RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 KIF27Q86VH2 1401 aa28.09■■■□□ 2.09
CKS1B-202ENST00000368436 CUL7Q14999 1698 aa28.06■■■□□ 2.08
CKS1B-202ENST00000368436 KIAA0586Q9BVV6 1533 aa27.98■■■□□ 2.07
CKS1B-202ENST00000368436 KIF13AQ9H1H9 1805 aa27.93■■■□□ 2.06
CKS1B-202ENST00000368436 CARMIL1Q5VZK9 1371 aa27.88■■■□□ 2.05
CKS1B-202ENST00000368436 ADCY10Q96PN6 1610 aa27.85■■■□□ 2.05
CKS1B-202ENST00000368436 MAPKBP1O60336 1514 aa27.81■■■□□ 2.04
CKS1B-202ENST00000368436 NPM1P06748 294 aaKnown RBP eCLIP27.8■■■□□ 2.04
CKS1B-202ENST00000368436 ABCC10Q5T3U5 1492 aa27.77■■■□□ 2.04
CKS1B-202ENST00000368436 IQGAP2Q13576 1575 aa27.72■■■□□ 2.03
CKS1B-202ENST00000368436 FAM69CQ0P6D2 419 aa27.71■■■□□ 2.03
CKS1B-202ENST00000368436 DIP2BQ9P265 1576 aa27.71■■■□□ 2.03
CKS1B-202ENST00000368436 PTPRGP23470 1445 aa27.7■■■□□ 2.03
CKS1B-202ENST00000368436 CARMIL2Q6F5E8 1435 aa27.68■■■□□ 2.02
CKS1B-202ENST00000368436 TNIKQ9UKE5 1360 aa27.66■■■□□ 2.02
CKS1B-202ENST00000368436 RAPGEF2Q9Y4G8 1499 aa27.64■■■□□ 2.01
CKS1B-202ENST00000368436 AEBP2Q6ZN18 517 aaPredicted RBP27.63■■■□□ 2.01
CKS1B-202ENST00000368436 DISP1Q96F81 1524 aa27.6■■■□□ 2.01
CKS1B-202ENST00000368436 ABCC2Q92887 1545 aa27.57■■■□□ 2
CKS1B-202ENST00000368436 UGGT2Q9NYU1 1516 aa27.57■■■□□ 2
CKS1B-202ENST00000368436 TTBK1Q5TCY1 1321 aaPredicted RBP27.56■■■□□ 2
CKS1B-202ENST00000368436 UHRF1BP1LA0JNW5 1464 aa27.55■■■□□ 2
CKS1B-202ENST00000368436 TSPOAP1O95153 1857 aa27.52■■■□□ 2
CKS1B-202ENST00000368436 UACAQ9BZF9 1416 aa27.5■■□□□ 1.99
CKS1B-202ENST00000368436 KIAA0556O60303 1618 aa27.47■■□□□ 1.99
CKS1B-202ENST00000368436 PLB1Q6P1J6 1458 aa27.46■■□□□ 1.99
CKS1B-202ENST00000368436 CTTNBP2Q8WZ74 1663 aa27.46■■□□□ 1.99
CKS1B-202ENST00000368436 ASXL2Q76L83 1435 aa27.45■■□□□ 1.98
CKS1B-202ENST00000368436 KDM6BO15054 1643 aa27.45■■□□□ 1.98
CKS1B-202ENST00000368436 GLI2P10070 1586 aa27.43■■□□□ 1.98
CKS1B-202ENST00000368436 KDM5BQ9UGL1 1544 aa27.41■■□□□ 1.98
CKS1B-202ENST00000368436 PRXQ9BXM0 1461 aa27.38■■□□□ 1.97
CKS1B-202ENST00000368436 PPRC1Q5VV67 1664 aaKnown RBP27.36■■□□□ 1.97
CKS1B-202ENST00000368436 ZCCHC11Q5TAX3 1644 aaKnown RBP27.36■■□□□ 1.97
CKS1B-202ENST00000368436 GOLGA3Q08378 1498 aa27.32■■□□□ 1.96
CKS1B-202ENST00000368436 EPRSP07814 1512 aaKnown RBP27.31■■□□□ 1.96
CKS1B-202ENST00000368436 MAP3K4Q9Y6R4 1608 aa27.28■■□□□ 1.96
CKS1B-202ENST00000368436 ABCA8O94911 1581 aa27.24■■□□□ 1.95
CKS1B-202ENST00000368436 WDR7Q9Y4E6 1490 aa27.19■■□□□ 1.94
CKS1B-202ENST00000368436 KDM4FA0A1W2PPD8 638 aa27.17■■□□□ 1.94
CKS1B-202ENST00000368436 TEX14Q8IWB6 1497 aa27.16■■□□□ 1.94
CKS1B-202ENST00000368436 CSRNP3Q8WYN3 585 aa27.15■■□□□ 1.94
CKS1B-202ENST00000368436 COL17A1Q9UMD9 1497 aaPredicted RBP27.14■■□□□ 1.94
CKS1B-202ENST00000368436 CFAP43Q8NDM7 1665 aa27.08■■□□□ 1.93
CKS1B-202ENST00000368436 SAMD9Q5K651 1589 aa27.06■■□□□ 1.92
CKS1B-202ENST00000368436 EEA1Q15075 1411 aa27.05■■□□□ 1.92
CKS1B-202ENST00000368436 MAGI3Q5TCQ9 1506 aa27.04■■□□□ 1.92
CKS1B-202ENST00000368436 P3H3Q8IVL6 736 aa27.03■■□□□ 1.92
CKS1B-202ENST00000368436 CD109Q6YHK3 1445 aa27.02■■□□□ 1.92
CKS1B-202ENST00000368436 FAM9AQ8IZU1 332 aaPredicted RBP27.02■■□□□ 1.92
CKS1B-202ENST00000368436 KCNH8Q96L42 1107 aa27.02■■□□□ 1.92
CKS1B-202ENST00000368436 ATP10BO94823 1461 aa27■■□□□ 1.91
CKS1B-202ENST00000368436 ADGRL1O94910 1474 aa26.94■■□□□ 1.9
CKS1B-202ENST00000368436 RAPGEF6Q8TEU7 1601 aa26.94■■□□□ 1.9
CKS1B-202ENST00000368436 ARID3CA6NKF2 412 aa26.9■■□□□ 1.9
CKS1B-202ENST00000368436 ABCA9Q8IUA7 1624 aa26.88■■□□□ 1.89
CKS1B-202ENST00000368436 KIF21BO75037 1637 aa26.86■■□□□ 1.89
CKS1B-202ENST00000368436 ARAP3Q8WWN8 1544 aa26.83■■□□□ 1.89
CKS1B-202ENST00000368436 NUP153P49790 1475 aaKnown RBP26.82■■□□□ 1.88
CKS1B-202ENST00000368436 FHOD3Q2V2M9 1422 aa26.81■■□□□ 1.88
CKS1B-202ENST00000368436 RANGAP1P46060 587 aaPredicted RBP26.79■■□□□ 1.88
CKS1B-202ENST00000368436 PHLDB1Q86UU1 1377 aa26.78■■□□□ 1.88
CKS1B-202ENST00000368436 EFCAB5A4FU69 1503 aa26.77■■□□□ 1.88
CKS1B-202ENST00000368436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.75■■□□□ 1.87
CKS1B-202ENST00000368436 HNRNPUL2Q1KMD3 747 aaKnown RBP26.75■■□□□ 1.87
CKS1B-202ENST00000368436 NEO1Q92859 1461 aa26.71■■□□□ 1.87
CKS1B-202ENST00000368436 PLEKHD1A6NEE1 506 aa26.66■■□□□ 1.86
CKS1B-202ENST00000368436 CHIC1Q5VXU3 224 aa26.64■■□□□ 1.86
CKS1B-202ENST00000368436 RAPGEF3O95398 923 aa26.62■■□□□ 1.85
CKS1B-202ENST00000368436 FRMPD1Q5SYB0 1578 aa26.61■■□□□ 1.85
CKS1B-202ENST00000368436 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.59■■□□□ 1.852e-6■■□□□ 13.9
CKS1B-202ENST00000368436 UBTFP17480 764 aaKnown RBP26.58■■□□□ 1.85
CKS1B-202ENST00000368436 HECW2Q9P2P5 1572 aa26.58■■□□□ 1.85
CKS1B-202ENST00000368436 CDK13Q14004 1512 aaKnown RBP26.55■■□□□ 1.84
CKS1B-202ENST00000368436 CFAP74Q9C0B2 1584 aa26.54■■□□□ 1.84
CKS1B-202ENST00000368436 TTC37Q6PGP7 1564 aa26.54■■□□□ 1.84
CKS1B-202ENST00000368436 RICTORQ6R327 1708 aa26.53■■□□□ 1.84
CKS1B-202ENST00000368436 ARHGAP35Q9NRY4 1499 aa26.53■■□□□ 1.84
CKS1B-202ENST00000368436 ADAMTSL3P82987 1691 aa26.53■■□□□ 1.84
CKS1B-202ENST00000368436 FANCAO15360 1455 aa26.52■■□□□ 1.84
CKS1B-202ENST00000368436 AKNAQ7Z591 1439 aa26.52■■□□□ 1.84
CKS1B-202ENST00000368436 EHMT2Q96KQ7 1210 aa26.52■■□□□ 1.84
CKS1B-202ENST00000368436 FMN1Q68DA7 1419 aa26.51■■□□□ 1.83
CKS1B-202ENST00000368436 DENND4BO75064 1496 aaPredicted RBP26.5■■□□□ 1.83
CKS1B-202ENST00000368436 HECW1Q76N89 1606 aa26.49■■□□□ 1.83
CKS1B-202ENST00000368436 BCORL1Q5H9F3 1711 aa26.46■■□□□ 1.83
CKS1B-202ENST00000368436 ARHGEF40Q8TER5 1519 aa26.44■■□□□ 1.82
CKS1B-202ENST00000368436 PTPRMP28827 1452 aa26.42■■□□□ 1.82
CKS1B-202ENST00000368436 PLCH2O75038 1416 aa26.42■■□□□ 1.82
CKS1B-202ENST00000368436 ZMYM4Q5VZL5 1548 aa26.41■■□□□ 1.82
CKS1B-202ENST00000368436 ATP1B4Q9UN42 357 aaPredicted RBP26.4■■□□□ 1.82
CKS1B-202ENST00000368436 MYO5CQ9NQX4 1742 aa26.38■■□□□ 1.81
CKS1B-202ENST00000368436 LRRIQ1Q96JM4 1722 aa26.37■■□□□ 1.81
CKS1B-202ENST00000368436 MADDQ8WXG6 1647 aa26.37■■□□□ 1.81
CKS1B-202ENST00000368436 CDK11AQ9UQ88 783 aaPredicted RBP26.37■■□□□ 1.81
CKS1B-202ENST00000368436 ARID4BQ4LE39 1312 aaPredicted RBP26.37■■□□□ 1.81
CKS1B-202ENST00000368436 MAGI2Q86UL8 1455 aa26.35■■□□□ 1.81
CKS1B-202ENST00000368436 KIF14Q15058 1648 aa26.34■■□□□ 1.81
CKS1B-202ENST00000368436 ZFYVE16Q7Z3T8 1539 aa26.34■■□□□ 1.81
CKS1B-202ENST00000368436 SCAPERQ9BY12 1400 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms