RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 MAGI1Q96QZ7 1491 aaPredicted RBP26.44■■□□□ 1.82
PHGDH-202ENST00000369409 EFCAB5A4FU69 1503 aa26.36■■□□□ 1.81
PHGDH-202ENST00000369409 GRIN2AQ12879 1464 aa26.35■■□□□ 1.81
PHGDH-202ENST00000369409 SYNJ2O15056 1496 aa26.34■■□□□ 1.81
PHGDH-202ENST00000369409 PPARGC1BQ86YN6 1023 aaKnown RBP26.32■■□□□ 1.8
PHGDH-202ENST00000369409 IQGAP2Q13576 1575 aa26.31■■□□□ 1.8
PHGDH-202ENST00000369409 SAMD9Q5K651 1589 aa26.29■■□□□ 1.8
PHGDH-202ENST00000369409 PCGF6Q9BYE7 350 aa26.25■■□□□ 1.79
PHGDH-202ENST00000369409 TRIM26Q12899 539 aaPredicted RBP26.23■■□□□ 1.79
PHGDH-202ENST00000369409 CEP170Q5SW79 1584 aa26.23■■□□□ 1.79
PHGDH-202ENST00000369409 FHOD3Q2V2M9 1422 aa26.23■■□□□ 1.79
PHGDH-202ENST00000369409 CHMP7Q8WUX9 453 aaPredicted RBP26.21■■□□□ 1.79
PHGDH-202ENST00000369409 P3H3Q8IVL6 736 aa26.19■■□□□ 1.78
PHGDH-202ENST00000369409 KIAA0586Q9BVV6 1533 aa26.19■■□□□ 1.78
PHGDH-202ENST00000369409 CHD1O14646 1710 aa26.19■■□□□ 1.78
PHGDH-202ENST00000369409 FBLN2P98095 1184 aa26.18■■□□□ 1.78
PHGDH-202ENST00000369409 PCF11O94913 1555 aaKnown RBP26.17■■□□□ 1.78
PHGDH-202ENST00000369409 TTBK1Q5TCY1 1321 aaPredicted RBP26.15■■□□□ 1.78
PHGDH-202ENST00000369409 UGGT2Q9NYU1 1516 aa26.15■■□□□ 1.78
PHGDH-202ENST00000369409 NUP160Q12769 1436 aa26.14■■□□□ 1.77
PHGDH-202ENST00000369409 APLP2Q06481 763 aa26.13■■□□□ 1.77
PHGDH-202ENST00000369409 FMN1Q68DA7 1419 aa26.07■■□□□ 1.76
PHGDH-202ENST00000369409 KIAA0556O60303 1618 aa26.06■■□□□ 1.76
PHGDH-202ENST00000369409 FYCO1Q9BQS8 1478 aa26.06■■□□□ 1.76
PHGDH-202ENST00000369409 CFAP43Q8NDM7 1665 aa26.05■■□□□ 1.76
PHGDH-202ENST00000369409 TIAM1Q13009 1591 aa26.03■■□□□ 1.76
PHGDH-202ENST00000369409 CASKIN1Q8WXD9 1431 aa26.02■■□□□ 1.76
PHGDH-202ENST00000369409 DISP1Q96F81 1524 aa26.02■■□□□ 1.76
PHGDH-202ENST00000369409 MAP3K1Q13233 1512 aa25.99■■□□□ 1.75
PHGDH-202ENST00000369409 LRRIQ1Q96JM4 1722 aa25.96■■□□□ 1.75
PHGDH-202ENST00000369409 KANK4Q5T7N3 995 aaPredicted RBP25.93■■□□□ 1.74
PHGDH-202ENST00000369409 ATP1B4Q9UN42 357 aaPredicted RBP25.91■■□□□ 1.74
PHGDH-202ENST00000369409 HECW1Q76N89 1606 aa25.89■■□□□ 1.73
PHGDH-202ENST00000369409 JPH4Q96JJ6 628 aa25.87■■□□□ 1.73
PHGDH-202ENST00000369409 LRRC9Q6ZRR7 1453 aa25.86■■□□□ 1.73
PHGDH-202ENST00000369409 CARMIL2Q6F5E8 1435 aa25.85■■□□□ 1.73
PHGDH-202ENST00000369409 SHROOM2Q13796 1616 aa25.84■■□□□ 1.73
PHGDH-202ENST00000369409 RAPGEF6Q8TEU7 1601 aa25.8■■□□□ 1.72
PHGDH-202ENST00000369409 CLASP1Q7Z460 1538 aa25.8■■□□□ 1.72
PHGDH-202ENST00000369409 CCDC18Q5T9S5 1454 aa25.78■■□□□ 1.72
PHGDH-202ENST00000369409 PRG4Q92954 1404 aaPredicted RBP25.77■■□□□ 1.72
PHGDH-202ENST00000369409 EPRSP07814 1512 aaKnown RBP25.73■■□□□ 1.71
PHGDH-202ENST00000369409 CDK13Q14004 1512 aaKnown RBP25.72■■□□□ 1.71
PHGDH-202ENST00000369409 NUP153P49790 1475 aaKnown RBP25.69■■□□□ 1.7
PHGDH-202ENST00000369409 EHBP1L1Q8N3D4 1523 aa25.69■■□□□ 1.7
PHGDH-202ENST00000369409 PLB1Q6P1J6 1458 aa25.69■■□□□ 1.7
PHGDH-202ENST00000369409 MTUS2Q5JR59 1369 aa25.67■■□□□ 1.7
PHGDH-202ENST00000369409 MAGI3Q5TCQ9 1506 aa25.67■■□□□ 1.7
PHGDH-202ENST00000369409 ERCC6L2Q5T890 1561 aa25.67■■□□□ 1.7
PHGDH-202ENST00000369409 RRBP1Q9P2E9 1410 aaKnown RBP25.66■■□□□ 1.7
PHGDH-202ENST00000369409 ABCA8O94911 1581 aa25.65■■□□□ 1.7
PHGDH-202ENST00000369409 SUPT6HQ7KZ85 1726 aaKnown RBP25.64■■□□□ 1.7
PHGDH-202ENST00000369409 PHLDB1Q86UU1 1377 aa25.62■■□□□ 1.69
PHGDH-202ENST00000369409 ARID3CA6NKF2 412 aa25.62■■□□□ 1.69
PHGDH-202ENST00000369409 PTPRGP23470 1445 aa25.58■■□□□ 1.69
PHGDH-202ENST00000369409 CCNB3Q8WWL7 1395 aa25.57■■□□□ 1.68
PHGDH-202ENST00000369409 NCOA2Q15596 1464 aa25.56■■□□□ 1.68
PHGDH-202ENST00000369409 ARHGEF11O15085 1522 aa25.52■■□□□ 1.68
PHGDH-202ENST00000369409 HNRNPUL2Q1KMD3 747 aaKnown RBP25.51■■□□□ 1.67
PHGDH-202ENST00000369409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.47■■□□□ 1.67
PHGDH-202ENST00000369409 UACAQ9BZF9 1416 aa25.45■■□□□ 1.66
PHGDH-202ENST00000369409 HRCP23327 699 aa25.45■■□□□ 1.66
PHGDH-202ENST00000369409 MYOM3Q5VTT5 1437 aa25.44■■□□□ 1.66
PHGDH-202ENST00000369409 FGD6Q6ZV73 1430 aa25.44■■□□□ 1.66
PHGDH-202ENST00000369409 ATP10BO94823 1461 aa25.43■■□□□ 1.66
PHGDH-202ENST00000369409 OSCARQ8IYS5 282 aa25.43■■□□□ 1.66
PHGDH-202ENST00000369409 ABCC2Q92887 1545 aa25.43■■□□□ 1.66
PHGDH-202ENST00000369409 ADCY10Q96PN6 1610 aa25.43■■□□□ 1.66
PHGDH-202ENST00000369409 CDK11AQ9UQ88 783 aaPredicted RBP25.42■■□□□ 1.66
PHGDH-202ENST00000369409 TROQ12816 1431 aaPredicted RBP25.41■■□□□ 1.66
PHGDH-202ENST00000369409 KIF14Q15058 1648 aa25.39■■□□□ 1.66
PHGDH-202ENST00000369409 FAM50AQ14320 339 aaKnown RBP25.37■■□□□ 1.65
PHGDH-202ENST00000369409 PTPN23Q9H3S7 1636 aa25.37■■□□□ 1.65
PHGDH-202ENST00000369409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.34■■□□□ 1.65
PHGDH-202ENST00000369409 ITGAEP38570 1179 aa25.33■■□□□ 1.65
PHGDH-202ENST00000369409 UHRF1BP1LA0JNW5 1464 aa25.32■■□□□ 1.64
PHGDH-202ENST00000369409 ITSN2Q9NZM3 1697 aa25.32■■□□□ 1.64
PHGDH-202ENST00000369409 ZCCHC11Q5TAX3 1644 aaKnown RBP25.31■■□□□ 1.64
PHGDH-202ENST00000369409 TCOF1Q13428 1488 aaKnown RBP25.28■■□□□ 1.64
PHGDH-202ENST00000369409 PLEKHD1A6NEE1 506 aa25.27■■□□□ 1.64
PHGDH-202ENST00000369409 MIA2Q96PC5 1412 aa25.27■■□□□ 1.64
PHGDH-202ENST00000369409 CDC42BPAQ5VT25 1732 aa25.24■■□□□ 1.63
PHGDH-202ENST00000369409 KDM5BQ9UGL1 1544 aa25.23■■□□□ 1.63
PHGDH-202ENST00000369409 CCER1Q8TC90 406 aaPredicted RBP25.23■■□□□ 1.63
PHGDH-202ENST00000369409 ABCC10Q5T3U5 1492 aa25.21■■□□□ 1.63
PHGDH-202ENST00000369409 GPATCH8Q9UKJ3 1502 aaKnown RBP25.19■■□□□ 1.62
PHGDH-202ENST00000369409 PTPRKQ15262 1439 aa25.14■■□□□ 1.62
PHGDH-202ENST00000369409 TTC37Q6PGP7 1564 aa25.13■■□□□ 1.61
PHGDH-202ENST00000369409 ZEB1P37275 1124 aaPredicted RBP25.13■■□□□ 1.61
PHGDH-202ENST00000369409 PREX2Q70Z35 1606 aa25.12■■□□□ 1.61
PHGDH-202ENST00000369409 CAMSAP2Q08AD1 1489 aa25.12■■□□□ 1.61
PHGDH-202ENST00000369409 DNMT1P26358 1616 aaKnown RBP25.11■■□□□ 1.61
PHGDH-202ENST00000369409 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.1■■□□□ 1.616e-6■■■■■ 38.2
PHGDH-202ENST00000369409 SETD5Q9C0A6 1442 aa25.1■■□□□ 1.61
PHGDH-202ENST00000369409 CDC42BPBQ9Y5S2 1711 aa25.1■■□□□ 1.61
PHGDH-202ENST00000369409 RAB3GAP2Q9H2M9 1393 aa25.09■■□□□ 1.61
PHGDH-202ENST00000369409 MYO5CQ9NQX4 1742 aa25.09■■□□□ 1.61
PHGDH-202ENST00000369409 CFDP1Q9UEE9 299 aaPredicted RBP25.09■■□□□ 1.61
PHGDH-202ENST00000369409 ZNF644Q9H582 1327 aaPredicted RBP25.07■■□□□ 1.6
PHGDH-202ENST00000369409 CROCC2H7BZ55 1655 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms