RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 CHD1O14646 1710 aa17.59■□□□□ 0.41
BRCC3-204ENST00000369462 NUP160Q12769 1436 aa17.56■□□□□ 0.4
BRCC3-204ENST00000369462 CEP170Q5SW79 1584 aa17.56■□□□□ 0.4
BRCC3-204ENST00000369462 CEP162Q5TB80 1403 aa17.55■□□□□ 0.4
BRCC3-204ENST00000369462 CTTNBP2Q8WZ74 1663 aa17.54■□□□□ 0.4
BRCC3-204ENST00000369462 KIAA0586Q9BVV6 1533 aa17.54■□□□□ 0.4
BRCC3-204ENST00000369462 CLIP1P30622 1438 aa17.51■□□□□ 0.39
BRCC3-204ENST00000369462 IQGAP2Q13576 1575 aa17.5■□□□□ 0.39
BRCC3-204ENST00000369462 OSCARQ8IYS5 282 aa17.48■□□□□ 0.39
BRCC3-204ENST00000369462 JPH4Q96JJ6 628 aa17.47■□□□□ 0.39
BRCC3-204ENST00000369462 P3H3Q8IVL6 736 aa17.45■□□□□ 0.38
BRCC3-204ENST00000369462 ARHGAP35Q9NRY4 1499 aa17.43■□□□□ 0.38
BRCC3-204ENST00000369462 UGGT2Q9NYU1 1516 aa17.41■□□□□ 0.38
BRCC3-204ENST00000369462 CLASP1Q7Z460 1538 aa17.4■□□□□ 0.38
BRCC3-204ENST00000369462 EFCAB5A4FU69 1503 aa17.38■□□□□ 0.37
BRCC3-204ENST00000369462 ARAP1Q96P48 1450 aa17.37■□□□□ 0.37
BRCC3-204ENST00000369462 FHOD3Q2V2M9 1422 aa17.36■□□□□ 0.37
BRCC3-204ENST00000369462 PRG4Q92954 1404 aaPredicted RBP17.36■□□□□ 0.37
BRCC3-204ENST00000369462 SAMD9Q5K651 1589 aa17.36■□□□□ 0.37
BRCC3-204ENST00000369462 DISP1Q96F81 1524 aa17.36■□□□□ 0.37
BRCC3-204ENST00000369462 CARMIL2Q6F5E8 1435 aa17.34■□□□□ 0.37
BRCC3-204ENST00000369462 TTBK1Q5TCY1 1321 aaPredicted RBP17.33■□□□□ 0.37
BRCC3-204ENST00000369462 SHROOM2Q13796 1616 aa17.33■□□□□ 0.36
BRCC3-204ENST00000369462 KIAA0556O60303 1618 aa17.32■□□□□ 0.36
BRCC3-204ENST00000369462 VPS8Q8N3P4 1428 aa17.29■□□□□ 0.36
BRCC3-204ENST00000369462 ERCC6L2Q5T890 1561 aa17.28■□□□□ 0.36
BRCC3-204ENST00000369462 FMN1Q68DA7 1419 aa17.26■□□□□ 0.35
BRCC3-204ENST00000369462 ATP1B4Q9UN42 357 aaPredicted RBP17.23■□□□□ 0.35
BRCC3-204ENST00000369462 PTPRGP23470 1445 aa17.22■□□□□ 0.35
BRCC3-204ENST00000369462 CASKIN1Q8WXD9 1431 aa17.17■□□□□ 0.34
BRCC3-204ENST00000369462 PCF11O94913 1555 aaKnown RBP17.16■□□□□ 0.34
BRCC3-204ENST00000369462 PLB1Q6P1J6 1458 aa17.16■□□□□ 0.34
BRCC3-204ENST00000369462 APLP2Q06481 763 aa17.16■□□□□ 0.34
BRCC3-204ENST00000369462 ARHGEF11O15085 1522 aa17.15■□□□□ 0.34
BRCC3-204ENST00000369462 FYCO1Q9BQS8 1478 aa17.14■□□□□ 0.33
BRCC3-204ENST00000369462 ARID3CA6NKF2 412 aa17.13■□□□□ 0.33
BRCC3-204ENST00000369462 PPARGC1BQ86YN6 1023 aaKnown RBP17.11■□□□□ 0.33
BRCC3-204ENST00000369462 RAPGEF6Q8TEU7 1601 aa17.1■□□□□ 0.33
BRCC3-204ENST00000369462 UACAQ9BZF9 1416 aa17.1■□□□□ 0.33
BRCC3-204ENST00000369462 ABCA8O94911 1581 aa17.09■□□□□ 0.33
BRCC3-204ENST00000369462 NUP153P49790 1475 aaKnown RBP17.08■□□□□ 0.32
BRCC3-204ENST00000369462 HECW1Q76N89 1606 aa17.08■□□□□ 0.32
BRCC3-204ENST00000369462 RIMBP3CA6NJZ7 1639 aa17.08■□□□□ 0.32
BRCC3-204ENST00000369462 RIMBP3BA6NNM3 1639 aa17.08■□□□□ 0.32
BRCC3-204ENST00000369462 RIMBP3Q9UFD9 1639 aa17.08■□□□□ 0.32
BRCC3-204ENST00000369462 CYB5RLQ6IPT4 315 aa17.06■□□□□ 0.32
BRCC3-204ENST00000369462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.06■□□□□ 0.32
BRCC3-204ENST00000369462 HNRNPUL2Q1KMD3 747 aaKnown RBP17.06■□□□□ 0.32
BRCC3-204ENST00000369462 EPRSP07814 1512 aaKnown RBP17.05■□□□□ 0.32
BRCC3-204ENST00000369462 KANK4Q5T7N3 995 aaPredicted RBP17.04■□□□□ 0.32
BRCC3-204ENST00000369462 CDK13Q14004 1512 aaKnown RBP17.03■□□□□ 0.32
BRCC3-204ENST00000369462 ABCC2Q92887 1545 aa17.03■□□□□ 0.32
BRCC3-204ENST00000369462 TIAM1Q13009 1591 aa17.03■□□□□ 0.32
BRCC3-204ENST00000369462 LRRIQ1Q96JM4 1722 aa17.02■□□□□ 0.32
BRCC3-204ENST00000369462 CCDC18Q5T9S5 1454 aa17.02■□□□□ 0.32
BRCC3-204ENST00000369462 MAP3K1Q13233 1512 aa17.01■□□□□ 0.31
BRCC3-204ENST00000369462 UHRF1BP1LA0JNW5 1464 aa17.01■□□□□ 0.31
BRCC3-204ENST00000369462 ATP10BO94823 1461 aa17■□□□□ 0.31
BRCC3-204ENST00000369462 ADCY10Q96PN6 1610 aa16.98■□□□□ 0.31
BRCC3-204ENST00000369462 CDK11AQ9UQ88 783 aaPredicted RBP16.98■□□□□ 0.31
BRCC3-204ENST00000369462 CFAP43Q8NDM7 1665 aa16.97■□□□□ 0.31
BRCC3-204ENST00000369462 LRRC9Q6ZRR7 1453 aa16.97■□□□□ 0.31
BRCC3-204ENST00000369462 MTUS2Q5JR59 1369 aa16.97■□□□□ 0.31
BRCC3-204ENST00000369462 DNAJC5Q9H3Z4 198 aa16.97■□□□□ 0.31
BRCC3-204ENST00000369462 KDM5BQ9UGL1 1544 aa16.95■□□□□ 0.3
BRCC3-204ENST00000369462 PLEKHD1A6NEE1 506 aa16.94■□□□□ 0.3
BRCC3-204ENST00000369462 NPM1P06748 294 aaKnown RBP eCLIP16.94■□□□□ 0.3
BRCC3-204ENST00000369462 MAGI3Q5TCQ9 1506 aa16.93■□□□□ 0.3
BRCC3-204ENST00000369462 ZCCHC11Q5TAX3 1644 aaKnown RBP16.91■□□□□ 0.3
BRCC3-204ENST00000369462 TROQ12816 1431 aaPredicted RBP16.88■□□□□ 0.29
BRCC3-204ENST00000369462 EHBP1L1Q8N3D4 1523 aa16.88■□□□□ 0.29
BRCC3-204ENST00000369462 KCNH8Q96L42 1107 aa16.86■□□□□ 0.29
BRCC3-204ENST00000369462 ASXL2Q76L83 1435 aa16.83■□□□□ 0.28
BRCC3-204ENST00000369462 NCOA2Q15596 1464 aa16.83■□□□□ 0.28
BRCC3-204ENST00000369462 SUPT6HQ7KZ85 1726 aaKnown RBP16.82■□□□□ 0.28
BRCC3-204ENST00000369462 PHLDB1Q86UU1 1377 aa16.82■□□□□ 0.28
BRCC3-204ENST00000369462 WDR7Q9Y4E6 1490 aa16.81■□□□□ 0.28
BRCC3-204ENST00000369462 KIF14Q15058 1648 aa16.8■□□□□ 0.28
BRCC3-204ENST00000369462 TRIM26Q12899 539 aaPredicted RBP16.77■□□□□ 0.28
BRCC3-204ENST00000369462 CCNB3Q8WWL7 1395 aa16.77■□□□□ 0.27
BRCC3-204ENST00000369462 MAPKBP1O60336 1514 aa16.75■□□□□ 0.27
BRCC3-204ENST00000369462 MYOM3Q5VTT5 1437 aa16.74■□□□□ 0.27
BRCC3-204ENST00000369462 ABCC10Q5T3U5 1492 aa16.74■□□□□ 0.27
BRCC3-204ENST00000369462 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.73■□□□□ 0.27
BRCC3-204ENST00000369462 GPATCH8Q9UKJ3 1502 aaKnown RBP16.71■□□□□ 0.27
BRCC3-204ENST00000369462 CFDP1Q9UEE9 299 aaPredicted RBP16.71■□□□□ 0.27
BRCC3-204ENST00000369462 FGD6Q6ZV73 1430 aa16.71■□□□□ 0.26
BRCC3-204ENST00000369462 TTC37Q6PGP7 1564 aa16.7■□□□□ 0.26
BRCC3-204ENST00000369462 PCGF6Q9BYE7 350 aa16.7■□□□□ 0.26
BRCC3-204ENST00000369462 RRBP1Q9P2E9 1410 aaKnown RBP16.7■□□□□ 0.26
BRCC3-204ENST00000369462 FAM50AQ14320 339 aaKnown RBP16.69■□□□□ 0.26
BRCC3-204ENST00000369462 ZNF777Q9ULD5 760 aaPredicted RBP16.68■□□□□ 0.26
BRCC3-204ENST00000369462 MIA2Q96PC5 1412 aa16.67■□□□□ 0.26
BRCC3-204ENST00000369462 FAM69CQ0P6D2 419 aa16.66■□□□□ 0.26
BRCC3-204ENST00000369462 CDC42BPAQ5VT25 1732 aa16.66■□□□□ 0.26
BRCC3-204ENST00000369462 ZNF644Q9H582 1327 aaPredicted RBP16.66■□□□□ 0.26
BRCC3-204ENST00000369462 ABCA9Q8IUA7 1624 aa16.65■□□□□ 0.26
BRCC3-204ENST00000369462 PLCH2O75038 1416 aa16.65■□□□□ 0.26
BRCC3-204ENST00000369462 ITSN2Q9NZM3 1697 aa16.64■□□□□ 0.25
BRCC3-204ENST00000369462 ITGAEP38570 1179 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms