RNA–Protein interactions for RNA: ENST00000361726.6

GJB1-201, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-201ENST00000361726 VPS8Q8N3P4 1428 aa22.18■■□□□ 1.14
GJB1-201ENST00000361726 GRIN2AQ12879 1464 aa22.18■■□□□ 1.14
GJB1-201ENST00000361726 SYNJ2O15056 1496 aa22.17■■□□□ 1.14
GJB1-201ENST00000361726 EFCAB5A4FU69 1503 aa22.13■■□□□ 1.13
GJB1-201ENST00000361726 IQGAP2Q13576 1575 aa22.13■■□□□ 1.13
GJB1-201ENST00000361726 SAMD9Q5K651 1589 aa22.1■■□□□ 1.13
GJB1-201ENST00000361726 CHD1O14646 1710 aa22.09■■□□□ 1.13
GJB1-201ENST00000361726 CEP170Q5SW79 1584 aa22.08■■□□□ 1.13
GJB1-201ENST00000361726 CHMP7Q8WUX9 453 aaPredicted RBP22.06■■□□□ 1.12
GJB1-201ENST00000361726 FBLN2P98095 1184 aa22.02■■□□□ 1.12
GJB1-201ENST00000361726 PPARGC1BQ86YN6 1023 aaKnown RBP22.02■■□□□ 1.12
GJB1-201ENST00000361726 FHOD3Q2V2M9 1422 aa22.02■■□□□ 1.12
GJB1-201ENST00000361726 KIAA0586Q9BVV6 1533 aa22.02■■□□□ 1.12
GJB1-201ENST00000361726 NUP160Q12769 1436 aa22■■□□□ 1.11
GJB1-201ENST00000361726 P3H3Q8IVL6 736 aa22■■□□□ 1.11
GJB1-201ENST00000361726 UGGT2Q9NYU1 1516 aa21.99■■□□□ 1.11
GJB1-201ENST00000361726 PCF11O94913 1555 aaKnown RBP21.97■■□□□ 1.11
GJB1-201ENST00000361726 KIAA0556O60303 1618 aa21.92■■□□□ 1.1
GJB1-201ENST00000361726 TRIM26Q12899 539 aaPredicted RBP21.91■■□□□ 1.1
GJB1-201ENST00000361726 PCGF6Q9BYE7 350 aa21.9■■□□□ 1.1
GJB1-201ENST00000361726 APLP2Q06481 763 aa21.89■■□□□ 1.09
GJB1-201ENST00000361726 TTBK1Q5TCY1 1321 aaPredicted RBP21.89■■□□□ 1.09
GJB1-201ENST00000361726 FMN1Q68DA7 1419 aa21.88■■□□□ 1.09
GJB1-201ENST00000361726 DISP1Q96F81 1524 aa21.88■■□□□ 1.09
GJB1-201ENST00000361726 FYCO1Q9BQS8 1478 aa21.87■■□□□ 1.09
GJB1-201ENST00000361726 CFAP43Q8NDM7 1665 aa21.87■■□□□ 1.09
GJB1-201ENST00000361726 CASKIN1Q8WXD9 1431 aa21.85■■□□□ 1.09
GJB1-201ENST00000361726 TIAM1Q13009 1591 aa21.84■■□□□ 1.09
GJB1-201ENST00000361726 LRRIQ1Q96JM4 1722 aa21.84■■□□□ 1.09
GJB1-201ENST00000361726 MAP3K1Q13233 1512 aa21.81■■□□□ 1.08
GJB1-201ENST00000361726 SHROOM2Q13796 1616 aa21.77■■□□□ 1.08
GJB1-201ENST00000361726 JPH4Q96JJ6 628 aa21.77■■□□□ 1.07
GJB1-201ENST00000361726 HECW1Q76N89 1606 aa21.75■■□□□ 1.07
GJB1-201ENST00000361726 CLASP1Q7Z460 1538 aa21.75■■□□□ 1.07
GJB1-201ENST00000361726 KANK4Q5T7N3 995 aaPredicted RBP21.74■■□□□ 1.07
GJB1-201ENST00000361726 CARMIL2Q6F5E8 1435 aa21.74■■□□□ 1.07
GJB1-201ENST00000361726 ATP1B4Q9UN42 357 aaPredicted RBP21.74■■□□□ 1.07
GJB1-201ENST00000361726 RAPGEF6Q8TEU7 1601 aa21.7■■□□□ 1.06
GJB1-201ENST00000361726 LRRC9Q6ZRR7 1453 aa21.7■■□□□ 1.06
GJB1-201ENST00000361726 PRG4Q92954 1404 aaPredicted RBP21.69■■□□□ 1.06
GJB1-201ENST00000361726 CCDC18Q5T9S5 1454 aa21.65■■□□□ 1.06
GJB1-201ENST00000361726 EPRSP07814 1512 aaKnown RBP21.62■■□□□ 1.05
GJB1-201ENST00000361726 ERCC6L2Q5T890 1561 aa21.62■■□□□ 1.05
GJB1-201ENST00000361726 CDK13Q14004 1512 aaKnown RBP21.61■■□□□ 1.05
GJB1-201ENST00000361726 NUP153P49790 1475 aaKnown RBP21.59■■□□□ 1.05
GJB1-201ENST00000361726 PLB1Q6P1J6 1458 aa21.59■■□□□ 1.05
GJB1-201ENST00000361726 ABCA8O94911 1581 aa21.58■■□□□ 1.05
GJB1-201ENST00000361726 EHBP1L1Q8N3D4 1523 aa21.57■■□□□ 1.04
GJB1-201ENST00000361726 MAGI3Q5TCQ9 1506 aa21.56■■□□□ 1.04
GJB1-201ENST00000361726 SUPT6HQ7KZ85 1726 aaKnown RBP21.54■■□□□ 1.04
GJB1-201ENST00000361726 MTUS2Q5JR59 1369 aa21.54■■□□□ 1.04
GJB1-201ENST00000361726 PTPRGP23470 1445 aa21.52■■□□□ 1.04
GJB1-201ENST00000361726 ARID3CA6NKF2 412 aa21.51■■□□□ 1.03
GJB1-201ENST00000361726 RRBP1Q9P2E9 1410 aaKnown RBP21.5■■□□□ 1.03
GJB1-201ENST00000361726 PHLDB1Q86UU1 1377 aa21.48■■□□□ 1.03
GJB1-201ENST00000361726 OSCARQ8IYS5 282 aa21.45■■□□□ 1.02
GJB1-201ENST00000361726 NCOA2Q15596 1464 aa21.45■■□□□ 1.02
GJB1-201ENST00000361726 CCNB3Q8WWL7 1395 aa21.43■■□□□ 1.02
GJB1-201ENST00000361726 ARHGEF11O15085 1522 aa21.42■■□□□ 1.02
GJB1-201ENST00000361726 UACAQ9BZF9 1416 aa21.41■■□□□ 1.02
GJB1-201ENST00000361726 ABCC2Q92887 1545 aa21.4■■□□□ 1.02
GJB1-201ENST00000361726 ATP10BO94823 1461 aa21.39■■□□□ 1.01
GJB1-201ENST00000361726 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.39■■□□□ 1.01
GJB1-201ENST00000361726 HNRNPUL2Q1KMD3 747 aaKnown RBP21.39■■□□□ 1.01
GJB1-201ENST00000361726 ADCY10Q96PN6 1610 aa21.38■■□□□ 1.01
GJB1-201ENST00000361726 TROQ12816 1431 aaPredicted RBP21.35■■□□□ 1.01
GJB1-201ENST00000361726 MYOM3Q5VTT5 1437 aa21.35■■□□□ 1.01
GJB1-201ENST00000361726 KIF14Q15058 1648 aa21.34■■□□□ 1.01
GJB1-201ENST00000361726 FGD6Q6ZV73 1430 aa21.34■■□□□ 1.01
GJB1-201ENST00000361726 CDK11AQ9UQ88 783 aaPredicted RBP21.34■■□□□ 1.01
GJB1-201ENST00000361726 UHRF1BP1LA0JNW5 1464 aa21.32■■□□□ 1
GJB1-201ENST00000361726 ZCCHC11Q5TAX3 1644 aaKnown RBP21.31■■□□□ 1
GJB1-201ENST00000361726 PTPN23Q9H3S7 1636 aa21.3■■□□□ 1
GJB1-201ENST00000361726 ITSN2Q9NZM3 1697 aa21.27■■□□□ 1
GJB1-201ENST00000361726 FAM50AQ14320 339 aaKnown RBP21.27■■□□□ 1
GJB1-201ENST00000361726 DNAJC5Q9H3Z4 198 aa21.26■□□□□ 0.99
GJB1-201ENST00000361726 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.25■□□□□ 0.99
GJB1-201ENST00000361726 KDM5BQ9UGL1 1544 aa21.24■□□□□ 0.99
GJB1-201ENST00000361726 CDC42BPAQ5VT25 1732 aa21.24■□□□□ 0.99
GJB1-201ENST00000361726 PLEKHD1A6NEE1 506 aa21.23■□□□□ 0.99
GJB1-201ENST00000361726 ITGAEP38570 1179 aa21.22■□□□□ 0.99
GJB1-201ENST00000361726 TCOF1Q13428 1488 aaKnown RBP21.21■□□□□ 0.99
GJB1-201ENST00000361726 MIA2Q96PC5 1412 aa21.21■□□□□ 0.99
GJB1-201ENST00000361726 HRCP23327 699 aa21.2■□□□□ 0.98
GJB1-201ENST00000361726 ABCC10Q5T3U5 1492 aa21.19■□□□□ 0.98
GJB1-201ENST00000361726 GPATCH8Q9UKJ3 1502 aaKnown RBP21.16■□□□□ 0.98
GJB1-201ENST00000361726 TTC37Q6PGP7 1564 aa21.14■□□□□ 0.98
GJB1-201ENST00000361726 RIMBP3CA6NJZ7 1639 aa21.14■□□□□ 0.97
GJB1-201ENST00000361726 RIMBP3BA6NNM3 1639 aa21.14■□□□□ 0.97
GJB1-201ENST00000361726 RIMBP3Q9UFD9 1639 aa21.14■□□□□ 0.97
GJB1-201ENST00000361726 PREX2Q70Z35 1606 aa21.13■□□□□ 0.97
GJB1-201ENST00000361726 CDC42BPBQ9Y5S2 1711 aa21.12■□□□□ 0.97
GJB1-201ENST00000361726 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.11■□□□□ 0.97
GJB1-201ENST00000361726 MYO5CQ9NQX4 1742 aa21.11■□□□□ 0.97
GJB1-201ENST00000361726 CAMSAP2Q08AD1 1489 aa21.1■□□□□ 0.97
GJB1-201ENST00000361726 DNMT1P26358 1616 aaKnown RBP21.1■□□□□ 0.97
GJB1-201ENST00000361726 PTPRKQ15262 1439 aa21.09■□□□□ 0.97
GJB1-201ENST00000361726 CCER1Q8TC90 406 aaPredicted RBP21.07■□□□□ 0.96
GJB1-201ENST00000361726 CFDP1Q9UEE9 299 aaPredicted RBP21.06■□□□□ 0.96
GJB1-201ENST00000361726 WDR7Q9Y4E6 1490 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms