RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 ILDR1Q86SU0 546 aaPredicted RBP8.52□□□□□ -1.05
UBE3D-202ENST00000369746 KIAA0586Q9BVV6 1533 aa8.51□□□□□ -1.05
UBE3D-202ENST00000369746 KDM6BO15054 1643 aa8.51□□□□□ -1.05
UBE3D-202ENST00000369746 SNAPC4Q5SXM2 1469 aa8.51□□□□□ -1.05
UBE3D-202ENST00000369746 FBXO41Q8TF61 875 aa8.49□□□□□ -1.05
UBE3D-202ENST00000369746 ARXQ96QS3 562 aa8.49□□□□□ -1.05
UBE3D-202ENST00000369746 ABCA10Q8WWZ4 1543 aa8.48□□□□□ -1.05
UBE3D-202ENST00000369746 CEP170Q5SW79 1584 aa8.48□□□□□ -1.05
UBE3D-202ENST00000369746 ADAMTS12P58397 1594 aa8.45□□□□□ -1.06
UBE3D-202ENST00000369746 ERICH3Q5RHP9 1530 aa8.45□□□□□ -1.06
UBE3D-202ENST00000369746 EIF5BO60841 1220 aaKnown RBP8.45□□□□□ -1.06
UBE3D-202ENST00000369746 TULP1O00294 542 aaPredicted RBP8.44□□□□□ -1.06
UBE3D-202ENST00000369746 KLHL34Q8N239 644 aa8.44□□□□□ -1.06
UBE3D-202ENST00000369746 GRIN2AQ12879 1464 aa8.43□□□□□ -1.06
UBE3D-202ENST00000369746 SOGA1O94964 1423 aa8.43□□□□□ -1.06
UBE3D-202ENST00000369746 HECW2Q9P2P5 1572 aa8.43□□□□□ -1.06
UBE3D-202ENST00000369746 IQSEC2Q5JU85 1478 aa8.42□□□□□ -1.06
UBE3D-202ENST00000369746 UHRF1BP1LA0JNW5 1464 aa8.42□□□□□ -1.06
UBE3D-202ENST00000369746 AQRO60306 1485 aaKnown RBP eCLIP8.42□□□□□ -1.06
UBE3D-202ENST00000369746 TEX14Q8IWB6 1497 aa8.41□□□□□ -1.06
UBE3D-202ENST00000369746 CSRNP3Q8WYN3 585 aa8.4□□□□□ -1.06
UBE3D-202ENST00000369746 FHAD1B1AJZ9 1412 aa8.39□□□□□ -1.07
UBE3D-202ENST00000369746 CCDC88BA6NC98 1476 aa8.39□□□□□ -1.07
UBE3D-202ENST00000369746 PLB1Q6P1J6 1458 aa8.38□□□□□ -1.07
UBE3D-202ENST00000369746 KDM4FA0A1W2PPD8 638 aa8.37□□□□□ -1.07
UBE3D-202ENST00000369746 PHLDB1Q86UU1 1377 aa8.37□□□□□ -1.07
UBE3D-202ENST00000369746 ADGRL1O94910 1474 aa8.36□□□□□ -1.07
UBE3D-202ENST00000369746 MAP3K4Q9Y6R4 1608 aa8.36□□□□□ -1.07
UBE3D-202ENST00000369746 PPRC1Q5VV67 1664 aaKnown RBP8.36□□□□□ -1.07
UBE3D-202ENST00000369746 FGD5Q6ZNL6 1462 aa8.36□□□□□ -1.07
UBE3D-202ENST00000369746 RANGAP1P46060 587 aaPredicted RBP8.35□□□□□ -1.07
UBE3D-202ENST00000369746 PLEKHG5O94827 1062 aa8.34□□□□□ -1.07
UBE3D-202ENST00000369746 CHMP7Q8WUX9 453 aaPredicted RBP8.34□□□□□ -1.07
UBE3D-202ENST00000369746 RUSC2Q8N2Y8 1516 aa8.33□□□□□ -1.08
UBE3D-202ENST00000369746 ADCY10Q96PN6 1610 aa8.32□□□□□ -1.08
UBE3D-202ENST00000369746 BIVM-ERCC5R4GMW8 1640 aa8.32□□□□□ -1.08
UBE3D-202ENST00000369746 SOCS7O14512 581 aa8.3□□□□□ -1.08
UBE3D-202ENST00000369746 TAOK2Q9UL54 1235 aa8.3□□□□□ -1.08
UBE3D-202ENST00000369746 MAGI3Q5TCQ9 1506 aa8.3□□□□□ -1.08
UBE3D-202ENST00000369746 CUX1P39880 1505 aa8.29□□□□□ -1.08
UBE3D-202ENST00000369746 CFAP43Q8NDM7 1665 aa8.28□□□□□ -1.08
UBE3D-202ENST00000369746 ADAMTSL3P82987 1691 aa8.28□□□□□ -1.08
UBE3D-202ENST00000369746 ABCC2Q92887 1545 aa8.27□□□□□ -1.09
UBE3D-202ENST00000369746 RAD54L2Q9Y4B4 1467 aa8.26□□□□□ -1.09
UBE3D-202ENST00000369746 LMTK3Q96Q04 1460 aa8.25□□□□□ -1.09
UBE3D-202ENST00000369746 HOMEZQ8IX15 550 aa8.25□□□□□ -1.09
UBE3D-202ENST00000369746 PODXL2Q9NZ53 605 aa8.25□□□□□ -1.09
UBE3D-202ENST00000369746 CUL7Q14999 1698 aa8.25□□□□□ -1.09
UBE3D-202ENST00000369746 NPM1P06748 294 aaKnown RBP eCLIP8.24□□□□□ -1.09
UBE3D-202ENST00000369746 ARAP3Q8WWN8 1544 aa8.24□□□□□ -1.09
UBE3D-202ENST00000369746 KDM5BQ9UGL1 1544 aa8.22□□□□□ -1.09
UBE3D-202ENST00000369746 PRG4Q92954 1404 aaPredicted RBP8.22□□□□□ -1.09
UBE3D-202ENST00000369746 TDRD9Q8NDG6 1382 aaKnown RBP8.22□□□□□ -1.09
UBE3D-202ENST00000369746 TPRNQ4KMQ1 711 aa8.22□□□□□ -1.09
UBE3D-202ENST00000369746 PCF11O94913 1555 aaKnown RBP8.21□□□□□ -1.1
UBE3D-202ENST00000369746 WRNQ14191 1432 aaPredicted RBP eCLIP8.21□□□□□ -1.1
UBE3D-202ENST00000369746 SPATA31D1Q6ZQQ2 1576 aa8.19□□□□□ -1.1
UBE3D-202ENST00000369746 EPRSP07814 1512 aaKnown RBP8.18□□□□□ -1.1
UBE3D-202ENST00000369746 FAM69CQ0P6D2 419 aa8.17□□□□□ -1.1
UBE3D-202ENST00000369746 BCORL1Q5H9F3 1711 aa8.15□□□□□ -1.1
UBE3D-202ENST00000369746 CARMIL2Q6F5E8 1435 aa8.14□□□□□ -1.11
UBE3D-202ENST00000369746 FBLN2P98095 1184 aa8.14□□□□□ -1.11
UBE3D-202ENST00000369746 BCL11AQ9H165 835 aa8.14□□□□□ -1.11
UBE3D-202ENST00000369746 TNIKQ9UKE5 1360 aa8.13□□□□□ -1.11
UBE3D-202ENST00000369746 PTPRTO14522 1441 aa8.13□□□□□ -1.11
UBE3D-202ENST00000369746 CFAP74Q9C0B2 1584 aa8.12□□□□□ -1.11
UBE3D-202ENST00000369746 NEO1Q92859 1461 aa8.12□□□□□ -1.11
UBE3D-202ENST00000369746 UGGT2Q9NYU1 1516 aa8.11□□□□□ -1.11
UBE3D-202ENST00000369746 ASXL2Q76L83 1435 aa8.11□□□□□ -1.11
UBE3D-202ENST00000369746 JPH4Q96JJ6 628 aa8.11□□□□□ -1.11
UBE3D-202ENST00000369746 PTPRMP28827 1452 aa8.11□□□□□ -1.11
UBE3D-202ENST00000369746 MAGI2Q86UL8 1455 aa8.1□□□□□ -1.11
UBE3D-202ENST00000369746 ZMYM4Q5VZL5 1548 aa8.09□□□□□ -1.11
UBE3D-202ENST00000369746 TTC37Q6PGP7 1564 aa8.09□□□□□ -1.11
UBE3D-202ENST00000369746 UACAQ9BZF9 1416 aa8.09□□□□□ -1.11
UBE3D-202ENST00000369746 WDR7Q9Y4E6 1490 aa8.08□□□□□ -1.12
UBE3D-202ENST00000369746 BCANQ96GW7 911 aa8.07□□□□□ -1.12
UBE3D-202ENST00000369746 DMRT2Q9Y5R5 561 aa8.07□□□□□ -1.12
UBE3D-202ENST00000369746 PREX1Q8TCU6 1659 aa8.07□□□□□ -1.12
UBE3D-202ENST00000369746 ZCCHC11Q5TAX3 1644 aaKnown RBP8.07□□□□□ -1.12
UBE3D-202ENST00000369746 ARHGEF40Q8TER5 1519 aa8.06□□□□□ -1.12
UBE3D-202ENST00000369746 TSPOAP1O95153 1857 aa8.06□□□□□ -1.12
UBE3D-202ENST00000369746 PHF23Q9BUL5 403 aaPredicted RBP8.06□□□□□ -1.12
UBE3D-202ENST00000369746 REREQ9P2R6 1566 aa8.06□□□□□ -1.12
UBE3D-202ENST00000369746 ABCA9Q8IUA7 1624 aa8.06□□□□□ -1.12
UBE3D-202ENST00000369746 PTPRGP23470 1445 aa8.05□□□□□ -1.12
UBE3D-202ENST00000369746 GTF3C3Q9Y5Q9 886 aa8.05□□□□□ -1.12
UBE3D-202ENST00000369746 POGZQ7Z3K3 1410 aa8.04□□□□□ -1.12
UBE3D-202ENST00000369746 NPM2Q86SE8 214 aaKnown RBP8.04□□□□□ -1.12
UBE3D-202ENST00000369746 COL17A1Q9UMD9 1497 aaPredicted RBP8.04□□□□□ -1.12
UBE3D-202ENST00000369746 IQGAP2Q13576 1575 aa8.03□□□□□ -1.12
UBE3D-202ENST00000369746 CERKQ8TCT0 537 aa8.02□□□□□ -1.12
UBE3D-202ENST00000369746 KIF21BO75037 1637 aa8.01□□□□□ -1.13
UBE3D-202ENST00000369746 EFCAB5A4FU69 1503 aa8.01□□□□□ -1.13
UBE3D-202ENST00000369746 HRCP23327 699 aa8.01□□□□□ -1.13
UBE3D-202ENST00000369746 FANCAO15360 1455 aa8□□□□□ -1.13
UBE3D-202ENST00000369746 GOLGA3Q08378 1498 aa8□□□□□ -1.13
UBE3D-202ENST00000369746 ABCA8O94911 1581 aa8□□□□□ -1.13
UBE3D-202ENST00000369746 FAM9AQ8IZU1 332 aaPredicted RBP8□□□□□ -1.13
UBE3D-202ENST00000369746 FHOD3Q2V2M9 1422 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms