RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 KIAA0586Q9BVV6 1533 aa28.8■■■□□ 2.2
FAM3D-201ENST00000358781 JPH4Q96JJ6 628 aa28.8■■■□□ 2.2
FAM3D-201ENST00000358781 PRG4Q92954 1404 aaPredicted RBP28.76■■■□□ 2.19
FAM3D-201ENST00000358781 RAPGEF2Q9Y4G8 1499 aa28.75■■■□□ 2.19
FAM3D-201ENST00000358781 CHIC1Q5VXU3 224 aa28.65■■■□□ 2.18
FAM3D-201ENST00000358781 PRXQ9BXM0 1461 aa28.64■■■□□ 2.18
FAM3D-201ENST00000358781 IQGAP2Q13576 1575 aa28.62■■■□□ 2.17
FAM3D-201ENST00000358781 EEA1Q15075 1411 aa28.59■■■□□ 2.17
FAM3D-201ENST00000358781 CSRNP3Q8WYN3 585 aa28.57■■■□□ 2.16
FAM3D-201ENST00000358781 CTTNBP2Q8WZ74 1663 aa28.5■■■□□ 2.15
FAM3D-201ENST00000358781 CARMIL2Q6F5E8 1435 aa28.49■■■□□ 2.15
FAM3D-201ENST00000358781 UGGT2Q9NYU1 1516 aa28.47■■■□□ 2.15
FAM3D-201ENST00000358781 FAM9AQ8IZU1 332 aaPredicted RBP28.43■■■□□ 2.14
FAM3D-201ENST00000358781 DISP1Q96F81 1524 aa28.43■■■□□ 2.14
FAM3D-201ENST00000358781 TNIKQ9UKE5 1360 aa28.41■■■□□ 2.14
FAM3D-201ENST00000358781 PTPRGP23470 1445 aa28.4■■■□□ 2.14
FAM3D-201ENST00000358781 TRHP20396 242 aaPredicted RBP28.4■■■□□ 2.14
FAM3D-201ENST00000358781 KIAA0556O60303 1618 aa28.35■■■□□ 2.13
FAM3D-201ENST00000358781 ADCY10Q96PN6 1610 aa28.35■■■□□ 2.13
FAM3D-201ENST00000358781 TTBK1Q5TCY1 1321 aaPredicted RBP28.32■■■□□ 2.12
FAM3D-201ENST00000358781 KIF21BO75037 1637 aa28.31■■■□□ 2.12
FAM3D-201ENST00000358781 GOLGA3Q08378 1498 aa28.3■■■□□ 2.12
FAM3D-201ENST00000358781 NPM1P06748 294 aaKnown RBP eCLIP28.25■■■□□ 2.11
FAM3D-201ENST00000358781 UACAQ9BZF9 1416 aa28.21■■■□□ 2.11
FAM3D-201ENST00000358781 UHRF1BP1LA0JNW5 1464 aa28.2■■■□□ 2.1
FAM3D-201ENST00000358781 MAPKBP1O60336 1514 aa28.19■■■□□ 2.1
FAM3D-201ENST00000358781 ABCC2Q92887 1545 aa28.17■■■□□ 2.1
FAM3D-201ENST00000358781 SAMD9Q5K651 1589 aa28.13■■■□□ 2.09
FAM3D-201ENST00000358781 KIF13AQ9H1H9 1805 aa28.09■■■□□ 2.09
FAM3D-201ENST00000358781 PLB1Q6P1J6 1458 aa28.08■■■□□ 2.09
FAM3D-201ENST00000358781 P3H3Q8IVL6 736 aa28.08■■■□□ 2.09
FAM3D-201ENST00000358781 ABCC10Q5T3U5 1492 aa28.07■■■□□ 2.08
FAM3D-201ENST00000358781 EHMT2Q96KQ7 1210 aa28.07■■■□□ 2.08
FAM3D-201ENST00000358781 KDM5BQ9UGL1 1544 aa28.06■■■□□ 2.08
FAM3D-201ENST00000358781 ABCA8O94911 1581 aa28.06■■■□□ 2.08
FAM3D-201ENST00000358781 UBTFP17480 764 aaKnown RBP28.05■■■□□ 2.08
FAM3D-201ENST00000358781 RANGAP1P46060 587 aaPredicted RBP28.04■■■□□ 2.08
FAM3D-201ENST00000358781 DIP2BQ9P265 1576 aa28.03■■■□□ 2.08
FAM3D-201ENST00000358781 ZCCHC11Q5TAX3 1644 aaKnown RBP28■■■□□ 2.07
FAM3D-201ENST00000358781 FAM69CQ0P6D2 419 aa28■■■□□ 2.07
FAM3D-201ENST00000358781 ASXL2Q76L83 1435 aa28■■■□□ 2.07
FAM3D-201ENST00000358781 EFCAB5A4FU69 1503 aa27.98■■■□□ 2.07
FAM3D-201ENST00000358781 FHOD3Q2V2M9 1422 aa27.95■■■□□ 2.06
FAM3D-201ENST00000358781 RAPGEF6Q8TEU7 1601 aa27.88■■■□□ 2.05
FAM3D-201ENST00000358781 GLI2P10070 1586 aa27.86■■■□□ 2.05
FAM3D-201ENST00000358781 WDR7Q9Y4E6 1490 aa27.84■■■□□ 2.05
FAM3D-201ENST00000358781 EPRSP07814 1512 aaKnown RBP27.84■■■□□ 2.05
FAM3D-201ENST00000358781 ARHGAP35Q9NRY4 1499 aa27.82■■■□□ 2.04
FAM3D-201ENST00000358781 ATP10BO94823 1461 aa27.82■■■□□ 2.04
FAM3D-201ENST00000358781 TSPOAP1O95153 1857 aa27.8■■■□□ 2.04
FAM3D-201ENST00000358781 ARID3CA6NKF2 412 aa27.8■■■□□ 2.04
FAM3D-201ENST00000358781 NUP153P49790 1475 aaKnown RBP27.78■■■□□ 2.04
FAM3D-201ENST00000358781 MAP3K4Q9Y6R4 1608 aa27.72■■■□□ 2.03
FAM3D-201ENST00000358781 FMN1Q68DA7 1419 aa27.71■■■□□ 2.03
FAM3D-201ENST00000358781 PPRC1Q5VV67 1664 aaKnown RBP27.7■■■□□ 2.03
FAM3D-201ENST00000358781 KCNH8Q96L42 1107 aa27.69■■■□□ 2.02
FAM3D-201ENST00000358781 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.67■■■□□ 2.02
FAM3D-201ENST00000358781 HNRNPUL2Q1KMD3 747 aaKnown RBP27.67■■■□□ 2.02
FAM3D-201ENST00000358781 CFAP43Q8NDM7 1665 aa27.62■■■□□ 2.01
FAM3D-201ENST00000358781 CLIP1P30622 1438 aa27.61■■■□□ 2.01
FAM3D-201ENST00000358781 HECW1Q76N89 1606 aa27.6■■■□□ 2.01
FAM3D-201ENST00000358781 KDM6BO15054 1643 aa27.6■■■□□ 2.01
FAM3D-201ENST00000358781 CD109Q6YHK3 1445 aa27.59■■■□□ 2.01
FAM3D-201ENST00000358781 TEX14Q8IWB6 1497 aa27.59■■■□□ 2.01
FAM3D-201ENST00000358781 CDK13Q14004 1512 aaKnown RBP27.57■■■□□ 2
FAM3D-201ENST00000358781 PLEKHD1A6NEE1 506 aa27.56■■■□□ 2
FAM3D-201ENST00000358781 ATP1B4Q9UN42 357 aaPredicted RBP27.56■■■□□ 2
FAM3D-201ENST00000358781 MAGI3Q5TCQ9 1506 aa27.55■■■□□ 2
FAM3D-201ENST00000358781 ABCA9Q8IUA7 1624 aa27.54■■■□□ 2
FAM3D-201ENST00000358781 CASKIN1Q8WXD9 1431 aa27.5■■□□□ 1.99
FAM3D-201ENST00000358781 PCF11O94913 1555 aaKnown RBP27.49■■□□□ 1.99
FAM3D-201ENST00000358781 LRRIQ1Q96JM4 1722 aa27.47■■□□□ 1.99
FAM3D-201ENST00000358781 CEP162Q5TB80 1403 aa27.47■■□□□ 1.99
FAM3D-201ENST00000358781 LOC105371045A0A1W2PR82 267 aa27.46■■□□□ 1.99
FAM3D-201ENST00000358781 COL17A1Q9UMD9 1497 aaPredicted RBP27.44■■□□□ 1.98
FAM3D-201ENST00000358781 FYCO1Q9BQS8 1478 aa27.43■■□□□ 1.98
FAM3D-201ENST00000358781 CDK11AQ9UQ88 783 aaPredicted RBP27.41■■□□□ 1.98
FAM3D-201ENST00000358781 CCDC18Q5T9S5 1454 aa27.4■■□□□ 1.98
FAM3D-201ENST00000358781 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.39■■□□□ 1.98
FAM3D-201ENST00000358781 TTC37Q6PGP7 1564 aa27.37■■□□□ 1.97
FAM3D-201ENST00000358781 TROQ12816 1431 aaPredicted RBP27.35■■□□□ 1.97
FAM3D-201ENST00000358781 PHLDB1Q86UU1 1377 aa27.33■■□□□ 1.97
FAM3D-201ENST00000358781 NEO1Q92859 1461 aa27.32■■□□□ 1.96
FAM3D-201ENST00000358781 ARAP3Q8WWN8 1544 aa27.32■■□□□ 1.96
FAM3D-201ENST00000358781 KIF14Q15058 1648 aa27.29■■□□□ 1.96
FAM3D-201ENST00000358781 FANCAO15360 1455 aa27.25■■□□□ 1.95
FAM3D-201ENST00000358781 CFAP74Q9C0B2 1584 aa27.24■■□□□ 1.95
FAM3D-201ENST00000358781 PLCH2O75038 1416 aa27.23■■□□□ 1.95
FAM3D-201ENST00000358781 MYO5CQ9NQX4 1742 aa27.22■■□□□ 1.95
FAM3D-201ENST00000358781 AKNAQ7Z591 1439 aa27.21■■□□□ 1.95
FAM3D-201ENST00000358781 RAPGEF3O95398 923 aa27.16■■□□□ 1.94
FAM3D-201ENST00000358781 FRMPD1Q5SYB0 1578 aa27.14■■□□□ 1.94
FAM3D-201ENST00000358781 VPS8Q8N3P4 1428 aa27.14■■□□□ 1.93
FAM3D-201ENST00000358781 DENND4BO75064 1496 aaPredicted RBP27.13■■□□□ 1.93
FAM3D-201ENST00000358781 EFCAB2Q5VUJ9 269 aa27.13■■□□□ 1.93
FAM3D-201ENST00000358781 ARHGAP5Q13017 1502 aa27.1■■□□□ 1.93
FAM3D-201ENST00000358781 MTUS2Q5JR59 1369 aa27.1■■□□□ 1.93
FAM3D-201ENST00000358781 RICTORQ6R327 1708 aa27.1■■□□□ 1.93
FAM3D-201ENST00000358781 ADGRL1O94910 1474 aa27.09■■□□□ 1.93
FAM3D-201ENST00000358781 CDC42BPBQ9Y5S2 1711 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms