RNA–Protein interactions for RNA: ENST00000357613.8

TMEM170A-201, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best) BASIC

Gene TMEM170A, Length 4,959 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-201ENST00000357613 CADPSQ9ULU8 1353 aa16.78■□□□□ 0.28
TMEM170A-201ENST00000357613 WRNQ14191 1432 aaPredicted RBP eCLIP16.78■□□□□ 0.28
TMEM170A-201ENST00000357613 RRP7BPQ9NSQ0 103 aa16.77■□□□□ 0.27
TMEM170A-201ENST00000357613 KCNH8Q96L42 1107 aa16.76■□□□□ 0.27
TMEM170A-201ENST00000357613 MTUS2Q5JR59 1369 aa16.75■□□□□ 0.27
TMEM170A-201ENST00000357613 PDS5BQ9NTI5 1447 aa16.75■□□□□ 0.27
TMEM170A-201ENST00000357613 FKBP8Q14318 412 aa16.75■□□□□ 0.27
TMEM170A-201ENST00000357613 NPM2Q86SE8 214 aaKnown RBP16.75■□□□□ 0.27
TMEM170A-201ENST00000357613 SENP3-EIF4A1A0A087X0R7 540 aa16.74■□□□□ 0.27
TMEM170A-201ENST00000357613 TSPY4P0CV99 314 aa16.74■□□□□ 0.27
TMEM170A-201ENST00000357613 TSPY10P0CW01 314 aa16.74■□□□□ 0.27
TMEM170A-201ENST00000357613 CLIP1P30622 1438 aa16.7■□□□□ 0.26
TMEM170A-201ENST00000357613 PLEKHG5O94827 1062 aa16.7■□□□□ 0.26
TMEM170A-201ENST00000357613 HMGXB3Q12766 1538 aa16.64■□□□□ 0.25
TMEM170A-201ENST00000357613 TMC1Q8TDI8 760 aa16.64■□□□□ 0.25
TMEM170A-201ENST00000357613 RGL3Q3MIN7 710 aa16.63■□□□□ 0.25
TMEM170A-201ENST00000357613 MIER1Q8N108 512 aa16.63■□□□□ 0.25
TMEM170A-201ENST00000357613 IRX6P78412 446 aaPredicted RBP16.62■□□□□ 0.25
TMEM170A-201ENST00000357613 ABCC8Q09428 1581 aa16.62■□□□□ 0.25
TMEM170A-201ENST00000357613 MRS2Q9HD23 443 aa16.6■□□□□ 0.25
TMEM170A-201ENST00000357613 FANCD2Q9BXW9 1451 aa16.58■□□□□ 0.24
TMEM170A-201ENST00000357613 CEP164Q9UPV0 1460 aa16.57■□□□□ 0.24
TMEM170A-201ENST00000357613 CEP162Q5TB80 1403 aa16.55■□□□□ 0.24
TMEM170A-201ENST00000357613 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
TMEM170A-201ENST00000357613 PLEKHD1A6NEE1 506 aa16.54■□□□□ 0.24
TMEM170A-201ENST00000357613 NESP48681 1621 aa16.54■□□□□ 0.24
TMEM170A-201ENST00000357613 ANP32AP39687 249 aaKnown RBP16.54■□□□□ 0.24
TMEM170A-201ENST00000357613 KIF27Q86VH2 1401 aa16.51■□□□□ 0.23
TMEM170A-201ENST00000357613 PEG3Q9GZU2 1588 aa16.48■□□□□ 0.23
TMEM170A-201ENST00000357613 CFDP1Q9UEE9 299 aaPredicted RBP16.48■□□□□ 0.23
TMEM170A-201ENST00000357613 EIF4G2P78344 907 aaKnown RBP eCLIP16.48■□□□□ 0.23
TMEM170A-201ENST00000357613 WDR43Q15061 677 aaKnown RBP eCLIP16.48■□□□□ 0.23
TMEM170A-201ENST00000357613 CUX2O14529 1486 aa16.48■□□□□ 0.23
TMEM170A-201ENST00000357613 SOGA1O94964 1423 aa16.47■□□□□ 0.23
TMEM170A-201ENST00000357613 A0A0G2JS52 829 aa16.47■□□□□ 0.23
TMEM170A-201ENST00000357613 ZBTB7CA1YPR0 619 aa16.47■□□□□ 0.23
TMEM170A-201ENST00000357613 CCDC136Q96JN2 1154 aa16.47■□□□□ 0.23
TMEM170A-201ENST00000357613 SIN3AQ96ST3 1273 aa16.47■□□□□ 0.23
TMEM170A-201ENST00000357613 CFTRP13569 1480 aa16.46■□□□□ 0.23
TMEM170A-201ENST00000357613 TDRD9Q8NDG6 1382 aaKnown RBP16.44■□□□□ 0.22
TMEM170A-201ENST00000357613 GOLGA3Q08378 1498 aa16.44■□□□□ 0.22
TMEM170A-201ENST00000357613 C14orf37Q86TY3 774 aa16.44■□□□□ 0.22
TMEM170A-201ENST00000357613 PPP1R15AO75807 674 aaPredicted RBP16.43■□□□□ 0.22
TMEM170A-201ENST00000357613 EEA1Q15075 1411 aa16.43■□□□□ 0.22
TMEM170A-201ENST00000357613 HSP90AA1P07900 732 aaKnown RBP16.42■□□□□ 0.22
TMEM170A-201ENST00000357613 ARID4BQ4LE39 1312 aaPredicted RBP16.39■□□□□ 0.21
TMEM170A-201ENST00000357613 PPM1GO15355 546 aaPredicted RBP16.36■□□□□ 0.21
TMEM170A-201ENST00000357613 ARXQ96QS3 562 aa16.35■□□□□ 0.21
TMEM170A-201ENST00000357613 NEUROD2Q15784 382 aa16.33■□□□□ 0.2
TMEM170A-201ENST00000357613 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.32■□□□□ 0.2
TMEM170A-201ENST00000357613 CARD11Q9BXL7 1154 aa16.32■□□□□ 0.2
TMEM170A-201ENST00000357613 CARMIL1Q5VZK9 1371 aa16.32■□□□□ 0.2
TMEM170A-201ENST00000357613 NBR1Q14596 966 aa16.32■□□□□ 0.2
TMEM170A-201ENST00000357613 TNIKQ9UKE5 1360 aa16.32■□□□□ 0.2
TMEM170A-201ENST00000357613 UPF2Q9HAU5 1272 aaKnown RBP16.3■□□□□ 0.2
TMEM170A-201ENST00000357613 TNNT2P45379 298 aaPredicted RBP16.3■□□□□ 0.2
TMEM170A-201ENST00000357613 FGD5Q6ZNL6 1462 aa16.3■□□□□ 0.2
TMEM170A-201ENST00000357613 LAMC3Q9Y6N6 1575 aa16.28■□□□□ 0.2
TMEM170A-201ENST00000357613 RAD54L2Q9Y4B4 1467 aa16.27■□□□□ 0.19
TMEM170A-201ENST00000357613 MRC2Q9UBG0 1479 aa16.26■□□□□ 0.19
TMEM170A-201ENST00000357613 MLECQ14165 292 aa16.25■□□□□ 0.19
TMEM170A-201ENST00000357613 LMOD2Q6P5Q4 547 aa16.23■□□□□ 0.19
TMEM170A-201ENST00000357613 KNSTRNQ9Y448 316 aa16.23■□□□□ 0.19
TMEM170A-201ENST00000357613 FOXD1Q16676 465 aa16.23■□□□□ 0.19
TMEM170A-201ENST00000357613 SUPT16HQ9Y5B9 1047 aaKnown RBP16.23■□□□□ 0.19
TMEM170A-201ENST00000357613 KANK4Q5T7N3 995 aaPredicted RBP16.21■□□□□ 0.19
TMEM170A-201ENST00000357613 CC2D1BQ5T0F9 858 aaKnown RBP16.19■□□□□ 0.18
TMEM170A-201ENST00000357613 DCAF11Q8TEB1 546 aa16.19■□□□□ 0.18
TMEM170A-201ENST00000357613 SAFB2Q14151 953 aaKnown RBP eCLIP16.19■□□□□ 0.18
TMEM170A-201ENST00000357613 RUSC2Q8N2Y8 1516 aa16.19■□□□□ 0.18
TMEM170A-201ENST00000357613 TOPBP1Q92547 1522 aa16.19■□□□□ 0.18
TMEM170A-201ENST00000357613 LAS1LQ9Y4W2 734 aaKnown RBP16.17■□□□□ 0.18
TMEM170A-201ENST00000357613 SYNJ1O43426 1573 aa16.17■□□□□ 0.18
TMEM170A-201ENST00000357613 SOX12O15370 315 aa16.16■□□□□ 0.18
TMEM170A-201ENST00000357613 POGKQ9P215 609 aa16.16■□□□□ 0.18
TMEM170A-201ENST00000357613 CCNB3Q8WWL7 1395 aa16.16■□□□□ 0.18
TMEM170A-201ENST00000357613 CUX1P39880 1505 aa16.16■□□□□ 0.18
TMEM170A-201ENST00000357613 AQRO60306 1485 aaKnown RBP eCLIP16.15■□□□□ 0.18
TMEM170A-201ENST00000357613 HAP1P54257 671 aaPredicted RBP16.15■□□□□ 0.18
TMEM170A-201ENST00000357613 TRHP20396 242 aaPredicted RBP16.14■□□□□ 0.17
TMEM170A-201ENST00000357613 GAPVD1Q14C86 1478 aa16.14■□□□□ 0.17
TMEM170A-201ENST00000357613 EIF5BO60841 1220 aaKnown RBP16.14■□□□□ 0.17
TMEM170A-201ENST00000357613 GGT6Q6P531 493 aa16.13■□□□□ 0.17
TMEM170A-201ENST00000357613 MYH16Q9H6N6 1097 aa16.12■□□□□ 0.17
TMEM170A-201ENST00000357613 POLA1P09884 1462 aaPredicted RBP16.11■□□□□ 0.17
TMEM170A-201ENST00000357613 CFAP53Q96M91 514 aa16.11■□□□□ 0.17
TMEM170A-201ENST00000357613 DNMBPQ6XZF7 1577 aa16.1■□□□□ 0.17
TMEM170A-201ENST00000357613 U2SURPO15042 1029 aaKnown RBP16.09■□□□□ 0.17
TMEM170A-201ENST00000357613 FRAT1Q92837 279 aaPredicted RBP16.09■□□□□ 0.17
TMEM170A-201ENST00000357613 ANP32BQ92688 251 aaKnown RBP16.09■□□□□ 0.17
TMEM170A-201ENST00000357613 RAPGEF2Q9Y4G8 1499 aa16.08■□□□□ 0.16
TMEM170A-201ENST00000357613 CDCA8Q53HL2 280 aa16.08■□□□□ 0.16
TMEM170A-201ENST00000357613 TOP2BQ02880 1626 aa16.07■□□□□ 0.16
TMEM170A-201ENST00000357613 IGF1RP08069 1367 aa16.07■□□□□ 0.16
TMEM170A-201ENST00000357613 IFT140Q96RY7 1462 aa16.07■□□□□ 0.16
TMEM170A-201ENST00000357613 PKD2Q13563 968 aa16.05■□□□□ 0.16
TMEM170A-201ENST00000357613 RGS3P49796 1198 aa16.05■□□□□ 0.16
TMEM170A-201ENST00000357613 STK26Q9P289 416 aa16.05■□□□□ 0.16
TMEM170A-201ENST00000357613 URB2Q14146 1524 aaKnown RBP16.05■□□□□ 0.16
TMEM170A-201ENST00000357613 FHAD1B1AJZ9 1412 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms