RNA–Protein interactions for RNA: ENST00000361574.9

R3HDM4-201, Transcript of R3H domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene R3HDM4, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-201ENST00000361574 GAPVD1Q14C86 1478 aa34.71■■■■□ 3.15
R3HDM4-201ENST00000361574 HNRNPUL2Q1KMD3 747 aaKnown RBP34.67■■■■□ 3.14
R3HDM4-201ENST00000361574 CFAP43Q8NDM7 1665 aa34.66■■■■□ 3.14
R3HDM4-201ENST00000361574 AQRO60306 1485 aaKnown RBP eCLIP34.65■■■■□ 3.141e-7■■■■■ 33.5
R3HDM4-201ENST00000361574 MRC2Q9UBG0 1479 aa34.6■■■■□ 3.13
R3HDM4-201ENST00000361574 TDRD9Q8NDG6 1382 aaKnown RBP34.59■■■■□ 3.13
R3HDM4-201ENST00000361574 PCF11O94913 1555 aaKnown RBP34.59■■■■□ 3.13
R3HDM4-201ENST00000361574 LRRC9Q6ZRR7 1453 aa34.57■■■■□ 3.12
R3HDM4-201ENST00000361574 FYCO1Q9BQS8 1478 aa34.57■■■■□ 3.12
R3HDM4-201ENST00000361574 SAMD9Q5K651 1589 aa34.53■■■■□ 3.12
R3HDM4-201ENST00000361574 CCNB3Q8WWL7 1395 aa34.53■■■■□ 3.12
R3HDM4-201ENST00000361574 CASKIN1Q8WXD9 1431 aa34.52■■■■□ 3.12
R3HDM4-201ENST00000361574 PBRM1Q86U86 1689 aa34.5■■■■□ 3.11
R3HDM4-201ENST00000361574 CLSPNQ9HAW4 1339 aa34.47■■■■□ 3.11
R3HDM4-201ENST00000361574 FHOD3Q2V2M9 1422 aa34.47■■■■□ 3.11
R3HDM4-201ENST00000361574 FMN1Q68DA7 1419 aa34.45■■■■□ 3.11
R3HDM4-201ENST00000361574 WDR62O43379 1518 aa34.42■■■■□ 3.1
R3HDM4-201ENST00000361574 SNAPC4Q5SXM2 1469 aa34.37■■■■□ 3.09
R3HDM4-201ENST00000361574 ADAMTS12P58397 1594 aa34.36■■■■□ 3.09
R3HDM4-201ENST00000361574 IFT140Q96RY7 1462 aa34.34■■■■□ 3.09
R3HDM4-201ENST00000361574 THOC2Q8NI27 1593 aaKnown RBP34.32■■■■□ 3.09
R3HDM4-201ENST00000361574 DHX57Q6P158 1386 aaKnown RBP34.31■■■■□ 3.08
R3HDM4-201ENST00000361574 GRIN2BQ13224 1484 aa34.3■■■■□ 3.08
R3HDM4-201ENST00000361574 P3H3Q8IVL6 736 aa34.28■■■■□ 3.08
R3HDM4-201ENST00000361574 PHLDB1Q86UU1 1377 aa34.27■■■■□ 3.08
R3HDM4-201ENST00000361574 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.24■■■■□ 3.071e-6■■■■□ 20.2
R3HDM4-201ENST00000361574 IQGAP2Q13576 1575 aa34.19■■■■□ 3.06
R3HDM4-201ENST00000361574 LRRIQ1Q96JM4 1722 aa34.16■■■■□ 3.06
R3HDM4-201ENST00000361574 ZNF316A6NFI3 1004 aaPredicted RBP34.13■■■■□ 3.05
R3HDM4-201ENST00000361574 UGGT2Q9NYU1 1516 aa34.09■■■■□ 3.05
R3HDM4-201ENST00000361574 ZNF608Q9ULD9 1512 aaPredicted RBP34.09■■■■□ 3.05
R3HDM4-201ENST00000361574 DIEXFQ68CQ4 756 aaKnown RBP34.06■■■■□ 3.04
R3HDM4-201ENST00000361574 SETD5Q9C0A6 1442 aa34.04■■■■□ 3.04
R3HDM4-201ENST00000361574 CCDC18Q5T9S5 1454 aa34.04■■■■□ 3.04
R3HDM4-201ENST00000361574 EIF4G3O43432 1585 aaKnown RBP34.02■■■■□ 3.04
R3HDM4-201ENST00000361574 EHBP1L1Q8N3D4 1523 aa34.02■■■■□ 3.04
R3HDM4-201ENST00000361574 RAB3GAP2Q9H2M9 1393 aa34.02■■■■□ 3.04
R3HDM4-201ENST00000361574 ATP1B4Q9UN42 357 aaPredicted RBP34.01■■■■□ 3.03
R3HDM4-201ENST00000361574 HECW1Q76N89 1606 aa34■■■■□ 3.03
R3HDM4-201ENST00000361574 FGD6Q6ZV73 1430 aa33.99■■■■□ 3.03
R3HDM4-201ENST00000361574 SUPT6HQ7KZ85 1726 aaKnown RBP33.97■■■■□ 3.03
R3HDM4-201ENST00000361574 MTUS2Q5JR59 1369 aa33.97■■■■□ 3.03
R3HDM4-201ENST00000361574 ERCC6Q03468 1493 aa33.97■■■■□ 3.03
R3HDM4-201ENST00000361574 KIAA0586Q9BVV6 1533 aa33.97■■■■□ 3.03
R3HDM4-201ENST00000361574 ARHGEF11O15085 1522 aa33.95■■■■□ 3.03
R3HDM4-201ENST00000361574 MAGI1Q96QZ7 1491 aaPredicted RBP33.92■■■■□ 3.02
R3HDM4-201ENST00000361574 GRIN2AQ12879 1464 aa33.91■■■■□ 3.02
R3HDM4-201ENST00000361574 NCOA2Q15596 1464 aa33.9■■■■□ 3.02
R3HDM4-201ENST00000361574 MAPKBP1O60336 1514 aa33.88■■■■□ 3.01
R3HDM4-201ENST00000361574 ITGAEP38570 1179 aa33.88■■■■□ 3.01
R3HDM4-201ENST00000361574 FAM50AQ14320 339 aaKnown RBP33.88■■■■□ 3.01
R3HDM4-201ENST00000361574 MYOM3Q5VTT5 1437 aa33.87■■■■□ 3.01
R3HDM4-201ENST00000361574 KIAA0556O60303 1618 aa33.84■■■■□ 3.01
R3HDM4-201ENST00000361574 EPRSP07814 1512 aaKnown RBP33.83■■■■□ 3.01
R3HDM4-201ENST00000361574 MAGI3Q5TCQ9 1506 aa33.83■■■■□ 3.01
R3HDM4-201ENST00000361574 DISP1Q96F81 1524 aa33.81■■■■□ 3
R3HDM4-201ENST00000361574 SYNJ2O15056 1496 aa33.77■■■■□ 3
R3HDM4-201ENST00000361574 TCOF1Q13428 1488 aaKnown RBP33.74■■■□□ 2.99
R3HDM4-201ENST00000361574 PTPN23Q9H3S7 1636 aa33.72■■■□□ 2.99
R3HDM4-201ENST00000361574 HFM1A2PYH4 1435 aa33.7■■■□□ 2.99
R3HDM4-201ENST00000361574 CEP170Q5SW79 1584 aa33.67■■■□□ 2.98
R3HDM4-201ENST00000361574 NUP160Q12769 1436 aa33.64■■■□□ 2.98
R3HDM4-201ENST00000361574 PTPRKQ15262 1439 aa33.64■■■□□ 2.98
R3HDM4-201ENST00000361574 MIA2Q96PC5 1412 aa33.64■■■□□ 2.98
R3HDM4-201ENST00000361574 CDK13Q14004 1512 aaKnown RBP33.63■■■□□ 2.97
R3HDM4-201ENST00000361574 RAPGEF6Q8TEU7 1601 aa33.63■■■□□ 2.97
R3HDM4-201ENST00000361574 TIMELESSQ9UNS1 1208 aa33.59■■■□□ 2.97
R3HDM4-201ENST00000361574 NUP153P49790 1475 aaKnown RBP33.58■■■□□ 2.97
R3HDM4-201ENST00000361574 AKNAQ7Z591 1439 aa33.57■■■□□ 2.96
R3HDM4-201ENST00000361574 NAIPQ13075 1403 aa33.55■■■□□ 2.96
R3HDM4-201ENST00000361574 UACAQ9BZF9 1416 aa33.52■■■□□ 2.96
R3HDM4-201ENST00000361574 CHMP7Q8WUX9 453 aaPredicted RBP33.52■■■□□ 2.96
R3HDM4-201ENST00000361574 GCC2Q8IWJ2 1684 aa33.51■■■□□ 2.96
R3HDM4-201ENST00000361574 CARMIL2Q6F5E8 1435 aa33.44■■■□□ 2.94
R3HDM4-201ENST00000361574 ACIN1Q9UKV3 1341 aaKnown RBP33.38■■■□□ 2.93
R3HDM4-201ENST00000361574 ADCY10Q96PN6 1610 aa33.38■■■□□ 2.93
R3HDM4-201ENST00000361574 CDK11AQ9UQ88 783 aaPredicted RBP33.37■■■□□ 2.93
R3HDM4-201ENST00000361574 CENPBP07199 599 aaPredicted RBP33.36■■■□□ 2.93
R3HDM4-201ENST00000361574 MIER1Q8N108 512 aa33.36■■■□□ 2.93
R3HDM4-201ENST00000361574 TROQ12816 1431 aaPredicted RBP33.34■■■□□ 2.93
R3HDM4-201ENST00000361574 JPH4Q96JJ6 628 aa33.33■■■□□ 2.93
R3HDM4-201ENST00000361574 DNMT1P26358 1616 aaKnown RBP33.32■■■□□ 2.92
R3HDM4-201ENST00000361574 SIN3AQ96ST3 1273 aa33.31■■■□□ 2.92
R3HDM4-201ENST00000361574 ABCA8O94911 1581 aa33.3■■■□□ 2.92
R3HDM4-201ENST00000361574 PLB1Q6P1J6 1458 aa33.29■■■□□ 2.92
R3HDM4-201ENST00000361574 ROCK1Q13464 1354 aa33.29■■■□□ 2.92
R3HDM4-201ENST00000361574 ITSN2Q9NZM3 1697 aa33.28■■■□□ 2.92
R3HDM4-201ENST00000361574 SCAF1Q9H7N4 1312 aaKnown RBP33.26■■■□□ 2.91
R3HDM4-201ENST00000361574 DAPK1P53355 1430 aa33.24■■■□□ 2.91
R3HDM4-201ENST00000361574 NEUROD1Q13562 356 aa33.23■■■□□ 2.91
R3HDM4-201ENST00000361574 FBLN2P98095 1184 aa33.22■■■□□ 2.91
R3HDM4-201ENST00000361574 PPP1R15AO75807 674 aaPredicted RBP33.21■■■□□ 2.91
R3HDM4-201ENST00000361574 PRG4Q92954 1404 aaPredicted RBP33.18■■■□□ 2.9
R3HDM4-201ENST00000361574 ABCC5O15440 1437 aa33.17■■■□□ 2.9
R3HDM4-201ENST00000361574 KDM6BO15054 1643 aa33.16■■■□□ 2.9
R3HDM4-201ENST00000361574 ARID3CA6NKF2 412 aa33.16■■■□□ 2.9
R3HDM4-201ENST00000361574 GPATCH8Q9UKJ3 1502 aaKnown RBP33.14■■■□□ 2.9
R3HDM4-201ENST00000361574 DENND4BO75064 1496 aaPredicted RBP33.13■■■□□ 2.89
R3HDM4-201ENST00000361574 KIF14Q15058 1648 aa33.13■■■□□ 2.89
R3HDM4-201ENST00000361574 RRP7BPQ9NSQ0 103 aa33.12■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms