RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 TNIKQ9UKE5 1360 aa27.43■■□□□ 1.98
LMNA-202ENST00000361308 CEP170Q5SW79 1584 aa27.4■■□□□ 1.98
LMNA-202ENST00000361308 KIAA0586Q9BVV6 1533 aa27.38■■□□□ 1.97
LMNA-202ENST00000361308 RANGAP1P46060 587 aaPredicted RBP27.33■■□□□ 1.97
LMNA-202ENST00000361308 CTTNBP2Q8WZ74 1663 aa27.33■■□□□ 1.97
LMNA-202ENST00000361308 IQGAP2Q13576 1575 aa27.28■■□□□ 1.96
LMNA-202ENST00000361308 JPH4Q96JJ6 628 aa27.27■■□□□ 1.96
LMNA-202ENST00000361308 CLASP1Q7Z460 1538 aa27.23■■□□□ 1.95
LMNA-202ENST00000361308 CEP162Q5TB80 1403 aa27.2■■□□□ 1.94
LMNA-202ENST00000361308 CLIP1P30622 1438 aa27.17■■□□□ 1.94
LMNA-202ENST00000361308 UGGT2Q9NYU1 1516 aa27.15■■□□□ 1.94
LMNA-202ENST00000361308 P3H3Q8IVL6 736 aa27.12■■□□□ 1.93
LMNA-202ENST00000361308 PRG4Q92954 1404 aaPredicted RBP27.11■■□□□ 1.93
LMNA-202ENST00000361308 CARMIL2Q6F5E8 1435 aa27.09■■□□□ 1.93
LMNA-202ENST00000361308 SHROOM2Q13796 1616 aa27.09■■□□□ 1.93
LMNA-202ENST00000361308 ARHGAP35Q9NRY4 1499 aa27.08■■□□□ 1.93
LMNA-202ENST00000361308 EFCAB5A4FU69 1503 aa27.07■■□□□ 1.92
LMNA-202ENST00000361308 DISP1Q96F81 1524 aa27.05■■□□□ 1.92
LMNA-202ENST00000361308 SAMD9Q5K651 1589 aa27.03■■□□□ 1.92
LMNA-202ENST00000361308 KIAA0556O60303 1618 aa27■■□□□ 1.91
LMNA-202ENST00000361308 FHOD3Q2V2M9 1422 aa26.99■■□□□ 1.91
LMNA-202ENST00000361308 TTBK1Q5TCY1 1321 aaPredicted RBP26.96■■□□□ 1.91
LMNA-202ENST00000361308 ARAP1Q96P48 1450 aa26.96■■□□□ 1.91
LMNA-202ENST00000361308 ERCC6L2Q5T890 1561 aa26.96■■□□□ 1.91
LMNA-202ENST00000361308 PTPRGP23470 1445 aa26.9■■□□□ 1.9
LMNA-202ENST00000361308 FMN1Q68DA7 1419 aa26.88■■□□□ 1.89
LMNA-202ENST00000361308 ARHGEF11O15085 1522 aa26.88■■□□□ 1.89
LMNA-202ENST00000361308 VPS8Q8N3P4 1428 aa26.82■■□□□ 1.88
LMNA-202ENST00000361308 ATP1B4Q9UN42 357 aaPredicted RBP26.78■■□□□ 1.88
LMNA-202ENST00000361308 RIMBP3CA6NJZ7 1639 aa26.78■■□□□ 1.88
LMNA-202ENST00000361308 RIMBP3BA6NNM3 1639 aa26.78■■□□□ 1.88
LMNA-202ENST00000361308 RIMBP3Q9UFD9 1639 aa26.78■■□□□ 1.88
LMNA-202ENST00000361308 DNAJC5Q9H3Z4 198 aa26.76■■□□□ 1.88
LMNA-202ENST00000361308 PLB1Q6P1J6 1458 aa26.73■■□□□ 1.87
LMNA-202ENST00000361308 CYB5RLQ6IPT4 315 aa26.72■■□□□ 1.87
LMNA-202ENST00000361308 CASKIN1Q8WXD9 1431 aa26.72■■□□□ 1.87
LMNA-202ENST00000361308 UACAQ9BZF9 1416 aa26.71■■□□□ 1.87
LMNA-202ENST00000361308 ABCA8O94911 1581 aa26.67■■□□□ 1.86
LMNA-202ENST00000361308 RAPGEF6Q8TEU7 1601 aa26.67■■□□□ 1.86
LMNA-202ENST00000361308 PCF11O94913 1555 aaKnown RBP26.66■■□□□ 1.86
LMNA-202ENST00000361308 FYCO1Q9BQS8 1478 aa26.66■■□□□ 1.86
LMNA-202ENST00000361308 APLP2Q06481 763 aa26.65■■□□□ 1.86
LMNA-202ENST00000361308 ARID3CA6NKF2 412 aa26.62■■□□□ 1.85
LMNA-202ENST00000361308 UHRF1BP1LA0JNW5 1464 aa26.6■■□□□ 1.85
LMNA-202ENST00000361308 ABCC2Q92887 1545 aa26.6■■□□□ 1.85
LMNA-202ENST00000361308 HECW1Q76N89 1606 aa26.6■■□□□ 1.85
LMNA-202ENST00000361308 NUP153P49790 1475 aaKnown RBP26.6■■□□□ 1.85
LMNA-202ENST00000361308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.59■■□□□ 1.85
LMNA-202ENST00000361308 HNRNPUL2Q1KMD3 747 aaKnown RBP26.59■■□□□ 1.85
LMNA-202ENST00000361308 EPRSP07814 1512 aaKnown RBP26.55■■□□□ 1.84
LMNA-202ENST00000361308 NPM1P06748 294 aaKnown RBP eCLIP26.53■■□□□ 1.84
LMNA-202ENST00000361308 ADCY10Q96PN6 1610 aa26.53■■□□□ 1.84
LMNA-202ENST00000361308 CCDC18Q5T9S5 1454 aa26.53■■□□□ 1.84
LMNA-202ENST00000361308 ATP10BO94823 1461 aa26.51■■□□□ 1.84
LMNA-202ENST00000361308 CDK11AQ9UQ88 783 aaPredicted RBP26.48■■□□□ 1.83
LMNA-202ENST00000361308 CDK13Q14004 1512 aaKnown RBP26.48■■□□□ 1.83
LMNA-202ENST00000361308 KDM5BQ9UGL1 1544 aa26.48■■□□□ 1.83
LMNA-202ENST00000361308 MAP3K1Q13233 1512 aa26.47■■□□□ 1.83
LMNA-202ENST00000361308 LRRIQ1Q96JM4 1722 aa26.46■■□□□ 1.83
LMNA-202ENST00000361308 TIAM1Q13009 1591 aa26.44■■□□□ 1.82
LMNA-202ENST00000361308 PLEKHD1A6NEE1 506 aa26.44■■□□□ 1.82
LMNA-202ENST00000361308 KANK4Q5T7N3 995 aaPredicted RBP26.42■■□□□ 1.82
LMNA-202ENST00000361308 PPARGC1BQ86YN6 1023 aaKnown RBP26.41■■□□□ 1.82
LMNA-202ENST00000361308 ZCCHC11Q5TAX3 1644 aaKnown RBP26.4■■□□□ 1.82
LMNA-202ENST00000361308 MTUS2Q5JR59 1369 aa26.39■■□□□ 1.81
LMNA-202ENST00000361308 CFAP43Q8NDM7 1665 aa26.38■■□□□ 1.81
LMNA-202ENST00000361308 LRRC9Q6ZRR7 1453 aa26.36■■□□□ 1.81
LMNA-202ENST00000361308 MAGI3Q5TCQ9 1506 aa26.31■■□□□ 1.8
LMNA-202ENST00000361308 TROQ12816 1431 aaPredicted RBP26.3■■□□□ 1.8
LMNA-202ENST00000361308 ASXL2Q76L83 1435 aa26.3■■□□□ 1.8
LMNA-202ENST00000361308 KCNH8Q96L42 1107 aa26.29■■□□□ 1.8
LMNA-202ENST00000361308 EHBP1L1Q8N3D4 1523 aa26.27■■□□□ 1.8
LMNA-202ENST00000361308 WDR7Q9Y4E6 1490 aa26.26■■□□□ 1.79
LMNA-202ENST00000361308 MAPKBP1O60336 1514 aa26.24■■□□□ 1.79
LMNA-202ENST00000361308 SUPT6HQ7KZ85 1726 aaKnown RBP26.17■■□□□ 1.78
LMNA-202ENST00000361308 NCOA2Q15596 1464 aa26.16■■□□□ 1.78
LMNA-202ENST00000361308 KIF14Q15058 1648 aa26.16■■□□□ 1.78
LMNA-202ENST00000361308 CCNB3Q8WWL7 1395 aa26.1■■□□□ 1.77
LMNA-202ENST00000361308 PHLDB1Q86UU1 1377 aa26.09■■□□□ 1.77
LMNA-202ENST00000361308 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.08■■□□□ 1.777e-7■■□□□ 11.7
LMNA-202ENST00000361308 ABCC10Q5T3U5 1492 aa26.08■■□□□ 1.77
LMNA-202ENST00000361308 FAM69CQ0P6D2 419 aa26.08■■□□□ 1.76
LMNA-202ENST00000361308 MYOM3Q5VTT5 1437 aa26.02■■□□□ 1.76
LMNA-202ENST00000361308 GPATCH8Q9UKJ3 1502 aaKnown RBP26.02■■□□□ 1.76
LMNA-202ENST00000361308 TTC37Q6PGP7 1564 aa26.02■■□□□ 1.76
LMNA-202ENST00000361308 ABCA9Q8IUA7 1624 aa26.01■■□□□ 1.75
LMNA-202ENST00000361308 CFDP1Q9UEE9 299 aaPredicted RBP26.01■■□□□ 1.75
LMNA-202ENST00000361308 DIP2BQ9P265 1576 aa26■■□□□ 1.75
LMNA-202ENST00000361308 GLI2P10070 1586 aa25.99■■□□□ 1.75
LMNA-202ENST00000361308 CD109Q6YHK3 1445 aa25.99■■□□□ 1.75
LMNA-202ENST00000361308 PLCH2O75038 1416 aa25.98■■□□□ 1.75
LMNA-202ENST00000361308 TRHP20396 242 aaPredicted RBP25.97■■□□□ 1.75
LMNA-202ENST00000361308 MIA2Q96PC5 1412 aa25.95■■□□□ 1.74
LMNA-202ENST00000361308 FGD6Q6ZV73 1430 aa25.94■■□□□ 1.74
LMNA-202ENST00000361308 ZNF777Q9ULD5 760 aaPredicted RBP25.94■■□□□ 1.74
LMNA-202ENST00000361308 CDC42BPAQ5VT25 1732 aa25.93■■□□□ 1.74
LMNA-202ENST00000361308 ITSN2Q9NZM3 1697 aa25.93■■□□□ 1.74
LMNA-202ENST00000361308 EFCAB2Q5VUJ9 269 aa25.93■■□□□ 1.74
LMNA-202ENST00000361308 MYO5CQ9NQX4 1742 aa25.93■■□□□ 1.74
LMNA-202ENST00000361308 ARHGAP5Q13017 1502 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms