RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 SHROOM2Q13796 1616 aa26.09■■□□□ 1.77
PRKN-203ENST00000366894 CARMIL1Q5VZK9 1371 aa26.06■■□□□ 1.76
PRKN-203ENST00000366894 JPH4Q96JJ6 628 aa25.96■■□□□ 1.75
PRKN-203ENST00000366894 KIAA0586Q9BVV6 1533 aa25.95■■□□□ 1.74
PRKN-203ENST00000366894 PRG4Q92954 1404 aaPredicted RBP25.93■■□□□ 1.74
PRKN-203ENST00000366894 KIF13AQ9H1H9 1805 aa25.91■■□□□ 1.74
PRKN-203ENST00000366894 RAPGEF2Q9Y4G8 1499 aa25.88■■□□□ 1.73
PRKN-203ENST00000366894 PRXQ9BXM0 1461 aa25.79■■□□□ 1.72
PRKN-203ENST00000366894 IQGAP2Q13576 1575 aa25.78■■□□□ 1.72
PRKN-203ENST00000366894 CHIC1Q5VXU3 224 aa25.76■■□□□ 1.71
PRKN-203ENST00000366894 ABCC10Q5T3U5 1492 aa25.75■■□□□ 1.71
PRKN-203ENST00000366894 MAPKBP1O60336 1514 aa25.73■■□□□ 1.71
PRKN-203ENST00000366894 NPM1P06748 294 aaKnown RBP eCLIP25.73■■□□□ 1.71
PRKN-203ENST00000366894 FAM69CQ0P6D2 419 aa25.72■■□□□ 1.71
PRKN-203ENST00000366894 DIP2BQ9P265 1576 aa25.69■■□□□ 1.7
PRKN-203ENST00000366894 CSRNP3Q8WYN3 585 aa25.69■■□□□ 1.7
PRKN-203ENST00000366894 ADCY10Q96PN6 1610 aa25.67■■□□□ 1.7
PRKN-203ENST00000366894 EEA1Q15075 1411 aa25.67■■□□□ 1.7
PRKN-203ENST00000366894 DISP1Q96F81 1524 aa25.66■■□□□ 1.7
PRKN-203ENST00000366894 UGGT2Q9NYU1 1516 aa25.66■■□□□ 1.7
PRKN-203ENST00000366894 CTTNBP2Q8WZ74 1663 aa25.64■■□□□ 1.7
PRKN-203ENST00000366894 CARMIL2Q6F5E8 1435 aa25.63■■□□□ 1.69
PRKN-203ENST00000366894 TNIKQ9UKE5 1360 aa25.59■■□□□ 1.69
PRKN-203ENST00000366894 PTPRGP23470 1445 aa25.59■■□□□ 1.69
PRKN-203ENST00000366894 KDM6BO15054 1643 aa25.58■■□□□ 1.69
PRKN-203ENST00000366894 FAM9AQ8IZU1 332 aaPredicted RBP25.57■■□□□ 1.68
PRKN-203ENST00000366894 KIAA0556O60303 1618 aa25.55■■□□□ 1.68
PRKN-203ENST00000366894 TTBK1Q5TCY1 1321 aaPredicted RBP25.51■■□□□ 1.67
PRKN-203ENST00000366894 TSPOAP1O95153 1857 aa25.49■■□□□ 1.67
PRKN-203ENST00000366894 KIF21BO75037 1637 aa25.45■■□□□ 1.67
PRKN-203ENST00000366894 GOLGA3Q08378 1498 aa25.44■■□□□ 1.66
PRKN-203ENST00000366894 UHRF1BP1LA0JNW5 1464 aa25.42■■□□□ 1.66
PRKN-203ENST00000366894 KDM4FA0A1W2PPD8 638 aa25.42■■□□□ 1.66
PRKN-203ENST00000366894 UACAQ9BZF9 1416 aa25.42■■□□□ 1.66
PRKN-203ENST00000366894 ABCC2Q92887 1545 aa25.4■■□□□ 1.66
PRKN-203ENST00000366894 SAMD9Q5K651 1589 aa25.35■■□□□ 1.65
PRKN-203ENST00000366894 PLB1Q6P1J6 1458 aa25.34■■□□□ 1.65
PRKN-203ENST00000366894 ASXL2Q76L83 1435 aa25.33■■□□□ 1.65
PRKN-203ENST00000366894 GLI2P10070 1586 aa25.31■■□□□ 1.64
PRKN-203ENST00000366894 KDM5BQ9UGL1 1544 aa25.31■■□□□ 1.64
PRKN-203ENST00000366894 ABCA8O94911 1581 aa25.31■■□□□ 1.64
PRKN-203ENST00000366894 P3H3Q8IVL6 736 aa25.29■■□□□ 1.64
PRKN-203ENST00000366894 PPRC1Q5VV67 1664 aaKnown RBP25.27■■□□□ 1.64
PRKN-203ENST00000366894 EHMT2Q96KQ7 1210 aa25.25■■□□□ 1.63
PRKN-203ENST00000366894 ZCCHC11Q5TAX3 1644 aaKnown RBP25.25■■□□□ 1.63
PRKN-203ENST00000366894 RANGAP1P46060 587 aaPredicted RBP25.22■■□□□ 1.63
PRKN-203ENST00000366894 ADGRL1O94910 1474 aa25.2■■□□□ 1.62
PRKN-203ENST00000366894 UBTFP17480 764 aaKnown RBP25.18■■□□□ 1.62
PRKN-203ENST00000366894 FHOD3Q2V2M9 1422 aa25.18■■□□□ 1.62
PRKN-203ENST00000366894 EPRSP07814 1512 aaKnown RBP25.17■■□□□ 1.62
PRKN-203ENST00000366894 MAP3K4Q9Y6R4 1608 aa25.17■■□□□ 1.62
PRKN-203ENST00000366894 TEX14Q8IWB6 1497 aa25.16■■□□□ 1.62
PRKN-203ENST00000366894 EFCAB5A4FU69 1503 aa25.16■■□□□ 1.62
PRKN-203ENST00000366894 COL17A1Q9UMD9 1497 aaPredicted RBP25.11■■□□□ 1.61
PRKN-203ENST00000366894 RAPGEF6Q8TEU7 1601 aa25.11■■□□□ 1.61
PRKN-203ENST00000366894 WDR7Q9Y4E6 1490 aa25.09■■□□□ 1.61
PRKN-203ENST00000366894 ATP10BO94823 1461 aa25.09■■□□□ 1.61
PRKN-203ENST00000366894 ILDR1Q86SU0 546 aaPredicted RBP25.08■■□□□ 1.61
PRKN-203ENST00000366894 ARHGAP35Q9NRY4 1499 aa25.06■■□□□ 1.6
PRKN-203ENST00000366894 NUP153P49790 1475 aaKnown RBP25.05■■□□□ 1.6
PRKN-203ENST00000366894 ARID3CA6NKF2 412 aa25.05■■□□□ 1.6
PRKN-203ENST00000366894 HECW2Q9P2P5 1572 aa24.99■■□□□ 1.59
PRKN-203ENST00000366894 KCNH8Q96L42 1107 aa24.94■■□□□ 1.58
PRKN-203ENST00000366894 CFAP43Q8NDM7 1665 aa24.92■■□□□ 1.58
PRKN-203ENST00000366894 MAGI3Q5TCQ9 1506 aa24.91■■□□□ 1.58
PRKN-203ENST00000366894 FMN1Q68DA7 1419 aa24.91■■□□□ 1.58
PRKN-203ENST00000366894 CD109Q6YHK3 1445 aa24.91■■□□□ 1.58
PRKN-203ENST00000366894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.86■■□□□ 1.57
PRKN-203ENST00000366894 HNRNPUL2Q1KMD3 747 aaKnown RBP24.86■■□□□ 1.57
PRKN-203ENST00000366894 CDK13Q14004 1512 aaKnown RBP24.86■■□□□ 1.57
PRKN-203ENST00000366894 ABCA9Q8IUA7 1624 aa24.83■■□□□ 1.57
PRKN-203ENST00000366894 CLIP1P30622 1438 aa24.82■■□□□ 1.56
PRKN-203ENST00000366894 HECW1Q76N89 1606 aa24.82■■□□□ 1.56
PRKN-203ENST00000366894 PLEKHD1A6NEE1 506 aa24.78■■□□□ 1.56
PRKN-203ENST00000366894 LRRIQ1Q96JM4 1722 aa24.77■■□□□ 1.56
PRKN-203ENST00000366894 ATP1B4Q9UN42 357 aaPredicted RBP24.76■■□□□ 1.55
PRKN-203ENST00000366894 PCF11O94913 1555 aaKnown RBP24.75■■□□□ 1.55
PRKN-203ENST00000366894 CASKIN1Q8WXD9 1431 aa24.74■■□□□ 1.55
PRKN-203ENST00000366894 ARAP3Q8WWN8 1544 aa24.73■■□□□ 1.55
PRKN-203ENST00000366894 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.71■■□□□ 1.55
PRKN-203ENST00000366894 LOC105371045A0A1W2PR82 267 aa24.7■■□□□ 1.54
PRKN-203ENST00000366894 CEP162Q5TB80 1403 aa24.69■■□□□ 1.54
PRKN-203ENST00000366894 TTC37Q6PGP7 1564 aa24.67■■□□□ 1.54
PRKN-203ENST00000366894 FYCO1Q9BQS8 1478 aa24.66■■□□□ 1.54
PRKN-203ENST00000366894 PHLDB1Q86UU1 1377 aa24.65■■□□□ 1.54
PRKN-203ENST00000366894 TROQ12816 1431 aaPredicted RBP24.62■■□□□ 1.53
PRKN-203ENST00000366894 CCDC18Q5T9S5 1454 aa24.62■■□□□ 1.53
PRKN-203ENST00000366894 NEO1Q92859 1461 aa24.62■■□□□ 1.53
PRKN-203ENST00000366894 KIF14Q15058 1648 aa24.61■■□□□ 1.53
PRKN-203ENST00000366894 CDK11AQ9UQ88 783 aaPredicted RBP24.61■■□□□ 1.53
PRKN-203ENST00000366894 PTPRMP28827 1452 aa24.58■■□□□ 1.53
PRKN-203ENST00000366894 ADAMTSL3P82987 1691 aa24.58■■□□□ 1.53
PRKN-203ENST00000366894 RAPGEF3O95398 923 aa24.55■■□□□ 1.52
PRKN-203ENST00000366894 FANCAO15360 1455 aa24.55■■□□□ 1.52
PRKN-203ENST00000366894 PLCH2O75038 1416 aa24.54■■□□□ 1.52
PRKN-203ENST00000366894 FBXO41Q8TF61 875 aa24.53■■□□□ 1.52
PRKN-203ENST00000366894 FRMPD1Q5SYB0 1578 aa24.52■■□□□ 1.52
PRKN-203ENST00000366894 AKNAQ7Z591 1439 aa24.52■■□□□ 1.52
PRKN-203ENST00000366894 CFAP74Q9C0B2 1584 aa24.5■■□□□ 1.51
PRKN-203ENST00000366894 BCORL1Q5H9F3 1711 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms