RNA–Protein interactions for RNA: ENST00000366809.6

AFDN-204, Transcript of afadin, adherens junction formation factor, humanhuman

TSL 1 (best)

Gene AFDN, Length 4,839 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFDN-204ENST00000366809 LAMC3Q9Y6N6 1575 aa13.36□□□□□ -0.27
AFDN-204ENST00000366809 ACIN1Q9UKV3 1341 aaKnown RBP13.36□□□□□ -0.27
AFDN-204ENST00000366809 PEG3Q9GZU2 1588 aa13.32□□□□□ -0.28
AFDN-204ENST00000366809 TRHP20396 242 aaPredicted RBP13.3□□□□□ -0.28
AFDN-204ENST00000366809 NPM2Q86SE8 214 aaKnown RBP13.29□□□□□ -0.28
AFDN-204ENST00000366809 NEFMP07197 916 aa13.28□□□□□ -0.28
AFDN-204ENST00000366809 STAG3Q9UJ98 1225 aa13.27□□□□□ -0.28
AFDN-204ENST00000366809 ANP32CO43423 234 aa13.26□□□□□ -0.29
AFDN-204ENST00000366809 CARMIL1Q5VZK9 1371 aa13.24□□□□□ -0.29
AFDN-204ENST00000366809 FGD5Q6ZNL6 1462 aa13.23□□□□□ -0.29
AFDN-204ENST00000366809 TSPY4P0CV99 314 aa13.23□□□□□ -0.29
AFDN-204ENST00000366809 TSPY10P0CW01 314 aa13.23□□□□□ -0.29
AFDN-204ENST00000366809 RAD54L2Q9Y4B4 1467 aa13.22□□□□□ -0.29
AFDN-204ENST00000366809 TNNT2P45379 298 aaPredicted RBP13.21□□□□□ -0.29
AFDN-204ENST00000366809 AQRO60306 1485 aaKnown RBP eCLIP13.21□□□□□ -0.298e-7■■■■□ 22
AFDN-204ENST00000366809 IFT140Q96RY7 1462 aa13.21□□□□□ -0.29
AFDN-204ENST00000366809 EEA1Q15075 1411 aa13.2□□□□□ -0.3
AFDN-204ENST00000366809 CYB5RLQ6IPT4 315 aa13.19□□□□□ -0.3
AFDN-204ENST00000366809 HSP90AA1P07900 732 aaKnown RBP13.19□□□□□ -0.3
AFDN-204ENST00000366809 CHGAP10645 457 aaKnown RBP13.19□□□□□ -0.3
AFDN-204ENST00000366809 BCL11AQ9H165 835 aa13.19□□□□□ -0.3
AFDN-204ENST00000366809 CANXP27824 592 aaKnown RBP13.19□□□□□ -0.3
AFDN-204ENST00000366809 TOPBP1Q92547 1522 aa13.19□□□□□ -0.3
AFDN-204ENST00000366809 NBR1Q14596 966 aa13.18□□□□□ -0.3
AFDN-204ENST00000366809 MTUS2Q5JR59 1369 aa13.18□□□□□ -0.3
AFDN-204ENST00000366809 GAPVD1Q14C86 1478 aa13.17□□□□□ -0.3
AFDN-204ENST00000366809 KCNH8Q96L42 1107 aa13.15□□□□□ -0.3
AFDN-204ENST00000366809 PLEKHD1A6NEE1 506 aa13.13□□□□□ -0.31
AFDN-204ENST00000366809 TONSLQ96HA7 1378 aa13.12□□□□□ -0.31
AFDN-204ENST00000366809 CARMIL2Q6F5E8 1435 aa13.12□□□□□ -0.31
AFDN-204ENST00000366809 JPH4Q96JJ6 628 aa13.11□□□□□ -0.31
AFDN-204ENST00000366809 DNMBPQ6XZF7 1577 aa13.11□□□□□ -0.31
AFDN-204ENST00000366809 SLC24A1O60721 1099 aa13.11□□□□□ -0.31
AFDN-204ENST00000366809 UPF2Q9HAU5 1272 aaKnown RBP13.11□□□□□ -0.31
AFDN-204ENST00000366809 FKBP8Q14318 412 aa13.1□□□□□ -0.31
AFDN-204ENST00000366809 GRIN2BQ13224 1484 aa13.1□□□□□ -0.31
AFDN-204ENST00000366809 POLA1P09884 1462 aaPredicted RBP13.1□□□□□ -0.31
AFDN-204ENST00000366809 ARXQ96QS3 562 aa13.1□□□□□ -0.31
AFDN-204ENST00000366809 PLPPR3Q6T4P5 718 aa13.08□□□□□ -0.32
AFDN-204ENST00000366809 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.08□□□□□ -0.325e-9■■□□□ 13.1
AFDN-204ENST00000366809 CLIP1P30622 1438 aa13.08□□□□□ -0.32
AFDN-204ENST00000366809 URB2Q14146 1524 aaKnown RBP13.07□□□□□ -0.32
AFDN-204ENST00000366809 GOLGA3Q08378 1498 aa13.05□□□□□ -0.32
AFDN-204ENST00000366809 CHIC2Q9UKJ5 165 aa13.05□□□□□ -0.32
AFDN-204ENST00000366809 CDK11BP21127 795 aaKnown RBP13.04□□□□□ -0.32
AFDN-204ENST00000366809 CUX1P39880 1505 aa13.03□□□□□ -0.32
AFDN-204ENST00000366809 RAPGEF2Q9Y4G8 1499 aa13.01□□□□□ -0.33
AFDN-204ENST00000366809 TRIM44Q96DX7 344 aaPredicted RBP13.01□□□□□ -0.33
AFDN-204ENST00000366809 SNAPC4Q5SXM2 1469 aa13.01□□□□□ -0.33
AFDN-204ENST00000366809 FHAD1B1AJZ9 1412 aa13.01□□□□□ -0.33
AFDN-204ENST00000366809 ERICH6BQ5W0A0 696 aa13□□□□□ -0.33
AFDN-204ENST00000366809 KIF21AQ7Z4S6 1674 aa12.98□□□□□ -0.33
AFDN-204ENST00000366809 IGF1RP08069 1367 aa12.98□□□□□ -0.33
AFDN-204ENST00000366809 ZNF608Q9ULD9 1512 aaPredicted RBP12.97□□□□□ -0.33
AFDN-204ENST00000366809 ANP32EQ9BTT0 268 aa12.96□□□□□ -0.33
AFDN-204ENST00000366809 SYNJ1O43426 1573 aa12.95□□□□□ -0.34
AFDN-204ENST00000366809 CFDP1Q9UEE9 299 aaPredicted RBP12.95□□□□□ -0.34
AFDN-204ENST00000366809 PTPRGP23470 1445 aa12.95□□□□□ -0.34
AFDN-204ENST00000366809 PPP1R15AO75807 674 aaPredicted RBP12.94□□□□□ -0.34
AFDN-204ENST00000366809 CCDC136Q96JN2 1154 aa12.93□□□□□ -0.34
AFDN-204ENST00000366809 TOP2BQ02880 1626 aa12.93□□□□□ -0.34
AFDN-204ENST00000366809 ARID4BQ4LE39 1312 aaPredicted RBP12.92□□□□□ -0.34
AFDN-204ENST00000366809 WDR62O43379 1518 aa12.91□□□□□ -0.34
AFDN-204ENST00000366809 ABCA10Q8WWZ4 1543 aa12.9□□□□□ -0.34
AFDN-204ENST00000366809 NAP1L5Q96NT1 182 aaPredicted RBP12.9□□□□□ -0.34
AFDN-204ENST00000366809 RUSC2Q8N2Y8 1516 aa12.89□□□□□ -0.35
AFDN-204ENST00000366809 KDM2AQ9Y2K7 1162 aa12.89□□□□□ -0.35
AFDN-204ENST00000366809 MAGI1Q96QZ7 1491 aaPredicted RBP12.89□□□□□ -0.35
AFDN-204ENST00000366809 SYNJ2O15056 1496 aa12.88□□□□□ -0.35
AFDN-204ENST00000366809 TNIKQ9UKE5 1360 aa12.88□□□□□ -0.35
AFDN-204ENST00000366809 HNRNPUQ00839 825 aaKnown RBP eCLIP12.88□□□□□ -0.35
AFDN-204ENST00000366809 PRG4Q92954 1404 aaPredicted RBP12.88□□□□□ -0.35
AFDN-204ENST00000366809 RRP7BPQ9NSQ0 103 aa12.87□□□□□ -0.35
AFDN-204ENST00000366809 CEP162Q5TB80 1403 aa12.87□□□□□ -0.35
AFDN-204ENST00000366809 RTN4Q9NQC3 1192 aaKnown RBP12.87□□□□□ -0.35
AFDN-204ENST00000366809 SCAF1Q9H7N4 1312 aaKnown RBP12.86□□□□□ -0.35
AFDN-204ENST00000366809 NCLP19338 710 aaKnown RBP12.85□□□□□ -0.35
AFDN-204ENST00000366809 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.85□□□□□ -0.35
AFDN-204ENST00000366809 DNTTIP2Q5QJE6 756 aaKnown RBP12.84□□□□□ -0.35
AFDN-204ENST00000366809 C14orf37Q86TY3 774 aa12.84□□□□□ -0.35
AFDN-204ENST00000366809 FAM69CQ0P6D2 419 aa12.84□□□□□ -0.35
AFDN-204ENST00000366809 TMC1Q8TDI8 760 aa12.83□□□□□ -0.36
AFDN-204ENST00000366809 PTMAP06454 111 aaKnown RBP12.82□□□□□ -0.36
AFDN-204ENST00000366809 CDCA8Q53HL2 280 aa12.81□□□□□ -0.36
AFDN-204ENST00000366809 WDR43Q15061 677 aaKnown RBP eCLIP12.81□□□□□ -0.36
AFDN-204ENST00000366809 EIF4G2P78344 907 aaKnown RBP eCLIP12.81□□□□□ -0.36
AFDN-204ENST00000366809 AMER1Q5JTC6 1135 aaPredicted RBP12.8□□□□□ -0.36
AFDN-204ENST00000366809 GOLGA6L22H0YM25 854 aa12.8□□□□□ -0.36
AFDN-204ENST00000366809 DDRGK1Q96HY6 314 aa12.8□□□□□ -0.36
AFDN-204ENST00000366809 FMN1Q68DA7 1419 aa12.79□□□□□ -0.36
AFDN-204ENST00000366809 DDX10Q13206 875 aaKnown RBP12.79□□□□□ -0.36
AFDN-204ENST00000366809 FHOD3Q2V2M9 1422 aa12.79□□□□□ -0.36
AFDN-204ENST00000366809 BECN1Q14457 450 aa12.79□□□□□ -0.36
AFDN-204ENST00000366809 GRIN2AQ12879 1464 aa12.79□□□□□ -0.36
AFDN-204ENST00000366809 CCNB3Q8WWL7 1395 aa12.79□□□□□ -0.36
AFDN-204ENST00000366809 PPM1GO15355 546 aaPredicted RBP12.77□□□□□ -0.36
AFDN-204ENST00000366809 ERICH3Q5RHP9 1530 aa12.76□□□□□ -0.37
AFDN-204ENST00000366809 HDGFP51858 240 aaKnown RBP12.76□□□□□ -0.37
AFDN-204ENST00000366809 RGL3Q3MIN7 710 aa12.75□□□□□ -0.37
AFDN-204ENST00000366809 FAM9BQ8IZU0 186 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms