RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 FHAD1B1AJZ9 1412 aa31.46■■■□□ 2.63
CBWD3-201ENST00000360171 SNAPC4Q5SXM2 1469 aa31.43■■■□□ 2.62
CBWD3-201ENST00000360171 ARAP1Q96P48 1450 aa31.38■■■□□ 2.61
CBWD3-201ENST00000360171 ARHGAP35Q9NRY4 1499 aa31.37■■■□□ 2.61
CBWD3-201ENST00000360171 VPS8Q8N3P4 1428 aa31.33■■■□□ 2.61
CBWD3-201ENST00000360171 MAGI1Q96QZ7 1491 aaPredicted RBP31.33■■■□□ 2.61
CBWD3-201ENST00000360171 GRIN2AQ12879 1464 aa31.23■■■□□ 2.59
CBWD3-201ENST00000360171 SYNJ2O15056 1496 aa31.21■■■□□ 2.59
CBWD3-201ENST00000360171 EFCAB5A4FU69 1503 aa31.18■■■□□ 2.58
CBWD3-201ENST00000360171 IQGAP2Q13576 1575 aa31.15■■■□□ 2.58
CBWD3-201ENST00000360171 SAMD9Q5K651 1589 aa31.14■■■□□ 2.57
CBWD3-201ENST00000360171 CEP170Q5SW79 1584 aa31.09■■■□□ 2.57
CBWD3-201ENST00000360171 CHMP7Q8WUX9 453 aaPredicted RBP31.08■■■□□ 2.57
CBWD3-201ENST00000360171 FHOD3Q2V2M9 1422 aa31.07■■■□□ 2.56
CBWD3-201ENST00000360171 P3H3Q8IVL6 736 aa31.06■■■□□ 2.56
CBWD3-201ENST00000360171 KIAA0586Q9BVV6 1533 aa31.04■■■□□ 2.56
CBWD3-201ENST00000360171 FBLN2P98095 1184 aa31.03■■■□□ 2.56
CBWD3-201ENST00000360171 CHD1O14646 1710 aa31.02■■■□□ 2.56
CBWD3-201ENST00000360171 NUP160Q12769 1436 aa30.99■■■□□ 2.55
CBWD3-201ENST00000360171 UGGT2Q9NYU1 1516 aa30.98■■■□□ 2.55
CBWD3-201ENST00000360171 PCF11O94913 1555 aaKnown RBP30.97■■■□□ 2.55
CBWD3-201ENST00000360171 TTBK1Q5TCY1 1321 aaPredicted RBP30.95■■■□□ 2.55
CBWD3-201ENST00000360171 APLP2Q06481 763 aa30.89■■■□□ 2.54
CBWD3-201ENST00000360171 KIAA0556O60303 1618 aa30.86■■■□□ 2.53
CBWD3-201ENST00000360171 DISP1Q96F81 1524 aa30.85■■■□□ 2.53
CBWD3-201ENST00000360171 FMN1Q68DA7 1419 aa30.85■■■□□ 2.53
CBWD3-201ENST00000360171 FYCO1Q9BQS8 1478 aa30.83■■■□□ 2.53
CBWD3-201ENST00000360171 CASKIN1Q8WXD9 1431 aa30.81■■■□□ 2.52
CBWD3-201ENST00000360171 TIAM1Q13009 1591 aa30.81■■■□□ 2.52
CBWD3-201ENST00000360171 CFAP43Q8NDM7 1665 aa30.8■■■□□ 2.52
CBWD3-201ENST00000360171 MAP3K1Q13233 1512 aa30.77■■■□□ 2.52
CBWD3-201ENST00000360171 LRRIQ1Q96JM4 1722 aa30.77■■■□□ 2.52
CBWD3-201ENST00000360171 KANK4Q5T7N3 995 aaPredicted RBP30.76■■■□□ 2.51
CBWD3-201ENST00000360171 CCER1Q8TC90 406 aaPredicted RBP30.73■■■□□ 2.51
CBWD3-201ENST00000360171 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.72■■■□□ 2.51
CBWD3-201ENST00000360171 JPH4Q96JJ6 628 aa30.7■■■□□ 2.51
CBWD3-201ENST00000360171 ATP1B4Q9UN42 357 aaPredicted RBP30.68■■■□□ 2.5
CBWD3-201ENST00000360171 SHROOM2Q13796 1616 aa30.64■■■□□ 2.5
CBWD3-201ENST00000360171 LRRC9Q6ZRR7 1453 aa30.63■■■□□ 2.49
CBWD3-201ENST00000360171 HECW1Q76N89 1606 aa30.62■■■□□ 2.49
CBWD3-201ENST00000360171 CARMIL2Q6F5E8 1435 aa30.61■■■□□ 2.49
CBWD3-201ENST00000360171 CLASP1Q7Z460 1538 aa30.6■■■□□ 2.49
CBWD3-201ENST00000360171 PRG4Q92954 1404 aaPredicted RBP30.55■■■□□ 2.48
CBWD3-201ENST00000360171 RAPGEF6Q8TEU7 1601 aa30.55■■■□□ 2.48
CBWD3-201ENST00000360171 CCDC18Q5T9S5 1454 aa30.49■■■□□ 2.47
CBWD3-201ENST00000360171 EPRSP07814 1512 aaKnown RBP30.49■■■□□ 2.47
CBWD3-201ENST00000360171 SCAF1Q9H7N4 1312 aaKnown RBP30.48■■■□□ 2.47
CBWD3-201ENST00000360171 ERCC6L2Q5T890 1561 aa30.47■■■□□ 2.47
CBWD3-201ENST00000360171 CDK13Q14004 1512 aaKnown RBP30.47■■■□□ 2.47
CBWD3-201ENST00000360171 NUP153P49790 1475 aaKnown RBP30.45■■■□□ 2.47
CBWD3-201ENST00000360171 PLB1Q6P1J6 1458 aa30.45■■■□□ 2.47
CBWD3-201ENST00000360171 MAGI3Q5TCQ9 1506 aa30.43■■■□□ 2.46
CBWD3-201ENST00000360171 PELP1Q8IZL8 1130 aaKnown RBP30.42■■■□□ 2.46
CBWD3-201ENST00000360171 ABCA8O94911 1581 aa30.4■■■□□ 2.46
CBWD3-201ENST00000360171 EHBP1L1Q8N3D4 1523 aa30.39■■■□□ 2.45
CBWD3-201ENST00000360171 RRBP1Q9P2E9 1410 aaKnown RBP30.38■■■□□ 2.45
CBWD3-201ENST00000360171 MTUS2Q5JR59 1369 aa30.37■■■□□ 2.45
CBWD3-201ENST00000360171 PHLDB1Q86UU1 1377 aa30.36■■■□□ 2.45
CBWD3-201ENST00000360171 ARID3CA6NKF2 412 aa30.36■■■□□ 2.45
CBWD3-201ENST00000360171 SUPT6HQ7KZ85 1726 aaKnown RBP30.33■■■□□ 2.45
CBWD3-201ENST00000360171 PTPRGP23470 1445 aa30.33■■■□□ 2.45
CBWD3-201ENST00000360171 DIEXFQ68CQ4 756 aaKnown RBP30.3■■■□□ 2.44
CBWD3-201ENST00000360171 CCNB3Q8WWL7 1395 aa30.27■■■□□ 2.44
CBWD3-201ENST00000360171 NCOA2Q15596 1464 aa30.26■■■□□ 2.43
CBWD3-201ENST00000360171 ACIN1Q9UKV3 1341 aaKnown RBP30.24■■■□□ 2.43
CBWD3-201ENST00000360171 ARHGEF11O15085 1522 aa30.24■■■□□ 2.43
CBWD3-201ENST00000360171 HNRNPUL2Q1KMD3 747 aaKnown RBP30.2■■■□□ 2.43
CBWD3-201ENST00000360171 OSCARQ8IYS5 282 aa30.19■■■□□ 2.42
CBWD3-201ENST00000360171 UACAQ9BZF9 1416 aa30.17■■■□□ 2.42
CBWD3-201ENST00000360171 ATP10BO94823 1461 aa30.17■■■□□ 2.42
CBWD3-201ENST00000360171 FGD6Q6ZV73 1430 aa30.13■■■□□ 2.41
CBWD3-201ENST00000360171 ABCC2Q92887 1545 aa30.13■■■□□ 2.41
CBWD3-201ENST00000360171 MYOM3Q5VTT5 1437 aa30.12■■■□□ 2.41
CBWD3-201ENST00000360171 TROQ12816 1431 aaPredicted RBP30.11■■■□□ 2.41
CBWD3-201ENST00000360171 CENPBP07199 599 aaPredicted RBP30.1■■■□□ 2.41
CBWD3-201ENST00000360171 ADCY10Q96PN6 1610 aa30.09■■■□□ 2.41
CBWD3-201ENST00000360171 ZNF316A6NFI3 1004 aaPredicted RBP30.09■■■□□ 2.41
CBWD3-201ENST00000360171 CDK11AQ9UQ88 783 aaPredicted RBP30.08■■■□□ 2.41
CBWD3-201ENST00000360171 KIF14Q15058 1648 aa30.07■■■□□ 2.4
CBWD3-201ENST00000360171 NEUROD1Q13562 356 aa30.07■■■□□ 2.4
CBWD3-201ENST00000360171 FAM50AQ14320 339 aaKnown RBP30.03■■■□□ 2.4
CBWD3-201ENST00000360171 PTPN23Q9H3S7 1636 aa30.03■■■□□ 2.4
CBWD3-201ENST00000360171 UHRF1BP1LA0JNW5 1464 aa30.01■■■□□ 2.4
CBWD3-201ENST00000360171 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.01■■■□□ 2.39
CBWD3-201ENST00000360171 ITGAEP38570 1179 aa29.98■■■□□ 2.39
CBWD3-201ENST00000360171 ZCCHC11Q5TAX3 1644 aaKnown RBP29.98■■■□□ 2.39
CBWD3-201ENST00000360171 PLEKHD1A6NEE1 506 aa29.95■■■□□ 2.38
CBWD3-201ENST00000360171 TCOF1Q13428 1488 aaKnown RBP29.94■■■□□ 2.38
CBWD3-201ENST00000360171 ITSN2Q9NZM3 1697 aa29.92■■■□□ 2.38
CBWD3-201ENST00000360171 MIA2Q96PC5 1412 aa29.92■■■□□ 2.38
CBWD3-201ENST00000360171 KDM5BQ9UGL1 1544 aa29.92■■■□□ 2.38
CBWD3-201ENST00000360171 CDC42BPAQ5VT25 1732 aa29.89■■■□□ 2.38
CBWD3-201ENST00000360171 ABCC10Q5T3U5 1492 aa29.89■■■□□ 2.38
CBWD3-201ENST00000360171 GPATCH8Q9UKJ3 1502 aaKnown RBP29.86■■■□□ 2.37
CBWD3-201ENST00000360171 CLSPNQ9HAW4 1339 aa29.82■■■□□ 2.36
CBWD3-201ENST00000360171 PTPRKQ15262 1439 aa29.82■■■□□ 2.36
CBWD3-201ENST00000360171 GTF3C3Q9Y5Q9 886 aa29.78■■■□□ 2.36
CBWD3-201ENST00000360171 TTC37Q6PGP7 1564 aa29.77■■■□□ 2.36
CBWD3-201ENST00000360171 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.75■■■□□ 2.35
CBWD3-201ENST00000360171 ZNF644Q9H582 1327 aaPredicted RBP29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms