RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 JPH4Q96JJ6 628 aa40.58■■■■■ 4.09
PFDN2-201ENST00000368010 KIAA0586Q9BVV6 1533 aa40.56■■■■■ 4.08
PFDN2-201ENST00000368010 PRG4Q92954 1404 aaPredicted RBP40.54■■■■■ 4.08
PFDN2-201ENST00000368010 RAPGEF2Q9Y4G8 1499 aa40.45■■■■■ 4.07
PFDN2-201ENST00000368010 IQGAP2Q13576 1575 aa40.29■■■■■ 4.04
PFDN2-201ENST00000368010 PRXQ9BXM0 1461 aa40.24■■■■■ 4.03
PFDN2-201ENST00000368010 TRHP20396 242 aaPredicted RBP40.2■■■■■ 4.03
PFDN2-201ENST00000368010 EEA1Q15075 1411 aa40.16■■■■■ 4.02
PFDN2-201ENST00000368010 CARMIL2Q6F5E8 1435 aa40.16■■■■■ 4.02
PFDN2-201ENST00000368010 CSRNP3Q8WYN3 585 aa40.14■■■■■ 4.02
PFDN2-201ENST00000368010 CHIC1Q5VXU3 224 aa40.11■■■■■ 4.01
PFDN2-201ENST00000368010 UGGT2Q9NYU1 1516 aa40.06■■■■■ 4
PFDN2-201ENST00000368010 CTTNBP2Q8WZ74 1663 aa40.05■■■■■ 4
PFDN2-201ENST00000368010 PTPRGP23470 1445 aa40.03■■■■■ 4
PFDN2-201ENST00000368010 TNIKQ9UKE5 1360 aa40.03■■■■■ 4
PFDN2-201ENST00000368010 DISP1Q96F81 1524 aa40.01■■■■■ 4
PFDN2-201ENST00000368010 TTBK1Q5TCY1 1321 aaPredicted RBP39.94■■■■□ 3.98
PFDN2-201ENST00000368010 FAM9AQ8IZU1 332 aaPredicted RBP39.94■■■■□ 3.98
PFDN2-201ENST00000368010 ADCY10Q96PN6 1610 aa39.94■■■■□ 3.98
PFDN2-201ENST00000368010 KIAA0556O60303 1618 aa39.91■■■■□ 3.98
PFDN2-201ENST00000368010 NPM1P06748 294 aaKnown RBP eCLIP39.91■■■■□ 3.98
PFDN2-201ENST00000368010 GOLGA3Q08378 1498 aa39.84■■■■□ 3.97
PFDN2-201ENST00000368010 MAPKBP1O60336 1514 aa39.77■■■■□ 3.96
PFDN2-201ENST00000368010 UACAQ9BZF9 1416 aa39.75■■■■□ 3.95
PFDN2-201ENST00000368010 KIF21BO75037 1637 aa39.74■■■■□ 3.95
PFDN2-201ENST00000368010 UHRF1BP1LA0JNW5 1464 aa39.73■■■■□ 3.95
PFDN2-201ENST00000368010 ABCC2Q92887 1545 aa39.7■■■■□ 3.95
PFDN2-201ENST00000368010 ABCC10Q5T3U5 1492 aa39.62■■■■□ 3.93
PFDN2-201ENST00000368010 KIF13AQ9H1H9 1805 aa39.59■■■■□ 3.93
PFDN2-201ENST00000368010 PLB1Q6P1J6 1458 aa39.55■■■■□ 3.92
PFDN2-201ENST00000368010 SAMD9Q5K651 1589 aa39.55■■■■□ 3.92
PFDN2-201ENST00000368010 FAM69CQ0P6D2 419 aa39.54■■■■□ 3.92
PFDN2-201ENST00000368010 DIP2BQ9P265 1576 aa39.54■■■■□ 3.92
PFDN2-201ENST00000368010 KDM5BQ9UGL1 1544 aa39.53■■■■□ 3.92
PFDN2-201ENST00000368010 P3H3Q8IVL6 736 aa39.52■■■■□ 3.92
PFDN2-201ENST00000368010 ABCA8O94911 1581 aa39.49■■■■□ 3.91
PFDN2-201ENST00000368010 ASXL2Q76L83 1435 aa39.48■■■■□ 3.91
PFDN2-201ENST00000368010 RANGAP1P46060 587 aaPredicted RBP39.45■■■■□ 3.91
PFDN2-201ENST00000368010 ZCCHC11Q5TAX3 1644 aaKnown RBP39.43■■■■□ 3.9
PFDN2-201ENST00000368010 EHMT2Q96KQ7 1210 aa39.43■■■■□ 3.9
PFDN2-201ENST00000368010 UBTFP17480 764 aaKnown RBP39.42■■■■□ 3.9
PFDN2-201ENST00000368010 EFCAB5A4FU69 1503 aa39.35■■■■□ 3.89
PFDN2-201ENST00000368010 FHOD3Q2V2M9 1422 aa39.31■■■■□ 3.88
PFDN2-201ENST00000368010 GLI2P10070 1586 aa39.28■■■■□ 3.88
PFDN2-201ENST00000368010 WDR7Q9Y4E6 1490 aa39.24■■■■□ 3.87
PFDN2-201ENST00000368010 EPRSP07814 1512 aaKnown RBP39.24■■■■□ 3.87
PFDN2-201ENST00000368010 RAPGEF6Q8TEU7 1601 aa39.22■■■■□ 3.87
PFDN2-201ENST00000368010 TSPOAP1O95153 1857 aa39.16■■■■□ 3.86
PFDN2-201ENST00000368010 ARID3CA6NKF2 412 aa39.16■■■■□ 3.86
PFDN2-201ENST00000368010 ATP10BO94823 1461 aa39.15■■■■□ 3.86
PFDN2-201ENST00000368010 NUP153P49790 1475 aaKnown RBP39.09■■■■□ 3.85
PFDN2-201ENST00000368010 ARHGAP35Q9NRY4 1499 aa39.09■■■■□ 3.85
PFDN2-201ENST00000368010 MAP3K4Q9Y6R4 1608 aa39.07■■■■□ 3.85
PFDN2-201ENST00000368010 KCNH8Q96L42 1107 aa39.03■■■■□ 3.84
PFDN2-201ENST00000368010 PPRC1Q5VV67 1664 aaKnown RBP39.02■■■■□ 3.84
PFDN2-201ENST00000368010 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.01■■■■□ 3.84
PFDN2-201ENST00000368010 HNRNPUL2Q1KMD3 747 aaKnown RBP39.01■■■■□ 3.84
PFDN2-201ENST00000368010 KDM6BO15054 1643 aa39■■■■□ 3.83
PFDN2-201ENST00000368010 FMN1Q68DA7 1419 aa38.99■■■■□ 3.83
PFDN2-201ENST00000368010 TEX14Q8IWB6 1497 aa38.95■■■■□ 3.83
PFDN2-201ENST00000368010 CFAP43Q8NDM7 1665 aa38.92■■■■□ 3.82
PFDN2-201ENST00000368010 CD109Q6YHK3 1445 aa38.9■■■■□ 3.82
PFDN2-201ENST00000368010 MAGI3Q5TCQ9 1506 aa38.85■■■■□ 3.81
PFDN2-201ENST00000368010 HECW1Q76N89 1606 aa38.83■■■■□ 3.81
PFDN2-201ENST00000368010 PLEKHD1A6NEE1 506 aa38.82■■■■□ 3.8
PFDN2-201ENST00000368010 ATP1B4Q9UN42 357 aaPredicted RBP38.8■■■■□ 3.8
PFDN2-201ENST00000368010 CLIP1P30622 1438 aa38.79■■■■□ 3.8
PFDN2-201ENST00000368010 CDK13Q14004 1512 aaKnown RBP38.79■■■■□ 3.8
PFDN2-201ENST00000368010 ABCA9Q8IUA7 1624 aa38.78■■■■□ 3.8
PFDN2-201ENST00000368010 COL17A1Q9UMD9 1497 aaPredicted RBP38.7■■■■□ 3.79
PFDN2-201ENST00000368010 CASKIN1Q8WXD9 1431 aa38.64■■■■□ 3.78
PFDN2-201ENST00000368010 PCF11O94913 1555 aaKnown RBP38.63■■■■□ 3.77
PFDN2-201ENST00000368010 CDK11AQ9UQ88 783 aaPredicted RBP38.61■■■■□ 3.77
PFDN2-201ENST00000368010 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.57■■■■□ 3.76
PFDN2-201ENST00000368010 PHLDB1Q86UU1 1377 aa38.55■■■■□ 3.76
PFDN2-201ENST00000368010 FYCO1Q9BQS8 1478 aa38.54■■■■□ 3.76
PFDN2-201ENST00000368010 CEP162Q5TB80 1403 aa38.54■■■■□ 3.76
PFDN2-201ENST00000368010 CCDC18Q5T9S5 1454 aa38.54■■■■□ 3.76
PFDN2-201ENST00000368010 LRRIQ1Q96JM4 1722 aa38.53■■■■□ 3.76
PFDN2-201ENST00000368010 NEO1Q92859 1461 aa38.53■■■■□ 3.76
PFDN2-201ENST00000368010 ARAP3Q8WWN8 1544 aa38.51■■■■□ 3.76
PFDN2-201ENST00000368010 TTC37Q6PGP7 1564 aa38.51■■■■□ 3.76
PFDN2-201ENST00000368010 TROQ12816 1431 aaPredicted RBP38.48■■■■□ 3.75
PFDN2-201ENST00000368010 LOC105371045A0A1W2PR82 267 aa38.45■■■■□ 3.75
PFDN2-201ENST00000368010 KIF14Q15058 1648 aa38.42■■■■□ 3.74
PFDN2-201ENST00000368010 FANCAO15360 1455 aa38.4■■■■□ 3.74
PFDN2-201ENST00000368010 CFAP74Q9C0B2 1584 aa38.39■■■■□ 3.74
PFDN2-201ENST00000368010 AEBP2Q6ZN18 517 aaPredicted RBP38.37■■■■□ 3.73
PFDN2-201ENST00000368010 PLCH2O75038 1416 aa38.35■■■■□ 3.73
PFDN2-201ENST00000368010 AKNAQ7Z591 1439 aa38.33■■■■□ 3.73
PFDN2-201ENST00000368010 RAPGEF3O95398 923 aa38.29■■■■□ 3.72
PFDN2-201ENST00000368010 MYO5CQ9NQX4 1742 aa38.29■■■■□ 3.72
PFDN2-201ENST00000368010 DENND4BO75064 1496 aaPredicted RBP38.26■■■■□ 3.72
PFDN2-201ENST00000368010 FRMPD1Q5SYB0 1578 aa38.23■■■■□ 3.71
PFDN2-201ENST00000368010 EFCAB2Q5VUJ9 269 aa38.21■■■■□ 3.71
PFDN2-201ENST00000368010 KDM4FA0A1W2PPD8 638 aa38.19■■■■□ 3.7
PFDN2-201ENST00000368010 ADGRL1O94910 1474 aa38.19■■■■□ 3.7
PFDN2-201ENST00000368010 ARHGAP5Q13017 1502 aa38.17■■■■□ 3.7
PFDN2-201ENST00000368010 RICTORQ6R327 1708 aa38.15■■■■□ 3.7
PFDN2-201ENST00000368010 SCAPERQ9BY12 1400 aa38.12■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms