RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 CEP170Q5SW79 1584 aa14.6□□□□□ -0.07
SMARCAL1-202ENST00000358207 WRNQ14191 1432 aaPredicted RBP eCLIP14.59□□□□□ -0.07
SMARCAL1-202ENST00000358207 CHIC1Q5VXU3 224 aa14.57□□□□□ -0.08
SMARCAL1-202ENST00000358207 RUSC2Q8N2Y8 1516 aa14.56□□□□□ -0.08
SMARCAL1-202ENST00000358207 FHAD1B1AJZ9 1412 aa14.56□□□□□ -0.08
SMARCAL1-202ENST00000358207 CENPBP07199 599 aaPredicted RBP14.53□□□□□ -0.08
SMARCAL1-202ENST00000358207 TDRD9Q8NDG6 1382 aaKnown RBP14.52□□□□□ -0.09
SMARCAL1-202ENST00000358207 EHMT2Q96KQ7 1210 aa14.51□□□□□ -0.09
SMARCAL1-202ENST00000358207 KIF13AQ9H1H9 1805 aa14.46□□□□□ -0.1
SMARCAL1-202ENST00000358207 ZEB1P37275 1124 aaPredicted RBP14.45□□□□□ -0.1
SMARCAL1-202ENST00000358207 MAPKBP1O60336 1514 aa14.42□□□□□ -0.1
SMARCAL1-202ENST00000358207 TRIM41Q8WV44 630 aa14.41□□□□□ -0.1
SMARCAL1-202ENST00000358207 ERCC6L2Q5T890 1561 aa14.39□□□□□ -0.11
SMARCAL1-202ENST00000358207 APLP2Q06481 763 aa14.37□□□□□ -0.11
SMARCAL1-202ENST00000358207 TRIM26Q12899 539 aaPredicted RBP14.36□□□□□ -0.11
SMARCAL1-202ENST00000358207 CHMP7Q8WUX9 453 aaPredicted RBP14.34□□□□□ -0.11
SMARCAL1-202ENST00000358207 KIAA0586Q9BVV6 1533 aa14.34□□□□□ -0.11
SMARCAL1-202ENST00000358207 ERICH6Q7L0X2 663 aa14.33□□□□□ -0.12
SMARCAL1-202ENST00000358207 LOC105371045A0A1W2PR82 267 aa14.32□□□□□ -0.12
SMARCAL1-202ENST00000358207 ADCY10Q96PN6 1610 aa14.31□□□□□ -0.12
SMARCAL1-202ENST00000358207 ANP32EQ9BTT0 268 aa14.31□□□□□ -0.12
SMARCAL1-202ENST00000358207 GLI2P10070 1586 aa14.3□□□□□ -0.12
SMARCAL1-202ENST00000358207 UHRF1BP1LA0JNW5 1464 aa14.29□□□□□ -0.12
SMARCAL1-202ENST00000358207 DIP2BQ9P265 1576 aa14.29□□□□□ -0.12
SMARCAL1-202ENST00000358207 CTTNBP2Q8WZ74 1663 aa14.28□□□□□ -0.12
SMARCAL1-202ENST00000358207 KIF27Q86VH2 1401 aa14.28□□□□□ -0.12
SMARCAL1-202ENST00000358207 UGGT2Q9NYU1 1516 aa14.26□□□□□ -0.13
SMARCAL1-202ENST00000358207 CSRNP3Q8WYN3 585 aa14.25□□□□□ -0.13
SMARCAL1-202ENST00000358207 IQGAP2Q13576 1575 aa14.24□□□□□ -0.13
SMARCAL1-202ENST00000358207 IGF1RP08069 1367 aa14.23□□□□□ -0.13
SMARCAL1-202ENST00000358207 ABCC10Q5T3U5 1492 aa14.22□□□□□ -0.13
SMARCAL1-202ENST00000358207 CYB5RLQ6IPT4 315 aa14.21□□□□□ -0.13
SMARCAL1-202ENST00000358207 PRG4Q92954 1404 aaPredicted RBP14.21□□□□□ -0.13
SMARCAL1-202ENST00000358207 PPRC1Q5VV67 1664 aaKnown RBP14.2□□□□□ -0.14
SMARCAL1-202ENST00000358207 MAP3K4Q9Y6R4 1608 aa14.17□□□□□ -0.14
SMARCAL1-202ENST00000358207 KIAA0556O60303 1618 aa14.16□□□□□ -0.14
SMARCAL1-202ENST00000358207 FBLN2P98095 1184 aa14.16□□□□□ -0.14
SMARCAL1-202ENST00000358207 ABCC2Q92887 1545 aa14.13□□□□□ -0.15
SMARCAL1-202ENST00000358207 DISP1Q96F81 1524 aa14.13□□□□□ -0.15
SMARCAL1-202ENST00000358207 KDM5BQ9UGL1 1544 aa14.11□□□□□ -0.15
SMARCAL1-202ENST00000358207 RAPGEF2Q9Y4G8 1499 aa14.1□□□□□ -0.15
SMARCAL1-202ENST00000358207 ZCCHC11Q5TAX3 1644 aaKnown RBP14.08□□□□□ -0.15
SMARCAL1-202ENST00000358207 CFAP43Q8NDM7 1665 aa14.08□□□□□ -0.16
SMARCAL1-202ENST00000358207 JPH4Q96JJ6 628 aa14.08□□□□□ -0.16
SMARCAL1-202ENST00000358207 ABCA8O94911 1581 aa14.07□□□□□ -0.16
SMARCAL1-202ENST00000358207 CARMIL1Q5VZK9 1371 aa14.07□□□□□ -0.16
SMARCAL1-202ENST00000358207 TNIKQ9UKE5 1360 aa14.07□□□□□ -0.16
SMARCAL1-202ENST00000358207 CARMIL2Q6F5E8 1435 aa14.06□□□□□ -0.16
SMARCAL1-202ENST00000358207 PLB1Q6P1J6 1458 aa14.06□□□□□ -0.16
SMARCAL1-202ENST00000358207 SAMD9Q5K651 1589 aa14.06□□□□□ -0.16
SMARCAL1-202ENST00000358207 DIEXFQ68CQ4 756 aaKnown RBP14.06□□□□□ -0.16
SMARCAL1-202ENST00000358207 PRXQ9BXM0 1461 aa14.06□□□□□ -0.16
SMARCAL1-202ENST00000358207 GOLGA3Q08378 1498 aa14.03□□□□□ -0.16
SMARCAL1-202ENST00000358207 KDM6BO15054 1643 aa14.02□□□□□ -0.16
SMARCAL1-202ENST00000358207 UACAQ9BZF9 1416 aa13.99□□□□□ -0.17
SMARCAL1-202ENST00000358207 EEA1Q15075 1411 aa13.97□□□□□ -0.17
SMARCAL1-202ENST00000358207 TSHZ2Q9NRE2 1034 aa13.96□□□□□ -0.17
SMARCAL1-202ENST00000358207 PTPRGP23470 1445 aa13.96□□□□□ -0.17
SMARCAL1-202ENST00000358207 EPRSP07814 1512 aaKnown RBP13.96□□□□□ -0.17
SMARCAL1-202ENST00000358207 MAGI3Q5TCQ9 1506 aa13.95□□□□□ -0.18
SMARCAL1-202ENST00000358207 KIF21BO75037 1637 aa13.95□□□□□ -0.18
SMARCAL1-202ENST00000358207 RANGAP1P46060 587 aaPredicted RBP13.94□□□□□ -0.18
SMARCAL1-202ENST00000358207 YTHDC1Q96MU7 727 aaKnown RBP13.94□□□□□ -0.18
SMARCAL1-202ENST00000358207 TEX14Q8IWB6 1497 aa13.94□□□□□ -0.18
SMARCAL1-202ENST00000358207 TRHP20396 242 aaPredicted RBP13.93□□□□□ -0.18
SMARCAL1-202ENST00000358207 ABCA9Q8IUA7 1624 aa13.93□□□□□ -0.18
SMARCAL1-202ENST00000358207 ASXL2Q76L83 1435 aa13.91□□□□□ -0.18
SMARCAL1-202ENST00000358207 ANO8Q9HCE9 1232 aaPredicted RBP13.9□□□□□ -0.18
SMARCAL1-202ENST00000358207 WDR7Q9Y4E6 1490 aa13.9□□□□□ -0.18
SMARCAL1-202ENST00000358207 TSPOAP1O95153 1857 aa13.89□□□□□ -0.19
SMARCAL1-202ENST00000358207 EFCAB5A4FU69 1503 aa13.89□□□□□ -0.19
SMARCAL1-202ENST00000358207 RAPGEF6Q8TEU7 1601 aa13.86□□□□□ -0.19
SMARCAL1-202ENST00000358207 CFAP74Q9C0B2 1584 aa13.86□□□□□ -0.19
SMARCAL1-202ENST00000358207 ARAP3Q8WWN8 1544 aa13.85□□□□□ -0.19
SMARCAL1-202ENST00000358207 PHLDB1Q86UU1 1377 aa13.83□□□□□ -0.2
SMARCAL1-202ENST00000358207 UBTFP17480 764 aaKnown RBP13.81□□□□□ -0.2
SMARCAL1-202ENST00000358207 NPM1P06748 294 aaKnown RBP eCLIP13.81□□□□□ -0.2
SMARCAL1-202ENST00000358207 SUPT16HQ9Y5B9 1047 aaKnown RBP13.79□□□□□ -0.2
SMARCAL1-202ENST00000358207 NEO1Q92859 1461 aa13.76□□□□□ -0.21
SMARCAL1-202ENST00000358207 FRMPD1Q5SYB0 1578 aa13.76□□□□□ -0.21
SMARCAL1-202ENST00000358207 ZMYM4Q5VZL5 1548 aa13.76□□□□□ -0.21
SMARCAL1-202ENST00000358207 FAM69CQ0P6D2 419 aa13.75□□□□□ -0.21
SMARCAL1-202ENST00000358207 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.75□□□□□ -0.21
SMARCAL1-202ENST00000358207 RICTORQ6R327 1708 aa13.75□□□□□ -0.21
SMARCAL1-202ENST00000358207 ADAMTSL3P82987 1691 aa13.74□□□□□ -0.21
SMARCAL1-202ENST00000358207 ATP10BO94823 1461 aa13.71□□□□□ -0.21
SMARCAL1-202ENST00000358207 COL17A1Q9UMD9 1497 aaPredicted RBP13.71□□□□□ -0.21
SMARCAL1-202ENST00000358207 ARHGEF40Q8TER5 1519 aa13.69□□□□□ -0.22
SMARCAL1-202ENST00000358207 MIER1Q8N108 512 aa13.69□□□□□ -0.22
SMARCAL1-202ENST00000358207 NUP153P49790 1475 aaKnown RBP13.68□□□□□ -0.22
SMARCAL1-202ENST00000358207 ADGRL1O94910 1474 aa13.67□□□□□ -0.22
SMARCAL1-202ENST00000358207 BCORL1Q5H9F3 1711 aa13.67□□□□□ -0.22
SMARCAL1-202ENST00000358207 HECW1Q76N89 1606 aa13.67□□□□□ -0.22
SMARCAL1-202ENST00000358207 CCER1Q8TC90 406 aaPredicted RBP13.66□□□□□ -0.22
SMARCAL1-202ENST00000358207 REREQ9P2R6 1566 aa13.66□□□□□ -0.22
SMARCAL1-202ENST00000358207 LRRIQ1Q96JM4 1722 aa13.64□□□□□ -0.23
SMARCAL1-202ENST00000358207 CD109Q6YHK3 1445 aa13.64□□□□□ -0.23
SMARCAL1-202ENST00000358207 SALL2Q9Y467 1007 aaPredicted RBP13.64□□□□□ -0.23
SMARCAL1-202ENST00000358207 UBE2Q2Q8WVN8 375 aa13.63□□□□□ -0.23
SMARCAL1-202ENST00000358207 MYO5CQ9NQX4 1742 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms