Q9ULD5 760 aaPredicted RBP10.93□□□□□ -0.66
LCA5-201ENST00000369846 TAOK2Q9UL54 1235 aa10.93□□□□□ -0.66
LCA5-201ENST00000369846 DHX57Q6P158 1386 aaKnown RBP10.93□□□□□ -0.66
LCA5-201ENST00000369846 KANK4Q5T7N3 995 aaPredicted RBP10.92□□□□□ -0.66
LCA5-201ENST00000369846 CHIC2Q9UKJ5 165 aa10.92□□□□□ -0.66
LCA5-201ENST00000369846 CASC1Q6TDU7 716 aa10.92□□□□□ -0.66
LCA5-201ENST00000369846 FANCIQ9NVI1 1328 aa10.92□□□□□ -0.66
LCA5-201ENST00000369846 NEUROD2Q15784 382 aa10.92□□□□□ -0.66
LCA5-201ENST00000369846 BRPF3Q9ULD4 1205 aa10.91□□□□□ -0.66
LCA5-201ENST00000369846 CALRP27797 417 aaKnown RBP10.9□□□□□ -0.66
LCA5-201ENST00000369846 NACADO15069 1562 aa10.9□□□□□ -0.66
LCA5-201ENST00000369846 SMARCA2P51531 1590 aa10.87□□□□□ -0.67
LCA5-201ENST00000369846 CALD1Q05682 793 aaKnown RBP10.87□□□□□ -0.67
LCA5-201ENST00000369846 FAM43AQ8N2R8 423 aa10.86□□□□□ -0.67
LCA5-201ENST00000369846 MAPK8IP2Q13387 824 aaPredicted RBP10.86□□□□□ -0.67
LCA5-201ENST00000369846 VPS8Q8N3P4 1428 aa10.86□□□□□ -0.67
LCA5-201ENST00000369846 RAPGEF2Q9Y4G8 1499 aa10.86□□□□□ -0.67
LCA5-201ENST00000369846 CCER2I3L3R5 266 aa10.85□□□□□ -0.67
LCA5-201ENST00000369846 GOLGA6L1Q8N7Z2 621 aa10.85□□□□□ -0.67
LCA5-201ENST00000369846 TULP1O00294 542 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms