RNA–Protein interactions for RNA: ENST00000357881.8

RFX4-202, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 2,565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-202ENST00000357881 UBE2Q2Q8WVN8 375 aa13.43□□□□□ -0.26
RFX4-202ENST00000357881 RTN4Q9NQC3 1192 aaKnown RBP13.42□□□□□ -0.26
RFX4-202ENST00000357881 ERCC6L2Q5T890 1561 aa13.42□□□□□ -0.26
RFX4-202ENST00000357881 POLA1P09884 1462 aaPredicted RBP13.41□□□□□ -0.26
RFX4-202ENST00000357881 GRIN2BQ13224 1484 aa13.41□□□□□ -0.26
RFX4-202ENST00000357881 AQRO60306 1485 aaKnown RBP eCLIP13.4□□□□□ -0.26
RFX4-202ENST00000357881 SNAPC4Q5SXM2 1469 aa13.4□□□□□ -0.26
RFX4-202ENST00000357881 PBRM1Q86U86 1689 aa13.38□□□□□ -0.27
RFX4-202ENST00000357881 ANO8Q9HCE9 1232 aaPredicted RBP13.38□□□□□ -0.27
RFX4-202ENST00000357881 SHROOM2Q13796 1616 aa13.38□□□□□ -0.27
RFX4-202ENST00000357881 NEUROD1Q13562 356 aa13.37□□□□□ -0.27
RFX4-202ENST00000357881 ILDR1Q86SU0 546 aaPredicted RBP13.34□□□□□ -0.27
RFX4-202ENST00000357881 MAPKBP1O60336 1514 aa13.32□□□□□ -0.28
RFX4-202ENST00000357881 PODXL2Q9NZ53 605 aa13.3□□□□□ -0.28
RFX4-202ENST00000357881 SOGA1O94964 1423 aa13.3□□□□□ -0.28
RFX4-202ENST00000357881 CCDC88BA6NC98 1476 aa13.3□□□□□ -0.28
RFX4-202ENST00000357881 CHMP7Q8WUX9 453 aaPredicted RBP13.27□□□□□ -0.28
RFX4-202ENST00000357881 PCGF6Q9BYE7 350 aa13.27□□□□□ -0.28
RFX4-202ENST00000357881 ABCC10Q5T3U5 1492 aa13.26□□□□□ -0.29
RFX4-202ENST00000357881 ABCA5Q8WWZ7 1642 aa13.26□□□□□ -0.29
RFX4-202ENST00000357881 KDM6BO15054 1643 aa13.26□□□□□ -0.29
RFX4-202ENST00000357881 CEP170Q5SW79 1584 aa13.25□□□□□ -0.29
RFX4-202ENST00000357881 FBLN2P98095 1184 aa13.25□□□□□ -0.29
RFX4-202ENST00000357881 NUP160Q12769 1436 aa13.24□□□□□ -0.29
RFX4-202ENST00000357881 DIP2BQ9P265 1576 aa13.23□□□□□ -0.29
RFX4-202ENST00000357881 FGD5Q6ZNL6 1462 aa13.21□□□□□ -0.29
RFX4-202ENST00000357881 RAD54L2Q9Y4B4 1467 aa13.19□□□□□ -0.3
RFX4-202ENST00000357881 ABCA10Q8WWZ4 1543 aa13.19□□□□□ -0.3
RFX4-202ENST00000357881 GRIN2AQ12879 1464 aa13.19□□□□□ -0.3
RFX4-202ENST00000357881 ADAMTS12P58397 1594 aa13.18□□□□□ -0.3
RFX4-202ENST00000357881 TDRD9Q8NDG6 1382 aaKnown RBP13.16□□□□□ -0.3
RFX4-202ENST00000357881 PKNOX2Q96KN3 472 aa13.16□□□□□ -0.3
RFX4-202ENST00000357881 KDM4FA0A1W2PPD8 638 aa13.13□□□□□ -0.31
RFX4-202ENST00000357881 GLI2P10070 1586 aa13.13□□□□□ -0.31
RFX4-202ENST00000357881 NCBP3Q53F19 620 aaKnown RBP13.12□□□□□ -0.31
RFX4-202ENST00000357881 TOP2BQ02880 1626 aa13.11□□□□□ -0.31
RFX4-202ENST00000357881 HECW2Q9P2P5 1572 aa13.11□□□□□ -0.31
RFX4-202ENST00000357881 CUX1P39880 1505 aa13.1□□□□□ -0.31
RFX4-202ENST00000357881 ERICH3Q5RHP9 1530 aa13.09□□□□□ -0.31
RFX4-202ENST00000357881 ADRA2BP18089 450 aa13.09□□□□□ -0.31
RFX4-202ENST00000357881 FHAD1B1AJZ9 1412 aa13.08□□□□□ -0.32
RFX4-202ENST00000357881 FBXO41Q8TF61 875 aa13.08□□□□□ -0.32
RFX4-202ENST00000357881 ADGRL1O94910 1474 aa13.05□□□□□ -0.32
RFX4-202ENST00000357881 ZEB1P37275 1124 aaPredicted RBP13.04□□□□□ -0.32
RFX4-202ENST00000357881 NPM1P06748 294 aaKnown RBP eCLIP13.03□□□□□ -0.32
RFX4-202ENST00000357881 ADCY10Q96PN6 1610 aa13.03□□□□□ -0.32
RFX4-202ENST00000357881 SALL2Q9Y467 1007 aaPredicted RBP13.02□□□□□ -0.32
RFX4-202ENST00000357881 KLHL34Q8N239 644 aa13.01□□□□□ -0.33
RFX4-202ENST00000357881 RUSC2Q8N2Y8 1516 aa13□□□□□ -0.33
RFX4-202ENST00000357881 PPRC1Q5VV67 1664 aaKnown RBP13□□□□□ -0.33
RFX4-202ENST00000357881 FAM69CQ0P6D2 419 aa12.99□□□□□ -0.33
RFX4-202ENST00000357881 CCDC136Q96JN2 1154 aa12.99□□□□□ -0.33
RFX4-202ENST00000357881 KIAA0586Q9BVV6 1533 aa12.98□□□□□ -0.33
RFX4-202ENST00000357881 BIVM-ERCC5R4GMW8 1640 aa12.97□□□□□ -0.33
RFX4-202ENST00000357881 PRG4Q92954 1404 aaPredicted RBP12.97□□□□□ -0.33
RFX4-202ENST00000357881 TEX14Q8IWB6 1497 aa12.97□□□□□ -0.33
RFX4-202ENST00000357881 PLB1Q6P1J6 1458 aa12.96□□□□□ -0.34
RFX4-202ENST00000357881 TSPOAP1O95153 1857 aa12.95□□□□□ -0.34
RFX4-202ENST00000357881 SLC4A1APQ9BWU0 796 aaKnown RBP12.93□□□□□ -0.34
RFX4-202ENST00000357881 MAP3K4Q9Y6R4 1608 aa12.93□□□□□ -0.34
RFX4-202ENST00000357881 WRNQ14191 1432 aaPredicted RBP eCLIP12.92□□□□□ -0.34
RFX4-202ENST00000357881 UHRF1BP1LA0JNW5 1464 aa12.91□□□□□ -0.34
RFX4-202ENST00000357881 AMER1Q5JTC6 1135 aaPredicted RBP12.91□□□□□ -0.34
RFX4-202ENST00000357881 ARXQ96QS3 562 aa12.87□□□□□ -0.35
RFX4-202ENST00000357881 ABCC2Q92887 1545 aa12.86□□□□□ -0.35
RFX4-202ENST00000357881 JPH4Q96JJ6 628 aa12.85□□□□□ -0.35
RFX4-202ENST00000357881 RANGAP1P46060 587 aaPredicted RBP12.84□□□□□ -0.35
RFX4-202ENST00000357881 LMTK3Q96Q04 1460 aa12.84□□□□□ -0.35
RFX4-202ENST00000357881 CUL7Q14999 1698 aa12.83□□□□□ -0.36
RFX4-202ENST00000357881 PDIA4P13667 645 aaKnown RBP12.83□□□□□ -0.36
RFX4-202ENST00000357881 CFAP43Q8NDM7 1665 aa12.81□□□□□ -0.36
RFX4-202ENST00000357881 NEFLP07196 543 aa12.79□□□□□ -0.36
RFX4-202ENST00000357881 PDE4CQ08493 712 aa12.79□□□□□ -0.36
RFX4-202ENST00000357881 TSHZ2Q9NRE2 1034 aa12.79□□□□□ -0.36
RFX4-202ENST00000357881 SOCS7O14512 581 aa12.78□□□□□ -0.36
RFX4-202ENST00000357881 ERICH6BQ5W0A0 696 aa12.78□□□□□ -0.36
RFX4-202ENST00000357881 TIMELESSQ9UNS1 1208 aa12.77□□□□□ -0.36
RFX4-202ENST00000357881 MAGI3Q5TCQ9 1506 aa12.77□□□□□ -0.37
RFX4-202ENST00000357881 ADAMTSL3P82987 1691 aa12.77□□□□□ -0.37
RFX4-202ENST00000357881 EPRSP07814 1512 aaKnown RBP12.76□□□□□ -0.37
RFX4-202ENST00000357881 ASXL2Q76L83 1435 aa12.75□□□□□ -0.37
RFX4-202ENST00000357881 KDM5BQ9UGL1 1544 aa12.75□□□□□ -0.37
RFX4-202ENST00000357881 CARMIL2Q6F5E8 1435 aa12.74□□□□□ -0.37
RFX4-202ENST00000357881 PHLDB1Q86UU1 1377 aa12.73□□□□□ -0.37
RFX4-202ENST00000357881 TNIKQ9UKE5 1360 aa12.72□□□□□ -0.37
RFX4-202ENST00000357881 PCF11O94913 1555 aaKnown RBP12.71□□□□□ -0.37
RFX4-202ENST00000357881 PTPRGP23470 1445 aa12.71□□□□□ -0.38
RFX4-202ENST00000357881 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.71□□□□□ -0.38
RFX4-202ENST00000357881 ARAP3Q8WWN8 1544 aa12.69□□□□□ -0.38
RFX4-202ENST00000357881 COL17A1Q9UMD9 1497 aaPredicted RBP12.68□□□□□ -0.38
RFX4-202ENST00000357881 ZCCHC11Q5TAX3 1644 aaKnown RBP12.67□□□□□ -0.38
RFX4-202ENST00000357881 UACAQ9BZF9 1416 aa12.67□□□□□ -0.38
RFX4-202ENST00000357881 IQSEC2Q5JU85 1478 aa12.65□□□□□ -0.38
RFX4-202ENST00000357881 BCORL1Q5H9F3 1711 aa12.65□□□□□ -0.38
RFX4-202ENST00000357881 SPATA31D1Q6ZQQ2 1576 aa12.65□□□□□ -0.38
RFX4-202ENST00000357881 KIF21BO75037 1637 aa12.65□□□□□ -0.38
RFX4-202ENST00000357881 FGD1P98174 961 aa12.65□□□□□ -0.39
RFX4-202ENST00000357881 PTPRMP28827 1452 aa12.64□□□□□ -0.39
RFX4-202ENST00000357881 BCL11BQ9C0K0 894 aaPredicted RBP12.63□□□□□ -0.39
RFX4-202ENST00000357881 IQGAP2Q13576 1575 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms