RNA–Protein interactions for RNA: ENST00000366686.1

CCSAP-202, Transcript of centriole, cilia and spindle associated protein, humanhuman

TSL 2 BASIC

Gene CCSAP, Length 4,399 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSAP-202ENST00000366686 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.55□□□□□ -1.68
CCSAP-202ENST00000366686 GTPBP6O43824 516 aaPredicted RBP4.54□□□□□ -1.68
CCSAP-202ENST00000366686 U3KPZ7 1027 aaPredicted RBP4.54□□□□□ -1.68
CCSAP-202ENST00000366686 SPOCK2Q92563 424 aa4.54□□□□□ -1.68
CCSAP-202ENST00000366686 WDR62O43379 1518 aa4.54□□□□□ -1.68
CCSAP-202ENST00000366686 ECM2O94769 699 aaPredicted RBP4.53□□□□□ -1.68
CCSAP-202ENST00000366686 NBR1Q14596 966 aa4.52□□□□□ -1.69
CCSAP-202ENST00000366686 DCAF8L1A6NGE4 600 aa4.51□□□□□ -1.69
CCSAP-202ENST00000366686 C1orf115Q9H7X2 142 aa4.51□□□□□ -1.69
CCSAP-202ENST00000366686 KIF21AQ7Z4S6 1674 aa4.51□□□□□ -1.69
CCSAP-202ENST00000366686 RNF25Q96BH1 459 aaPredicted RBP4.51□□□□□ -1.69
CCSAP-202ENST00000366686 NPM2Q86SE8 214 aaKnown RBP4.5□□□□□ -1.69
CCSAP-202ENST00000366686 LAMC3Q9Y6N6 1575 aa4.5□□□□□ -1.69
CCSAP-202ENST00000366686 SHROOM2Q13796 1616 aa4.5□□□□□ -1.69
CCSAP-202ENST00000366686 SAMD1Q6SPF0 538 aaPredicted RBP4.5□□□□□ -1.69
CCSAP-202ENST00000366686 SUPT5HO00267 1087 aaKnown RBP4.47□□□□□ -1.69
CCSAP-202ENST00000366686 SMARCA4P51532 1647 aa4.46□□□□□ -1.7
CCSAP-202ENST00000366686 DCAF8L2P0C7V8 631 aa4.46□□□□□ -1.7
CCSAP-202ENST00000366686 LOC105371045A0A1W2PR82 267 aa4.45□□□□□ -1.7
CCSAP-202ENST00000366686 LRRIQ1Q96JM4 1722 aa4.45□□□□□ -1.7
CCSAP-202ENST00000366686 SGIP1Q9BQI5 828 aa4.45□□□□□ -1.7
CCSAP-202ENST00000366686 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.44□□□□□ -1.7
CCSAP-202ENST00000366686 RANGAP1P46060 587 aaPredicted RBP4.44□□□□□ -1.7
CCSAP-202ENST00000366686 HNRNPUL2Q1KMD3 747 aaKnown RBP4.44□□□□□ -1.7
CCSAP-202ENST00000366686 NECTIN2Q92692 538 aa4.44□□□□□ -1.7
CCSAP-202ENST00000366686 NCAPD3P42695 1498 aa4.44□□□□□ -1.7
CCSAP-202ENST00000366686 ZC3H15Q8WU90 426 aaKnown RBP4.44□□□□□ -1.7
CCSAP-202ENST00000366686 ZMYND15Q9H091 742 aa4.43□□□□□ -1.7
CCSAP-202ENST00000366686 ZMYND10O75800 440 aa4.42□□□□□ -1.7
CCSAP-202ENST00000366686 LMOD2Q6P5Q4 547 aa4.42□□□□□ -1.7
CCSAP-202ENST00000366686 TARBP1Q13395 1621 aaKnown RBP4.41□□□□□ -1.7
CCSAP-202ENST00000366686 ABCC9O60706 1549 aa4.41□□□□□ -1.7
CCSAP-202ENST00000366686 CHGAP10645 457 aaKnown RBP4.4□□□□□ -1.7
CCSAP-202ENST00000366686 KCNV2Q8TDN2 545 aa4.4□□□□□ -1.7
CCSAP-202ENST00000366686 CLASP1Q7Z460 1538 aa4.4□□□□□ -1.71
CCSAP-202ENST00000366686 ONECUT3O60422 494 aaPredicted RBP4.4□□□□□ -1.71
CCSAP-202ENST00000366686 RGS22Q8NE09 1264 aa4.39□□□□□ -1.71
CCSAP-202ENST00000366686 TRIM41Q8WV44 630 aa4.39□□□□□ -1.71
CCSAP-202ENST00000366686 KIF13AQ9H1H9 1805 aa4.38□□□□□ -1.71
CCSAP-202ENST00000366686 CADPS2Q86UW7 1296 aa4.38□□□□□ -1.71
CCSAP-202ENST00000366686 BAZ1BQ9UIG0 1483 aaKnown RBP4.38□□□□□ -1.71
CCSAP-202ENST00000366686 TESPA1A2RU30 521 aaPredicted RBP4.37□□□□□ -1.71
CCSAP-202ENST00000366686 STAG3Q9UJ98 1225 aa4.37□□□□□ -1.71
CCSAP-202ENST00000366686 PPRC1Q5VV67 1664 aaKnown RBP4.36□□□□□ -1.71
CCSAP-202ENST00000366686 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.35□□□□□ -1.71
CCSAP-202ENST00000366686 RSPH6AQ9H0K4 717 aa4.35□□□□□ -1.71
CCSAP-202ENST00000366686 SLC24A3Q9HC58 644 aa4.35□□□□□ -1.71
CCSAP-202ENST00000366686 SSUH2Q9Y2M2 353 aa4.35□□□□□ -1.71
CCSAP-202ENST00000366686 CHRM1P11229 460 aaPredicted RBP4.34□□□□□ -1.71
CCSAP-202ENST00000366686 ARIH1Q9Y4X5 557 aaPredicted RBP4.34□□□□□ -1.71
CCSAP-202ENST00000366686 P3H3Q8IVL6 736 aa4.33□□□□□ -1.72
CCSAP-202ENST00000366686 BAZ1AQ9NRL2 1556 aaPredicted RBP4.33□□□□□ -1.72
CCSAP-202ENST00000366686 NUBP1P53384 320 aa4.33□□□□□ -1.72
CCSAP-202ENST00000366686 TRAIPQ9BWF2 469 aa4.33□□□□□ -1.72
CCSAP-202ENST00000366686 IGSF3O75054 1194 aa4.32□□□□□ -1.72
CCSAP-202ENST00000366686 BARGINQ6ZT62 677 aa4.32□□□□□ -1.72
CCSAP-202ENST00000366686 ABCA5Q8WWZ7 1642 aa4.31□□□□□ -1.72
CCSAP-202ENST00000366686 BIVM-ERCC5R4GMW8 1640 aa4.31□□□□□ -1.72
CCSAP-202ENST00000366686 POLA2Q14181 598 aa4.3□□□□□ -1.72
CCSAP-202ENST00000366686 RNF39Q9H2S5 420 aa4.3□□□□□ -1.72
CCSAP-202ENST00000366686 PBRM1Q86U86 1689 aa4.3□□□□□ -1.72
CCSAP-202ENST00000366686 ARHGEF1Q92888 912 aaKnown RBP4.3□□□□□ -1.72
CCSAP-202ENST00000366686 RIOK3O14730 519 aaKnown RBP4.29□□□□□ -1.72
CCSAP-202ENST00000366686 MKRN3Q13064 507 aaKnown RBP4.28□□□□□ -1.72
CCSAP-202ENST00000366686 NEUROD2Q15784 382 aa4.28□□□□□ -1.72
CCSAP-202ENST00000366686 C1QBPQ07021 282 aaKnown RBP4.28□□□□□ -1.73
CCSAP-202ENST00000366686 FNBP4Q8N3X1 1017 aaPredicted RBP4.27□□□□□ -1.73
CCSAP-202ENST00000366686 A6NJR5 290 aa4.27□□□□□ -1.73
CCSAP-202ENST00000366686 PLEKHG3A1L390 1219 aa4.27□□□□□ -1.73
CCSAP-202ENST00000366686 IGSF5Q9NSI5 407 aa4.27□□□□□ -1.73
CCSAP-202ENST00000366686 CHD1O14646 1710 aa4.26□□□□□ -1.73
CCSAP-202ENST00000366686 MNX1P50219 401 aaPredicted RBP4.26□□□□□ -1.73
CCSAP-202ENST00000366686 CCDC9Q9Y3X0 531 aaKnown RBP4.26□□□□□ -1.73
CCSAP-202ENST00000366686 NESP48681 1621 aa4.26□□□□□ -1.73
CCSAP-202ENST00000366686 GPR37O15354 613 aa4.25□□□□□ -1.73
CCSAP-202ENST00000366686 RIMBP3CA6NJZ7 1639 aa4.24□□□□□ -1.73
CCSAP-202ENST00000366686 RIMBP3BA6NNM3 1639 aa4.24□□□□□ -1.73
CCSAP-202ENST00000366686 RIMBP3Q9UFD9 1639 aa4.24□□□□□ -1.73
CCSAP-202ENST00000366686 VGFO15240 615 aaPredicted RBP4.23□□□□□ -1.73
CCSAP-202ENST00000366686 KDM4CQ9H3R0 1056 aa4.23□□□□□ -1.73
CCSAP-202ENST00000366686 GOPCQ9HD26 462 aa4.23□□□□□ -1.73
CCSAP-202ENST00000366686 SEMA3EO15041 775 aa4.22□□□□□ -1.73
CCSAP-202ENST00000366686 GPBP1L1Q9HC44 474 aaPredicted RBP4.22□□□□□ -1.73
CCSAP-202ENST00000366686 TRAK2O60296 914 aa4.21□□□□□ -1.73
CCSAP-202ENST00000366686 MFSD10Q14728 455 aa4.21□□□□□ -1.73
CCSAP-202ENST00000366686 CAMK2BQ13554 666 aa4.21□□□□□ -1.74
CCSAP-202ENST00000366686 GSE1Q14687 1217 aa4.21□□□□□ -1.74
CCSAP-202ENST00000366686 AK7Q96M32 723 aa4.21□□□□□ -1.74
CCSAP-202ENST00000366686 TRIM66O15016 1216 aa4.21□□□□□ -1.74
CCSAP-202ENST00000366686 TOP2BQ02880 1626 aa4.21□□□□□ -1.74
CCSAP-202ENST00000366686 BCORL1Q5H9F3 1711 aa4.2□□□□□ -1.74
CCSAP-202ENST00000366686 ATAD2BQ9ULI0 1458 aa4.2□□□□□ -1.74
CCSAP-202ENST00000366686 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.19□□□□□ -1.74
CCSAP-202ENST00000366686 ARID3CA6NKF2 412 aa4.19□□□□□ -1.74
CCSAP-202ENST00000366686 ZFP91Q96JP5 570 aaPredicted RBP4.19□□□□□ -1.74
CCSAP-202ENST00000366686 RYDENQ9NUL5 291 aaKnown RBP4.19□□□□□ -1.74
CCSAP-202ENST00000366686 PDIA4P13667 645 aaKnown RBP4.18□□□□□ -1.74
CCSAP-202ENST00000366686 NCKAP5LQ9HCH0 1330 aa4.18□□□□□ -1.74
CCSAP-202ENST00000366686 CCDC82Q8N4S0 544 aa4.18□□□□□ -1.74
CCSAP-202ENST00000366686 TOP2AP11388 1531 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms