RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 POLR3GLQ9BT43 218 aa16.19■□□□□ 0.18
PRKN-206ENST00000366898 EIF4G1Q04637 1599 aaKnown RBP16.18■□□□□ 0.18
PRKN-206ENST00000366898 ARXQ96QS3 562 aa16.18■□□□□ 0.18
PRKN-206ENST00000366898 KANK4Q5T7N3 995 aaPredicted RBP16.15■□□□□ 0.18
PRKN-206ENST00000366898 ANP32CO43423 234 aa16.14■□□□□ 0.17
PRKN-206ENST00000366898 RAPGEF2Q9Y4G8 1499 aa16.14■□□□□ 0.17
PRKN-206ENST00000366898 CC2D2AQ9P2K1 1620 aa16.14■□□□□ 0.17
PRKN-206ENST00000366898 ERCC6Q03468 1493 aa16.12■□□□□ 0.17
PRKN-206ENST00000366898 NEFMP07197 916 aa16.08■□□□□ 0.16
PRKN-206ENST00000366898 KIF27Q86VH2 1401 aa16.07■□□□□ 0.16
PRKN-206ENST00000366898 VPS8Q8N3P4 1428 aa16.07■□□□□ 0.16
PRKN-206ENST00000366898 HIRIP3Q9BW71 556 aaPredicted RBP16.06■□□□□ 0.16
PRKN-206ENST00000366898 HNRNPUQ00839 825 aaKnown RBP eCLIP16.02■□□□□ 0.15
PRKN-206ENST00000366898 SALL2Q9Y467 1007 aaPredicted RBP16.02■□□□□ 0.15
PRKN-206ENST00000366898 DDX10Q13206 875 aaKnown RBP16.01■□□□□ 0.15
PRKN-206ENST00000366898 SYNJ1O43426 1573 aa16■□□□□ 0.15
PRKN-206ENST00000366898 CUX2O14529 1486 aa16■□□□□ 0.15
PRKN-206ENST00000366898 LAS1LQ9Y4W2 734 aaKnown RBP15.99■□□□□ 0.15
PRKN-206ENST00000366898 FBLN2P98095 1184 aa15.99■□□□□ 0.15
PRKN-206ENST00000366898 NOP58Q9Y2X3 529 aaKnown RBP15.99■□□□□ 0.15
PRKN-206ENST00000366898 VSIG10Q8N0Z9 540 aa15.97■□□□□ 0.15
PRKN-206ENST00000366898 NAP1L5Q96NT1 182 aaPredicted RBP15.97■□□□□ 0.15
PRKN-206ENST00000366898 CHIC2Q9UKJ5 165 aa15.95■□□□□ 0.14
PRKN-206ENST00000366898 SIN3AQ96ST3 1273 aa15.93■□□□□ 0.14
PRKN-206ENST00000366898 ERICH6BQ5W0A0 696 aa15.93■□□□□ 0.14
PRKN-206ENST00000366898 ARID4BQ4LE39 1312 aaPredicted RBP15.92■□□□□ 0.14
PRKN-206ENST00000366898 CARMIL1Q5VZK9 1371 aa15.92■□□□□ 0.14
PRKN-206ENST00000366898 PKNOX2Q96KN3 472 aa15.92■□□□□ 0.14
PRKN-206ENST00000366898 TIMELESSQ9UNS1 1208 aa15.91■□□□□ 0.14
PRKN-206ENST00000366898 NCAPD3P42695 1498 aa15.88■□□□□ 0.13
PRKN-206ENST00000366898 PODXL2Q9NZ53 605 aa15.88■□□□□ 0.13
PRKN-206ENST00000366898 PEG3Q9GZU2 1588 aa15.88■□□□□ 0.13
PRKN-206ENST00000366898 CCNB3Q8WWL7 1395 aa15.87■□□□□ 0.13
PRKN-206ENST00000366898 AMER1Q5JTC6 1135 aaPredicted RBP15.86■□□□□ 0.13
PRKN-206ENST00000366898 A0A0U1RQG5 324 aaPredicted RBP15.85■□□□□ 0.13
PRKN-206ENST00000366898 MTUS2Q5JR59 1369 aa15.84■□□□□ 0.13
PRKN-206ENST00000366898 ZNF326Q5BKZ1 582 aaKnown RBP15.83■□□□□ 0.12
PRKN-206ENST00000366898 RRP7BPQ9NSQ0 103 aa15.82■□□□□ 0.12
PRKN-206ENST00000366898 ZNF777Q9ULD5 760 aaPredicted RBP15.81■□□□□ 0.12
PRKN-206ENST00000366898 CADPSQ9ULU8 1353 aa15.81■□□□□ 0.12
PRKN-206ENST00000366898 KIF21BO75037 1637 aa15.8■□□□□ 0.12
PRKN-206ENST00000366898 TDRD9Q8NDG6 1382 aaKnown RBP15.8■□□□□ 0.12
PRKN-206ENST00000366898 FAM9BQ8IZU0 186 aa15.79■□□□□ 0.12
PRKN-206ENST00000366898 PDS5BQ9NTI5 1447 aa15.77■□□□□ 0.11
PRKN-206ENST00000366898 TONSLQ96HA7 1378 aa15.77■□□□□ 0.11
PRKN-206ENST00000366898 B4GALNT3Q6L9W6 998 aa15.76■□□□□ 0.11
PRKN-206ENST00000366898 IL27Q8NEV9 243 aa15.74■□□□□ 0.11
PRKN-206ENST00000366898 IGF1RP08069 1367 aa15.74■□□□□ 0.11
PRKN-206ENST00000366898 DHX57Q6P158 1386 aaKnown RBP15.74■□□□□ 0.11
PRKN-206ENST00000366898 ARAP1Q96P48 1450 aa15.74■□□□□ 0.11
PRKN-206ENST00000366898 RAB3GAP2Q9H2M9 1393 aa15.74■□□□□ 0.11
PRKN-206ENST00000366898 FHOD3Q2V2M9 1422 aa15.74■□□□□ 0.11
PRKN-206ENST00000366898 PPM1GO15355 546 aaPredicted RBP15.72■□□□□ 0.11
PRKN-206ENST00000366898 SLC24A1O60721 1099 aa15.71■□□□□ 0.11
PRKN-206ENST00000366898 CUX1P39880 1505 aa15.71■□□□□ 0.1
PRKN-206ENST00000366898 HMGXB3Q12766 1538 aa15.7■□□□□ 0.1
PRKN-206ENST00000366898 ANP32BQ92688 251 aaKnown RBP15.7■□□□□ 0.1
PRKN-206ENST00000366898 RAD54L2Q9Y4B4 1467 aa15.69■□□□□ 0.1
PRKN-206ENST00000366898 FGD5Q6ZNL6 1462 aa15.68■□□□□ 0.1
PRKN-206ENST00000366898 HSP90AA1P07900 732 aaKnown RBP15.68■□□□□ 0.1
PRKN-206ENST00000366898 TOP2BQ02880 1626 aa15.67■□□□□ 0.1
PRKN-206ENST00000366898 TNNT2P45379 298 aaPredicted RBP15.67■□□□□ 0.1
PRKN-206ENST00000366898 SENP3-EIF4A1A0A087X0R7 540 aa15.66■□□□□ 0.1
PRKN-206ENST00000366898 KCNH8Q96L42 1107 aa15.66■□□□□ 0.1
PRKN-206ENST00000366898 NESP48681 1621 aa15.66■□□□□ 0.1
PRKN-206ENST00000366898 PRXQ9BXM0 1461 aa15.65■□□□□ 0.1
PRKN-206ENST00000366898 FANCD2Q9BXW9 1451 aa15.65■□□□□ 0.1
PRKN-206ENST00000366898 ARID3AQ99856 593 aa15.65■□□□□ 0.1
PRKN-206ENST00000366898 CFTRP13569 1480 aa15.65■□□□□ 0.1
PRKN-206ENST00000366898 HSP90AA2PQ14568 343 aaPredicted RBP15.65■□□□□ 0.1
PRKN-206ENST00000366898 FHAD1B1AJZ9 1412 aa15.64■□□□□ 0.09
PRKN-206ENST00000366898 TRIM44Q96DX7 344 aaPredicted RBP15.64■□□□□ 0.09
PRKN-206ENST00000366898 PPP4R2Q9NY27 417 aa15.63■□□□□ 0.09
PRKN-206ENST00000366898 SETD5Q9C0A6 1442 aa15.63■□□□□ 0.09
PRKN-206ENST00000366898 ARHGAP35Q9NRY4 1499 aa15.63■□□□□ 0.09
PRKN-206ENST00000366898 FOXD1Q16676 465 aa15.61■□□□□ 0.09
PRKN-206ENST00000366898 CDK11BP21127 795 aaKnown RBP15.59■□□□□ 0.09
PRKN-206ENST00000366898 UBE2Q2Q8WVN8 375 aa15.59■□□□□ 0.09
PRKN-206ENST00000366898 CHMP7Q8WUX9 453 aaPredicted RBP15.59■□□□□ 0.09
PRKN-206ENST00000366898 PNNQ9H307 717 aaKnown RBP15.59■□□□□ 0.09
PRKN-206ENST00000366898 RSPH6AQ9H0K4 717 aa15.58■□□□□ 0.08
PRKN-206ENST00000366898 PHLDB1Q86UU1 1377 aa15.58■□□□□ 0.08
PRKN-206ENST00000366898 ERICH3Q5RHP9 1530 aa15.53■□□□□ 0.08
PRKN-206ENST00000366898 DDRGK1Q96HY6 314 aa15.53■□□□□ 0.08
PRKN-206ENST00000366898 SLC4A1APQ9BWU0 796 aaKnown RBP15.52■□□□□ 0.08
PRKN-206ENST00000366898 MRS2Q9HD23 443 aa15.51■□□□□ 0.07
PRKN-206ENST00000366898 FANCIQ9NVI1 1328 aa15.51■□□□□ 0.07
PRKN-206ENST00000366898 KDM2AQ9Y2K7 1162 aa15.49■□□□□ 0.07
PRKN-206ENST00000366898 IPO9Q96P70 1041 aaKnown RBP15.49■□□□□ 0.07
PRKN-206ENST00000366898 PPP1R15AO75807 674 aaPredicted RBP15.47■□□□□ 0.07
PRKN-206ENST00000366898 BRPF3Q9ULD4 1205 aa15.46■□□□□ 0.06
PRKN-206ENST00000366898 LRRC9Q6ZRR7 1453 aa15.45■□□□□ 0.06
PRKN-206ENST00000366898 FMN1Q68DA7 1419 aa15.45■□□□□ 0.06
PRKN-206ENST00000366898 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.45■□□□□ 0.06
PRKN-206ENST00000366898 RRBP1Q9P2E9 1410 aaKnown RBP15.45■□□□□ 0.06
PRKN-206ENST00000366898 EIF4G2P78344 907 aaKnown RBP eCLIP15.45■□□□□ 0.066e-6■■■■□ 25.1
PRKN-206ENST00000366898 CFDP1Q9UEE9 299 aaPredicted RBP15.45■□□□□ 0.06
PRKN-206ENST00000366898 MSH5O43196 834 aa15.44■□□□□ 0.06
PRKN-206ENST00000366898 PLEKHG5O94827 1062 aa15.43■□□□□ 0.06
PRKN-206ENST00000366898 UPF2Q9HAU5 1272 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms