RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 EEA1Q15075 1411 aa20.97■□□□□ 0.95
EFNA1-201ENST00000368406 JPH4Q96JJ6 628 aa20.97■□□□□ 0.95
EFNA1-201ENST00000368406 ARAP1Q96P48 1450 aa20.97■□□□□ 0.95
EFNA1-201ENST00000368406 CYB5RLQ6IPT4 315 aa20.96■□□□□ 0.95
EFNA1-201ENST00000368406 FAM9AQ8IZU1 332 aaPredicted RBP20.96■□□□□ 0.95
EFNA1-201ENST00000368406 PRXQ9BXM0 1461 aa20.92■□□□□ 0.94
EFNA1-201ENST00000368406 CSRNP3Q8WYN3 585 aa20.92■□□□□ 0.94
EFNA1-201ENST00000368406 PRG4Q92954 1404 aaPredicted RBP20.89■□□□□ 0.93
EFNA1-201ENST00000368406 ERCC6L2Q5T890 1561 aa20.87■□□□□ 0.93
EFNA1-201ENST00000368406 IQGAP2Q13576 1575 aa20.82■□□□□ 0.92
EFNA1-201ENST00000368406 KIF21BO75037 1637 aa20.75■□□□□ 0.91
EFNA1-201ENST00000368406 CARMIL2Q6F5E8 1435 aa20.75■□□□□ 0.91
EFNA1-201ENST00000368406 CTTNBP2Q8WZ74 1663 aa20.74■□□□□ 0.91
EFNA1-201ENST00000368406 UGGT2Q9NYU1 1516 aa20.74■□□□□ 0.91
EFNA1-201ENST00000368406 EHMT2Q96KQ7 1210 aa20.71■□□□□ 0.91
EFNA1-201ENST00000368406 DISP1Q96F81 1524 aa20.68■□□□□ 0.9
EFNA1-201ENST00000368406 TNIKQ9UKE5 1360 aa20.68■□□□□ 0.9
EFNA1-201ENST00000368406 GOLGA3Q08378 1498 aa20.67■□□□□ 0.9
EFNA1-201ENST00000368406 PTPRGP23470 1445 aa20.66■□□□□ 0.9
EFNA1-201ENST00000368406 KIAA0556O60303 1618 aa20.61■□□□□ 0.89
EFNA1-201ENST00000368406 UBTFP17480 764 aaKnown RBP20.6■□□□□ 0.89
EFNA1-201ENST00000368406 ADCY10Q96PN6 1610 aa20.56■□□□□ 0.88
EFNA1-201ENST00000368406 NPM1P06748 294 aaKnown RBP eCLIP20.53■□□□□ 0.88
EFNA1-201ENST00000368406 TTBK1Q5TCY1 1321 aaPredicted RBP20.53■□□□□ 0.88
EFNA1-201ENST00000368406 UACAQ9BZF9 1416 aa20.53■□□□□ 0.88
EFNA1-201ENST00000368406 UHRF1BP1LA0JNW5 1464 aa20.52■□□□□ 0.88
EFNA1-201ENST00000368406 TRHP20396 242 aaPredicted RBP20.51■□□□□ 0.87
EFNA1-201ENST00000368406 SAMD9Q5K651 1589 aa20.5■□□□□ 0.87
EFNA1-201ENST00000368406 ABCC2Q92887 1545 aa20.47■□□□□ 0.87
EFNA1-201ENST00000368406 RANGAP1P46060 587 aaPredicted RBP20.46■□□□□ 0.87
EFNA1-201ENST00000368406 MAPKBP1O60336 1514 aa20.46■□□□□ 0.87
EFNA1-201ENST00000368406 LOC105371045A0A1W2PR82 267 aa20.44■□□□□ 0.86
EFNA1-201ENST00000368406 P3H3Q8IVL6 736 aa20.44■□□□□ 0.86
EFNA1-201ENST00000368406 EFCAB5A4FU69 1503 aa20.42■□□□□ 0.86
EFNA1-201ENST00000368406 PLB1Q6P1J6 1458 aa20.42■□□□□ 0.86
EFNA1-201ENST00000368406 ABCA8O94911 1581 aa20.41■□□□□ 0.86
EFNA1-201ENST00000368406 KDM5BQ9UGL1 1544 aa20.41■□□□□ 0.86
EFNA1-201ENST00000368406 ABCC10Q5T3U5 1492 aa20.36■□□□□ 0.85
EFNA1-201ENST00000368406 FHOD3Q2V2M9 1422 aa20.35■□□□□ 0.85
EFNA1-201ENST00000368406 ASXL2Q76L83 1435 aa20.33■□□□□ 0.85
EFNA1-201ENST00000368406 ZCCHC11Q5TAX3 1644 aaKnown RBP20.32■□□□□ 0.84
EFNA1-201ENST00000368406 KIF13AQ9H1H9 1805 aa20.32■□□□□ 0.84
EFNA1-201ENST00000368406 FAM69CQ0P6D2 419 aa20.31■□□□□ 0.84
EFNA1-201ENST00000368406 ARHGAP35Q9NRY4 1499 aa20.3■□□□□ 0.84
EFNA1-201ENST00000368406 CEP162Q5TB80 1403 aa20.3■□□□□ 0.84
EFNA1-201ENST00000368406 CLIP1P30622 1438 aa20.29■□□□□ 0.84
EFNA1-201ENST00000368406 RAPGEF6Q8TEU7 1601 aa20.29■□□□□ 0.84
EFNA1-201ENST00000368406 DIP2BQ9P265 1576 aa20.29■□□□□ 0.84
EFNA1-201ENST00000368406 ATP10BO94823 1461 aa20.26■□□□□ 0.83
EFNA1-201ENST00000368406 FMN1Q68DA7 1419 aa20.25■□□□□ 0.83
EFNA1-201ENST00000368406 NUP153P49790 1475 aaKnown RBP20.23■□□□□ 0.83
EFNA1-201ENST00000368406 WDR7Q9Y4E6 1490 aa20.23■□□□□ 0.83
EFNA1-201ENST00000368406 GLI2P10070 1586 aa20.22■□□□□ 0.83
EFNA1-201ENST00000368406 EPRSP07814 1512 aaKnown RBP20.21■□□□□ 0.83
EFNA1-201ENST00000368406 ARID3CA6NKF2 412 aa20.19■□□□□ 0.82
EFNA1-201ENST00000368406 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.14■□□□□ 0.81
EFNA1-201ENST00000368406 HNRNPUL2Q1KMD3 747 aaKnown RBP20.14■□□□□ 0.81
EFNA1-201ENST00000368406 KCNH8Q96L42 1107 aa20.13■□□□□ 0.81
EFNA1-201ENST00000368406 HECW1Q76N89 1606 aa20.11■□□□□ 0.81
EFNA1-201ENST00000368406 MAP3K4Q9Y6R4 1608 aa20.11■□□□□ 0.81
EFNA1-201ENST00000368406 PLEKHD1A6NEE1 506 aa20.1■□□□□ 0.81
EFNA1-201ENST00000368406 CASKIN1Q8WXD9 1431 aa20.09■□□□□ 0.81
EFNA1-201ENST00000368406 TSPOAP1O95153 1857 aa20.09■□□□□ 0.81
EFNA1-201ENST00000368406 ATP1B4Q9UN42 357 aaPredicted RBP20.08■□□□□ 0.8
EFNA1-201ENST00000368406 PCF11O94913 1555 aaKnown RBP20.07■□□□□ 0.8
EFNA1-201ENST00000368406 CD109Q6YHK3 1445 aa20.05■□□□□ 0.8
EFNA1-201ENST00000368406 PPRC1Q5VV67 1664 aaKnown RBP20.05■□□□□ 0.8
EFNA1-201ENST00000368406 CFAP43Q8NDM7 1665 aa20.05■□□□□ 0.8
EFNA1-201ENST00000368406 CDK13Q14004 1512 aaKnown RBP20.05■□□□□ 0.8
EFNA1-201ENST00000368406 CDK11AQ9UQ88 783 aaPredicted RBP20.04■□□□□ 0.8
EFNA1-201ENST00000368406 TEX14Q8IWB6 1497 aa20.04■□□□□ 0.8
EFNA1-201ENST00000368406 FYCO1Q9BQS8 1478 aa20.03■□□□□ 0.8
EFNA1-201ENST00000368406 MAGI3Q5TCQ9 1506 aa20.03■□□□□ 0.8
EFNA1-201ENST00000368406 ABCA9Q8IUA7 1624 aa20.01■□□□□ 0.79
EFNA1-201ENST00000368406 VPS8Q8N3P4 1428 aa20.01■□□□□ 0.79
EFNA1-201ENST00000368406 CCDC18Q5T9S5 1454 aa20.01■□□□□ 0.79
EFNA1-201ENST00000368406 LRRIQ1Q96JM4 1722 aa19.98■□□□□ 0.79
EFNA1-201ENST00000368406 KDM6BO15054 1643 aa19.95■□□□□ 0.78
EFNA1-201ENST00000368406 TROQ12816 1431 aaPredicted RBP19.94■□□□□ 0.78
EFNA1-201ENST00000368406 PHLDB1Q86UU1 1377 aa19.93■□□□□ 0.78
EFNA1-201ENST00000368406 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.93■□□□□ 0.78
EFNA1-201ENST00000368406 COL17A1Q9UMD9 1497 aaPredicted RBP19.88■□□□□ 0.77
EFNA1-201ENST00000368406 NEO1Q92859 1461 aa19.88■□□□□ 0.77
EFNA1-201ENST00000368406 TTC37Q6PGP7 1564 aa19.88■□□□□ 0.77
EFNA1-201ENST00000368406 APLP2Q06481 763 aa19.87■□□□□ 0.77
EFNA1-201ENST00000368406 KIF14Q15058 1648 aa19.87■□□□□ 0.77
EFNA1-201ENST00000368406 ARAP3Q8WWN8 1544 aa19.86■□□□□ 0.77
EFNA1-201ENST00000368406 PLCH2O75038 1416 aa19.85■□□□□ 0.77
EFNA1-201ENST00000368406 TIAM1Q13009 1591 aa19.82■□□□□ 0.76
EFNA1-201ENST00000368406 FANCAO15360 1455 aa19.81■□□□□ 0.76
EFNA1-201ENST00000368406 CFAP74Q9C0B2 1584 aa19.8■□□□□ 0.76
EFNA1-201ENST00000368406 AKNAQ7Z591 1439 aa19.79■□□□□ 0.76
EFNA1-201ENST00000368406 MTUS2Q5JR59 1369 aa19.79■□□□□ 0.76
EFNA1-201ENST00000368406 MYO5CQ9NQX4 1742 aa19.79■□□□□ 0.76
EFNA1-201ENST00000368406 EFCAB2Q5VUJ9 269 aa19.78■□□□□ 0.76
EFNA1-201ENST00000368406 MAP3K1Q13233 1512 aa19.76■□□□□ 0.75
EFNA1-201ENST00000368406 EHBP1L1Q8N3D4 1523 aa19.75■□□□□ 0.75
EFNA1-201ENST00000368406 RAPGEF3O95398 923 aa19.73■□□□□ 0.75
EFNA1-201ENST00000368406 DENND4BO75064 1496 aaPredicted RBP19.72■□□□□ 0.75
EFNA1-201ENST00000368406 ARHGAP5Q13017 1502 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms