RNA–Protein interactions for RNA: ENST00000367393.7

C1orf53-201, Transcript of chromosome 1 open reading frame 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf53, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf53-201ENST00000367393 CARMIL1Q5VZK9 1371 aa24.85■■□□□ 1.57
C1orf53-201ENST00000367393 SHROOM2Q13796 1616 aa24.83■■□□□ 1.57
C1orf53-201ENST00000367393 RUSC2Q8N2Y8 1516 aa24.83■■□□□ 1.57
C1orf53-201ENST00000367393 JPH4Q96JJ6 628 aa24.8■■□□□ 1.56
C1orf53-201ENST00000367393 ERCC6L2Q5T890 1561 aa24.8■■□□□ 1.56
C1orf53-201ENST00000367393 KIAA0586Q9BVV6 1533 aa24.73■■□□□ 1.55
C1orf53-201ENST00000367393 PRG4Q92954 1404 aaPredicted RBP24.73■■□□□ 1.55
C1orf53-201ENST00000367393 RAPGEF2Q9Y4G8 1499 aa24.68■■□□□ 1.54
C1orf53-201ENST00000367393 IQGAP2Q13576 1575 aa24.57■■□□□ 1.52
C1orf53-201ENST00000367393 PRXQ9BXM0 1461 aa24.54■■□□□ 1.52
C1orf53-201ENST00000367393 TRHP20396 242 aaPredicted RBP24.54■■□□□ 1.52
C1orf53-201ENST00000367393 CSRNP3Q8WYN3 585 aa24.53■■□□□ 1.52
C1orf53-201ENST00000367393 CARMIL2Q6F5E8 1435 aa24.48■■□□□ 1.51
C1orf53-201ENST00000367393 CTTNBP2Q8WZ74 1663 aa24.48■■□□□ 1.51
C1orf53-201ENST00000367393 EEA1Q15075 1411 aa24.47■■□□□ 1.51
C1orf53-201ENST00000367393 FAM9AQ8IZU1 332 aaPredicted RBP24.44■■□□□ 1.5
C1orf53-201ENST00000367393 UGGT2Q9NYU1 1516 aa24.42■■□□□ 1.5
C1orf53-201ENST00000367393 PTPRGP23470 1445 aa24.42■■□□□ 1.5
C1orf53-201ENST00000367393 TNIKQ9UKE5 1360 aa24.42■■□□□ 1.5
C1orf53-201ENST00000367393 TTBK1Q5TCY1 1321 aaPredicted RBP24.41■■□□□ 1.5
C1orf53-201ENST00000367393 DISP1Q96F81 1524 aa24.4■■□□□ 1.5
C1orf53-201ENST00000367393 ADCY10Q96PN6 1610 aa24.37■■□□□ 1.49
C1orf53-201ENST00000367393 NPM1P06748 294 aaKnown RBP eCLIP24.37■■□□□ 1.49
C1orf53-201ENST00000367393 KIAA0556O60303 1618 aa24.32■■□□□ 1.48
C1orf53-201ENST00000367393 GOLGA3Q08378 1498 aa24.28■■□□□ 1.48
C1orf53-201ENST00000367393 KIF21BO75037 1637 aa24.24■■□□□ 1.47
C1orf53-201ENST00000367393 UACAQ9BZF9 1416 aa24.24■■□□□ 1.47
C1orf53-201ENST00000367393 KIF13AQ9H1H9 1805 aa24.22■■□□□ 1.47
C1orf53-201ENST00000367393 MAPKBP1O60336 1514 aa24.22■■□□□ 1.47
C1orf53-201ENST00000367393 UHRF1BP1LA0JNW5 1464 aa24.21■■□□□ 1.47
C1orf53-201ENST00000367393 ABCC2Q92887 1545 aa24.2■■□□□ 1.46
C1orf53-201ENST00000367393 P3H3Q8IVL6 736 aa24.17■■□□□ 1.46
C1orf53-201ENST00000367393 ABCC10Q5T3U5 1492 aa24.14■■□□□ 1.46
C1orf53-201ENST00000367393 FAM69CQ0P6D2 419 aa24.14■■□□□ 1.45
C1orf53-201ENST00000367393 EHMT2Q96KQ7 1210 aa24.14■■□□□ 1.45
C1orf53-201ENST00000367393 RANGAP1P46060 587 aaPredicted RBP24.13■■□□□ 1.45
C1orf53-201ENST00000367393 PLB1Q6P1J6 1458 aa24.12■■□□□ 1.45
C1orf53-201ENST00000367393 SAMD9Q5K651 1589 aa24.12■■□□□ 1.45
C1orf53-201ENST00000367393 KDM5BQ9UGL1 1544 aa24.1■■□□□ 1.45
C1orf53-201ENST00000367393 UBTFP17480 764 aaKnown RBP24.1■■□□□ 1.45
C1orf53-201ENST00000367393 DIP2BQ9P265 1576 aa24.09■■□□□ 1.45
C1orf53-201ENST00000367393 ABCA8O94911 1581 aa24.08■■□□□ 1.45
C1orf53-201ENST00000367393 ZCCHC11Q5TAX3 1644 aaKnown RBP24.07■■□□□ 1.44
C1orf53-201ENST00000367393 ASXL2Q76L83 1435 aa24.07■■□□□ 1.44
C1orf53-201ENST00000367393 TSPOAP1O95153 1857 aa24■■□□□ 1.43
C1orf53-201ENST00000367393 EFCAB5A4FU69 1503 aa23.97■■□□□ 1.43
C1orf53-201ENST00000367393 FHOD3Q2V2M9 1422 aa23.97■■□□□ 1.43
C1orf53-201ENST00000367393 GLI2P10070 1586 aa23.95■■□□□ 1.42
C1orf53-201ENST00000367393 RAPGEF6Q8TEU7 1601 aa23.94■■□□□ 1.42
C1orf53-201ENST00000367393 EPRSP07814 1512 aaKnown RBP23.93■■□□□ 1.42
C1orf53-201ENST00000367393 ARID3CA6NKF2 412 aa23.92■■□□□ 1.42
C1orf53-201ENST00000367393 ATP10BO94823 1461 aa23.9■■□□□ 1.42
C1orf53-201ENST00000367393 WDR7Q9Y4E6 1490 aa23.9■■□□□ 1.42
C1orf53-201ENST00000367393 KCNH8Q96L42 1107 aa23.87■■□□□ 1.41
C1orf53-201ENST00000367393 ARHGAP35Q9NRY4 1499 aa23.85■■□□□ 1.41
C1orf53-201ENST00000367393 MAP3K4Q9Y6R4 1608 aa23.84■■□□□ 1.41
C1orf53-201ENST00000367393 PPRC1Q5VV67 1664 aaKnown RBP23.83■■□□□ 1.41
C1orf53-201ENST00000367393 NUP153P49790 1475 aaKnown RBP23.83■■□□□ 1.41
C1orf53-201ENST00000367393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.83■■□□□ 1.41
C1orf53-201ENST00000367393 HNRNPUL2Q1KMD3 747 aaKnown RBP23.83■■□□□ 1.41
C1orf53-201ENST00000367393 KDM6BO15054 1643 aa23.77■■□□□ 1.4
C1orf53-201ENST00000367393 FMN1Q68DA7 1419 aa23.76■■□□□ 1.39
C1orf53-201ENST00000367393 CFAP43Q8NDM7 1665 aa23.76■■□□□ 1.39
C1orf53-201ENST00000367393 CD109Q6YHK3 1445 aa23.74■■□□□ 1.39
C1orf53-201ENST00000367393 ATP1B4Q9UN42 357 aaPredicted RBP23.72■■□□□ 1.39
C1orf53-201ENST00000367393 TEX14Q8IWB6 1497 aa23.72■■□□□ 1.39
C1orf53-201ENST00000367393 PLEKHD1A6NEE1 506 aa23.71■■□□□ 1.39
C1orf53-201ENST00000367393 MAGI3Q5TCQ9 1506 aa23.67■■□□□ 1.38
C1orf53-201ENST00000367393 HECW1Q76N89 1606 aa23.66■■□□□ 1.38
C1orf53-201ENST00000367393 ABCA9Q8IUA7 1624 aa23.66■■□□□ 1.38
C1orf53-201ENST00000367393 CLIP1P30622 1438 aa23.66■■□□□ 1.38
C1orf53-201ENST00000367393 CDK13Q14004 1512 aaKnown RBP23.65■■□□□ 1.38
C1orf53-201ENST00000367393 COL17A1Q9UMD9 1497 aaPredicted RBP23.62■■□□□ 1.37
C1orf53-201ENST00000367393 LRRIQ1Q96JM4 1722 aa23.6■■□□□ 1.37
C1orf53-201ENST00000367393 LOC105371045A0A1W2PR82 267 aa23.58■■□□□ 1.37
C1orf53-201ENST00000367393 FOXD1Q16676 465 aa23.57■■□□□ 1.36
C1orf53-201ENST00000367393 CASKIN1Q8WXD9 1431 aa23.57■■□□□ 1.36
C1orf53-201ENST00000367393 CDK11AQ9UQ88 783 aaPredicted RBP23.56■■□□□ 1.36
C1orf53-201ENST00000367393 PCF11O94913 1555 aaKnown RBP23.55■■□□□ 1.36
C1orf53-201ENST00000367393 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.53■■□□□ 1.36
C1orf53-201ENST00000367393 CEP162Q5TB80 1403 aa23.5■■□□□ 1.35
C1orf53-201ENST00000367393 PHLDB1Q86UU1 1377 aa23.5■■□□□ 1.35
C1orf53-201ENST00000367393 FYCO1Q9BQS8 1478 aa23.49■■□□□ 1.35
C1orf53-201ENST00000367393 ARAP3Q8WWN8 1544 aa23.49■■□□□ 1.35
C1orf53-201ENST00000367393 TTC37Q6PGP7 1564 aa23.48■■□□□ 1.35
C1orf53-201ENST00000367393 CCDC18Q5T9S5 1454 aa23.48■■□□□ 1.35
C1orf53-201ENST00000367393 NEO1Q92859 1461 aa23.47■■□□□ 1.35
C1orf53-201ENST00000367393 TROQ12816 1431 aaPredicted RBP23.46■■□□□ 1.35
C1orf53-201ENST00000367393 KIF14Q15058 1648 aa23.43■■□□□ 1.34
C1orf53-201ENST00000367393 FANCAO15360 1455 aa23.41■■□□□ 1.34
C1orf53-201ENST00000367393 MYO5CQ9NQX4 1742 aa23.4■■□□□ 1.34
C1orf53-201ENST00000367393 PLCH2O75038 1416 aa23.4■■□□□ 1.34
C1orf53-201ENST00000367393 CFAP74Q9C0B2 1584 aa23.4■■□□□ 1.34
C1orf53-201ENST00000367393 RAPGEF3O95398 923 aa23.39■■□□□ 1.33
C1orf53-201ENST00000367393 AKNAQ7Z591 1439 aa23.39■■□□□ 1.33
C1orf53-201ENST00000367393 EFCAB2Q5VUJ9 269 aa23.34■■□□□ 1.33
C1orf53-201ENST00000367393 KDM4FA0A1W2PPD8 638 aa23.33■■□□□ 1.33
C1orf53-201ENST00000367393 DENND4BO75064 1496 aaPredicted RBP23.31■■□□□ 1.32
C1orf53-201ENST00000367393 RICTORQ6R327 1708 aa23.3■■□□□ 1.32
C1orf53-201ENST00000367393 FRMPD1Q5SYB0 1578 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms