RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 RANGAP1P46060 587 aaPredicted RBP27.52■■■□□ 2
UBE3D-203ENST00000369747 CTTNBP2Q8WZ74 1663 aa27.52■■■□□ 2
UBE3D-203ENST00000369747 NUP160Q12769 1436 aa27.49■■□□□ 1.99
UBE3D-203ENST00000369747 CEP162Q5TB80 1403 aa27.47■■□□□ 1.99
UBE3D-203ENST00000369747 KIAA0586Q9BVV6 1533 aa27.42■■□□□ 1.98
UBE3D-203ENST00000369747 PCGF6Q9BYE7 350 aa27.41■■□□□ 1.98
UBE3D-203ENST00000369747 IQGAP2Q13576 1575 aa27.4■■□□□ 1.98
UBE3D-203ENST00000369747 CLIP1P30622 1438 aa27.38■■□□□ 1.97
UBE3D-203ENST00000369747 ARHGAP35Q9NRY4 1499 aa27.29■■□□□ 1.96
UBE3D-203ENST00000369747 OSCARQ8IYS5 282 aa27.29■■□□□ 1.96
UBE3D-203ENST00000369747 CLASP1Q7Z460 1538 aa27.28■■□□□ 1.96
UBE3D-203ENST00000369747 JPH4Q96JJ6 628 aa27.28■■□□□ 1.96
UBE3D-203ENST00000369747 P3H3Q8IVL6 736 aa27.26■■□□□ 1.95
UBE3D-203ENST00000369747 UGGT2Q9NYU1 1516 aa27.26■■□□□ 1.95
UBE3D-203ENST00000369747 SAMD9Q5K651 1589 aa27.22■■□□□ 1.95
UBE3D-203ENST00000369747 ARAP1Q96P48 1450 aa27.21■■□□□ 1.95
UBE3D-203ENST00000369747 TRIM26Q12899 539 aaPredicted RBP27.21■■□□□ 1.95
UBE3D-203ENST00000369747 EFCAB5A4FU69 1503 aa27.21■■□□□ 1.95
UBE3D-203ENST00000369747 DISP1Q96F81 1524 aa27.19■■□□□ 1.94
UBE3D-203ENST00000369747 SHROOM2Q13796 1616 aa27.17■■□□□ 1.94
UBE3D-203ENST00000369747 FHOD3Q2V2M9 1422 aa27.17■■□□□ 1.94
UBE3D-203ENST00000369747 PRG4Q92954 1404 aaPredicted RBP27.15■■□□□ 1.94
UBE3D-203ENST00000369747 KIAA0556O60303 1618 aa27.13■■□□□ 1.93
UBE3D-203ENST00000369747 CARMIL2Q6F5E8 1435 aa27.09■■□□□ 1.93
UBE3D-203ENST00000369747 ERCC6L2Q5T890 1561 aa27.09■■□□□ 1.93
UBE3D-203ENST00000369747 TTBK1Q5TCY1 1321 aaPredicted RBP27.06■■□□□ 1.92
UBE3D-203ENST00000369747 VPS8Q8N3P4 1428 aa27.05■■□□□ 1.92
UBE3D-203ENST00000369747 HRCP23327 699 aa27.02■■□□□ 1.92
UBE3D-203ENST00000369747 FMN1Q68DA7 1419 aa26.97■■□□□ 1.91
UBE3D-203ENST00000369747 PCF11O94913 1555 aaKnown RBP26.91■■□□□ 1.9
UBE3D-203ENST00000369747 PTPRGP23470 1445 aa26.9■■□□□ 1.9
UBE3D-203ENST00000369747 ATP1B4Q9UN42 357 aaPredicted RBP26.88■■□□□ 1.89
UBE3D-203ENST00000369747 CASKIN1Q8WXD9 1431 aa26.86■■□□□ 1.89
UBE3D-203ENST00000369747 PLB1Q6P1J6 1458 aa26.86■■□□□ 1.89
UBE3D-203ENST00000369747 ARHGEF11O15085 1522 aa26.85■■□□□ 1.89
UBE3D-203ENST00000369747 FYCO1Q9BQS8 1478 aa26.83■■□□□ 1.89
UBE3D-203ENST00000369747 PPARGC1BQ86YN6 1023 aaKnown RBP26.83■■□□□ 1.89
UBE3D-203ENST00000369747 RAPGEF6Q8TEU7 1601 aa26.8■■□□□ 1.88
UBE3D-203ENST00000369747 ABCA8O94911 1581 aa26.78■■□□□ 1.88
UBE3D-203ENST00000369747 ARID3CA6NKF2 412 aa26.77■■□□□ 1.88
UBE3D-203ENST00000369747 LRRIQ1Q96JM4 1722 aa26.76■■□□□ 1.88
UBE3D-203ENST00000369747 RIMBP3CA6NJZ7 1639 aa26.76■■□□□ 1.87
UBE3D-203ENST00000369747 RIMBP3BA6NNM3 1639 aa26.76■■□□□ 1.87
UBE3D-203ENST00000369747 RIMBP3Q9UFD9 1639 aa26.76■■□□□ 1.87
UBE3D-203ENST00000369747 NUP153P49790 1475 aaKnown RBP26.75■■□□□ 1.87
UBE3D-203ENST00000369747 HECW1Q76N89 1606 aa26.74■■□□□ 1.87
UBE3D-203ENST00000369747 UACAQ9BZF9 1416 aa26.74■■□□□ 1.87
UBE3D-203ENST00000369747 APLP2Q06481 763 aa26.74■■□□□ 1.87
UBE3D-203ENST00000369747 EPRSP07814 1512 aaKnown RBP26.69■■□□□ 1.86
UBE3D-203ENST00000369747 CDK13Q14004 1512 aaKnown RBP26.68■■□□□ 1.86
UBE3D-203ENST00000369747 TIAM1Q13009 1591 aa26.67■■□□□ 1.86
UBE3D-203ENST00000369747 ABCC2Q92887 1545 aa26.67■■□□□ 1.86
UBE3D-203ENST00000369747 KANK4Q5T7N3 995 aaPredicted RBP26.66■■□□□ 1.86
UBE3D-203ENST00000369747 CFAP43Q8NDM7 1665 aa26.64■■□□□ 1.86
UBE3D-203ENST00000369747 CYB5RLQ6IPT4 315 aa26.64■■□□□ 1.86
UBE3D-203ENST00000369747 CCDC18Q5T9S5 1454 aa26.63■■□□□ 1.85
UBE3D-203ENST00000369747 MAP3K1Q13233 1512 aa26.63■■□□□ 1.85
UBE3D-203ENST00000369747 ADCY10Q96PN6 1610 aa26.62■■□□□ 1.85
UBE3D-203ENST00000369747 UHRF1BP1LA0JNW5 1464 aa26.61■■□□□ 1.85
UBE3D-203ENST00000369747 ATP10BO94823 1461 aa26.61■■□□□ 1.85
UBE3D-203ENST00000369747 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.61■■□□□ 1.85
UBE3D-203ENST00000369747 HNRNPUL2Q1KMD3 747 aaKnown RBP26.61■■□□□ 1.85
UBE3D-203ENST00000369747 LRRC9Q6ZRR7 1453 aa26.56■■□□□ 1.84
UBE3D-203ENST00000369747 MAGI3Q5TCQ9 1506 aa26.55■■□□□ 1.84
UBE3D-203ENST00000369747 KDM5BQ9UGL1 1544 aa26.53■■□□□ 1.84
UBE3D-203ENST00000369747 ZCCHC11Q5TAX3 1644 aaKnown RBP26.51■■□□□ 1.83
UBE3D-203ENST00000369747 MTUS2Q5JR59 1369 aa26.51■■□□□ 1.83
UBE3D-203ENST00000369747 DNAJC5Q9H3Z4 198 aa26.5■■□□□ 1.83
UBE3D-203ENST00000369747 CDK11AQ9UQ88 783 aaPredicted RBP26.47■■□□□ 1.83
UBE3D-203ENST00000369747 PLEKHD1A6NEE1 506 aa26.43■■□□□ 1.82
UBE3D-203ENST00000369747 EHBP1L1Q8N3D4 1523 aa26.43■■□□□ 1.82
UBE3D-203ENST00000369747 TROQ12816 1431 aaPredicted RBP26.41■■□□□ 1.82
UBE3D-203ENST00000369747 NPM1P06748 294 aaKnown RBP eCLIP26.4■■□□□ 1.82
UBE3D-203ENST00000369747 NCOA2Q15596 1464 aa26.35■■□□□ 1.81
UBE3D-203ENST00000369747 SUPT6HQ7KZ85 1726 aaKnown RBP26.35■■□□□ 1.81
UBE3D-203ENST00000369747 KIF14Q15058 1648 aa26.34■■□□□ 1.81
UBE3D-203ENST00000369747 ASXL2Q76L83 1435 aa26.33■■□□□ 1.81
UBE3D-203ENST00000369747 ZEB1P37275 1124 aaPredicted RBP26.33■■□□□ 1.81
UBE3D-203ENST00000369747 PHLDB1Q86UU1 1377 aa26.32■■□□□ 1.8
UBE3D-203ENST00000369747 KCNH8Q96L42 1107 aa26.31■■□□□ 1.8
UBE3D-203ENST00000369747 WDR7Q9Y4E6 1490 aa26.3■■□□□ 1.8
UBE3D-203ENST00000369747 MAPKBP1O60336 1514 aa26.23■■□□□ 1.79
UBE3D-203ENST00000369747 ABCC10Q5T3U5 1492 aa26.22■■□□□ 1.79
UBE3D-203ENST00000369747 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.2■■□□□ 1.79
UBE3D-203ENST00000369747 TTC37Q6PGP7 1564 aa26.19■■□□□ 1.78
UBE3D-203ENST00000369747 CCNB3Q8WWL7 1395 aa26.19■■□□□ 1.78
UBE3D-203ENST00000369747 MYOM3Q5VTT5 1437 aa26.19■■□□□ 1.78
UBE3D-203ENST00000369747 GPATCH8Q9UKJ3 1502 aaKnown RBP26.15■■□□□ 1.78
UBE3D-203ENST00000369747 FGD6Q6ZV73 1430 aa26.14■■□□□ 1.78
UBE3D-203ENST00000369747 RRBP1Q9P2E9 1410 aaKnown RBP26.14■■□□□ 1.78
UBE3D-203ENST00000369747 CDC42BPAQ5VT25 1732 aa26.13■■□□□ 1.77
UBE3D-203ENST00000369747 ABCA9Q8IUA7 1624 aa26.09■■□□□ 1.77
UBE3D-203ENST00000369747 ITSN2Q9NZM3 1697 aa26.09■■□□□ 1.77
UBE3D-203ENST00000369747 CFDP1Q9UEE9 299 aaPredicted RBP26.08■■□□□ 1.77
UBE3D-203ENST00000369747 CDC42BPBQ9Y5S2 1711 aa26.06■■□□□ 1.76
UBE3D-203ENST00000369747 FAM50AQ14320 339 aaKnown RBP26.06■■□□□ 1.76
UBE3D-203ENST00000369747 MYO5CQ9NQX4 1742 aa26.06■■□□□ 1.76
UBE3D-203ENST00000369747 MIA2Q96PC5 1412 aa26.06■■□□□ 1.76
UBE3D-203ENST00000369747 PREX2Q70Z35 1606 aa26.06■■□□□ 1.76
UBE3D-203ENST00000369747 CCER1Q8TC90 406 aaPredicted RBP26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms