RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 CUL7Q14999 1698 aa19.29■□□□□ 0.68
USF1-203ENST00000368021 CEP162Q5TB80 1403 aa19.25■□□□□ 0.67
USF1-203ENST00000368021 CEP170Q5SW79 1584 aa19.23■□□□□ 0.67
USF1-203ENST00000368021 CLASP1Q7Z460 1538 aa19.23■□□□□ 0.67
USF1-203ENST00000368021 NUP160Q12769 1436 aa19.22■□□□□ 0.67
USF1-203ENST00000368021 ARHGEF11O15085 1522 aa19.21■□□□□ 0.67
USF1-203ENST00000368021 RIMBP3CA6NJZ7 1639 aa19.19■□□□□ 0.66
USF1-203ENST00000368021 RIMBP3BA6NNM3 1639 aa19.19■□□□□ 0.66
USF1-203ENST00000368021 RIMBP3Q9UFD9 1639 aa19.19■□□□□ 0.66
USF1-203ENST00000368021 CYB5RLQ6IPT4 315 aa19.17■□□□□ 0.66
USF1-203ENST00000368021 JPH4Q96JJ6 628 aa19.14■□□□□ 0.65
USF1-203ENST00000368021 CLIP1P30622 1438 aa19.13■□□□□ 0.65
USF1-203ENST00000368021 KIAA0586Q9BVV6 1533 aa19.07■□□□□ 0.64
USF1-203ENST00000368021 ERCC6L2Q5T890 1561 aa19.07■□□□□ 0.64
USF1-203ENST00000368021 ARAP1Q96P48 1450 aa19.07■□□□□ 0.64
USF1-203ENST00000368021 PRG4Q92954 1404 aaPredicted RBP19.06■□□□□ 0.64
USF1-203ENST00000368021 CTTNBP2Q8WZ74 1663 aa19.04■□□□□ 0.64
USF1-203ENST00000368021 SHROOM2Q13796 1616 aa19.02■□□□□ 0.64
USF1-203ENST00000368021 TTBK1Q5TCY1 1321 aaPredicted RBP19.01■□□□□ 0.63
USF1-203ENST00000368021 PELP1Q8IZL8 1130 aaKnown RBP19■□□□□ 0.63
USF1-203ENST00000368021 IQGAP2Q13576 1575 aa18.97■□□□□ 0.63
USF1-203ENST00000368021 ARHGAP35Q9NRY4 1499 aa18.97■□□□□ 0.63
USF1-203ENST00000368021 VPS8Q8N3P4 1428 aa18.96■□□□□ 0.63
USF1-203ENST00000368021 RANGAP1P46060 587 aaPredicted RBP18.95■□□□□ 0.62
USF1-203ENST00000368021 EFCAB5A4FU69 1503 aa18.93■□□□□ 0.62
USF1-203ENST00000368021 CARMIL2Q6F5E8 1435 aa18.89■□□□□ 0.61
USF1-203ENST00000368021 P3H3Q8IVL6 736 aa18.86■□□□□ 0.61
USF1-203ENST00000368021 SAMD9Q5K651 1589 aa18.86■□□□□ 0.61
USF1-203ENST00000368021 DISP1Q96F81 1524 aa18.85■□□□□ 0.61
USF1-203ENST00000368021 PTPRGP23470 1445 aa18.85■□□□□ 0.61
USF1-203ENST00000368021 UGGT2Q9NYU1 1516 aa18.84■□□□□ 0.61
USF1-203ENST00000368021 KIAA0556O60303 1618 aa18.79■□□□□ 0.6
USF1-203ENST00000368021 TRHP20396 242 aaPredicted RBP18.78■□□□□ 0.6
USF1-203ENST00000368021 FHOD3Q2V2M9 1422 aa18.77■□□□□ 0.6
USF1-203ENST00000368021 MYT1Q01538 1121 aa18.77■□□□□ 0.59
USF1-203ENST00000368021 FMN1Q68DA7 1419 aa18.75■□□□□ 0.59
USF1-203ENST00000368021 NPM1P06748 294 aaKnown RBP eCLIP18.74■□□□□ 0.59
USF1-203ENST00000368021 APLP2Q06481 763 aa18.74■□□□□ 0.59
USF1-203ENST00000368021 TRIM26Q12899 539 aaPredicted RBP18.73■□□□□ 0.59
USF1-203ENST00000368021 ADCY10Q96PN6 1610 aa18.7■□□□□ 0.58
USF1-203ENST00000368021 FYCO1Q9BQS8 1478 aa18.7■□□□□ 0.58
USF1-203ENST00000368021 MAP3K1Q13233 1512 aa18.69■□□□□ 0.58
USF1-203ENST00000368021 CASKIN1Q8WXD9 1431 aa18.69■□□□□ 0.58
USF1-203ENST00000368021 UACAQ9BZF9 1416 aa18.69■□□□□ 0.58
USF1-203ENST00000368021 PCF11O94913 1555 aaKnown RBP18.69■□□□□ 0.58
USF1-203ENST00000368021 PLB1Q6P1J6 1458 aa18.68■□□□□ 0.58
USF1-203ENST00000368021 PPARGC1BQ86YN6 1023 aaKnown RBP18.67■□□□□ 0.58
USF1-203ENST00000368021 ARID3CA6NKF2 412 aa18.66■□□□□ 0.58
USF1-203ENST00000368021 PCGF6Q9BYE7 350 aa18.64■□□□□ 0.57
USF1-203ENST00000368021 TIAM1Q13009 1591 aa18.62■□□□□ 0.57
USF1-203ENST00000368021 ABCC2Q92887 1545 aa18.62■□□□□ 0.57
USF1-203ENST00000368021 CFAP43Q8NDM7 1665 aa18.6■□□□□ 0.57
USF1-203ENST00000368021 UHRF1BP1LA0JNW5 1464 aa18.59■□□□□ 0.57
USF1-203ENST00000368021 ABCA8O94911 1581 aa18.56■□□□□ 0.56
USF1-203ENST00000368021 FAM69CQ0P6D2 419 aa18.56■□□□□ 0.56
USF1-203ENST00000368021 ATP1B4Q9UN42 357 aaPredicted RBP18.56■□□□□ 0.56
USF1-203ENST00000368021 HECW1Q76N89 1606 aa18.55■□□□□ 0.56
USF1-203ENST00000368021 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.55■□□□□ 0.56
USF1-203ENST00000368021 HNRNPUL2Q1KMD3 747 aaKnown RBP18.55■□□□□ 0.56
USF1-203ENST00000368021 KANK4Q5T7N3 995 aaPredicted RBP18.55■□□□□ 0.56
USF1-203ENST00000368021 KDM5BQ9UGL1 1544 aa18.54■□□□□ 0.56
USF1-203ENST00000368021 LRRC9Q6ZRR7 1453 aa18.53■□□□□ 0.56
USF1-203ENST00000368021 MAPKBP1O60336 1514 aa18.53■□□□□ 0.56
USF1-203ENST00000368021 CCDC18Q5T9S5 1454 aa18.53■□□□□ 0.56
USF1-203ENST00000368021 ASXL2Q76L83 1435 aa18.53■□□□□ 0.56
USF1-203ENST00000368021 LRRIQ1Q96JM4 1722 aa18.51■□□□□ 0.55
USF1-203ENST00000368021 ZCCHC11Q5TAX3 1644 aaKnown RBP18.51■□□□□ 0.55
USF1-203ENST00000368021 RAPGEF6Q8TEU7 1601 aa18.49■□□□□ 0.55
USF1-203ENST00000368021 KCNH8Q96L42 1107 aa18.49■□□□□ 0.55
USF1-203ENST00000368021 ABCC10Q5T3U5 1492 aa18.49■□□□□ 0.55
USF1-203ENST00000368021 EPRSP07814 1512 aaKnown RBP18.48■□□□□ 0.55
USF1-203ENST00000368021 ATP10BO94823 1461 aa18.47■□□□□ 0.55
USF1-203ENST00000368021 NUP153P49790 1475 aaKnown RBP18.47■□□□□ 0.55
USF1-203ENST00000368021 KIF13AQ9H1H9 1805 aa18.44■□□□□ 0.54
USF1-203ENST00000368021 DIP2BQ9P265 1576 aa18.43■□□□□ 0.54
USF1-203ENST00000368021 WDR7Q9Y4E6 1490 aa18.41■□□□□ 0.54
USF1-203ENST00000368021 MTUS2Q5JR59 1369 aa18.41■□□□□ 0.54
USF1-203ENST00000368021 EHBP1L1Q8N3D4 1523 aa18.41■□□□□ 0.54
USF1-203ENST00000368021 RRBP1Q9P2E9 1410 aaKnown RBP18.4■□□□□ 0.54
USF1-203ENST00000368021 CDK13Q14004 1512 aaKnown RBP18.39■□□□□ 0.53
USF1-203ENST00000368021 PLEKHD1A6NEE1 506 aa18.37■□□□□ 0.53
USF1-203ENST00000368021 MAGI3Q5TCQ9 1506 aa18.36■□□□□ 0.53
USF1-203ENST00000368021 TSPOAP1O95153 1857 aa18.36■□□□□ 0.53
USF1-203ENST00000368021 SUPT6HQ7KZ85 1726 aaKnown RBP18.35■□□□□ 0.53
USF1-203ENST00000368021 PHLDB1Q86UU1 1377 aa18.34■□□□□ 0.53
USF1-203ENST00000368021 CDK11AQ9UQ88 783 aaPredicted RBP18.33■□□□□ 0.53
USF1-203ENST00000368021 CCNB3Q8WWL7 1395 aa18.32■□□□□ 0.52
USF1-203ENST00000368021 NCOA2Q15596 1464 aa18.31■□□□□ 0.52
USF1-203ENST00000368021 GLI2P10070 1586 aa18.3■□□□□ 0.52
USF1-203ENST00000368021 CD109Q6YHK3 1445 aa18.28■□□□□ 0.52
USF1-203ENST00000368021 TROQ12816 1431 aaPredicted RBP18.27■□□□□ 0.52
USF1-203ENST00000368021 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.26■□□□□ 0.51
USF1-203ENST00000368021 MYOM3Q5VTT5 1437 aa18.25■□□□□ 0.51
USF1-203ENST00000368021 MAP3K4Q9Y6R4 1608 aa18.25■□□□□ 0.51
USF1-203ENST00000368021 FGD6Q6ZV73 1430 aa18.24■□□□□ 0.51
USF1-203ENST00000368021 PPRC1Q5VV67 1664 aaKnown RBP18.21■□□□□ 0.51
USF1-203ENST00000368021 MIA2Q96PC5 1412 aa18.18■□□□□ 0.5
USF1-203ENST00000368021 ABCA9Q8IUA7 1624 aa18.18■□□□□ 0.5
USF1-203ENST00000368021 TEX14Q8IWB6 1497 aa18.18■□□□□ 0.5
USF1-203ENST00000368021 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms