RNA–Protein interactions for RNA: ENST00000357508.5

C1orf228-201, Transcript of Uncharacterized protein C1orf228, humanhuman

TSL 1 (best)

Gene C1orf228, Length 2,113 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-201ENST00000357508 PBRM1Q86U86 1689 aa39.86■■■■□ 3.97
C1orf228-201ENST00000357508 GRIN2BQ13224 1484 aa39.84■■■■□ 3.97
C1orf228-201ENST00000357508 EIF4G3O43432 1585 aaKnown RBP39.83■■■■□ 3.97
C1orf228-201ENST00000357508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.76■■■■□ 3.95
C1orf228-201ENST00000357508 CTTNBP2Q8WZ74 1663 aa39.72■■■■□ 3.95
C1orf228-201ENST00000357508 FHAD1B1AJZ9 1412 aa39.67■■■■□ 3.94
C1orf228-201ENST00000357508 ADAMTS12P58397 1594 aa39.66■■■■□ 3.94
C1orf228-201ENST00000357508 CCER1Q8TC90 406 aaPredicted RBP39.65■■■■□ 3.94
C1orf228-201ENST00000357508 SNAPC4Q5SXM2 1469 aa39.63■■■■□ 3.93
C1orf228-201ENST00000357508 KANK4Q5T7N3 995 aaPredicted RBP39.56■■■■□ 3.92
C1orf228-201ENST00000357508 EFCAB5A4FU69 1503 aa39.52■■■■□ 3.92
C1orf228-201ENST00000357508 MAGI1Q96QZ7 1491 aaPredicted RBP39.52■■■■□ 3.92
C1orf228-201ENST00000357508 MAP3K1Q13233 1512 aa39.48■■■■□ 3.91
C1orf228-201ENST00000357508 TIAM1Q13009 1591 aa39.46■■■■□ 3.91
C1orf228-201ENST00000357508 HNRNPUL2Q1KMD3 747 aaKnown RBP39.43■■■■□ 3.9
C1orf228-201ENST00000357508 PCF11O94913 1555 aaKnown RBP39.41■■■■□ 3.9
C1orf228-201ENST00000357508 SYNJ2O15056 1496 aa39.39■■■■□ 3.9
C1orf228-201ENST00000357508 GRIN2AQ12879 1464 aa39.36■■■■□ 3.89
C1orf228-201ENST00000357508 CFAP43Q8NDM7 1665 aa39.36■■■■□ 3.89
C1orf228-201ENST00000357508 FHOD3Q2V2M9 1422 aa39.36■■■■□ 3.89
C1orf228-201ENST00000357508 CHMP7Q8WUX9 453 aaPredicted RBP39.35■■■■□ 3.89
C1orf228-201ENST00000357508 RRBP1Q9P2E9 1410 aaKnown RBP39.33■■■■□ 3.89
C1orf228-201ENST00000357508 P3H3Q8IVL6 736 aa39.32■■■■□ 3.89
C1orf228-201ENST00000357508 FBLN2P98095 1184 aa39.31■■■■□ 3.88
C1orf228-201ENST00000357508 SAMD9Q5K651 1589 aa39.29■■■■□ 3.88
C1orf228-201ENST00000357508 FYCO1Q9BQS8 1478 aa39.26■■■■□ 3.87
C1orf228-201ENST00000357508 LRRC9Q6ZRR7 1453 aa39.24■■■■□ 3.87
C1orf228-201ENST00000357508 CASKIN1Q8WXD9 1431 aa39.2■■■■□ 3.87
C1orf228-201ENST00000357508 FMN1Q68DA7 1419 aa39.15■■■■□ 3.86
C1orf228-201ENST00000357508 IQGAP2Q13576 1575 aa39.15■■■■□ 3.86
C1orf228-201ENST00000357508 KIAA0586Q9BVV6 1533 aa39.13■■■■□ 3.86
C1orf228-201ENST00000357508 CEP170Q5SW79 1584 aa39.13■■■■□ 3.85
C1orf228-201ENST00000357508 CCNB3Q8WWL7 1395 aa39.13■■■■□ 3.85
C1orf228-201ENST00000357508 NUP160Q12769 1436 aa39.09■■■■□ 3.85
C1orf228-201ENST00000357508 CHD1O14646 1710 aa39.01■■■■□ 3.84
C1orf228-201ENST00000357508 ATP1B4Q9UN42 357 aaPredicted RBP39.01■■■■□ 3.83
C1orf228-201ENST00000357508 LRRIQ1Q96JM4 1722 aa39■■■■□ 3.83
C1orf228-201ENST00000357508 UGGT2Q9NYU1 1516 aa38.97■■■■□ 3.83
C1orf228-201ENST00000357508 PHLDB1Q86UU1 1377 aa38.96■■■■□ 3.83
C1orf228-201ENST00000357508 JPH4Q96JJ6 628 aa38.83■■■■□ 3.81
C1orf228-201ENST00000357508 DISP1Q96F81 1524 aa38.83■■■■□ 3.81
C1orf228-201ENST00000357508 DHX57Q6P158 1386 aaKnown RBP38.78■■■■□ 3.8
C1orf228-201ENST00000357508 KIAA0556O60303 1618 aa38.76■■■■□ 3.8
C1orf228-201ENST00000357508 ITGAEP38570 1179 aa38.72■■■■□ 3.79
C1orf228-201ENST00000357508 HECW1Q76N89 1606 aa38.71■■■■□ 3.79
C1orf228-201ENST00000357508 CLSPNQ9HAW4 1339 aa38.71■■■■□ 3.79
C1orf228-201ENST00000357508 MTUS2Q5JR59 1369 aa38.7■■■■□ 3.79
C1orf228-201ENST00000357508 CCDC18Q5T9S5 1454 aa38.67■■■■□ 3.78
C1orf228-201ENST00000357508 EHBP1L1Q8N3D4 1523 aa38.66■■■■□ 3.78
C1orf228-201ENST00000357508 SUPT6HQ7KZ85 1726 aaKnown RBP38.64■■■■□ 3.78
C1orf228-201ENST00000357508 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.64■■■■□ 3.78
C1orf228-201ENST00000357508 CARMIL2Q6F5E8 1435 aa38.63■■■■□ 3.77
C1orf228-201ENST00000357508 FAM50AQ14320 339 aaKnown RBP38.62■■■■□ 3.77
C1orf228-201ENST00000357508 FGD6Q6ZV73 1430 aa38.59■■■■□ 3.77
C1orf228-201ENST00000357508 PRG4Q92954 1404 aaPredicted RBP38.58■■■■□ 3.77
C1orf228-201ENST00000357508 CLASP1Q7Z460 1538 aa38.58■■■■□ 3.77
C1orf228-201ENST00000357508 NCOA2Q15596 1464 aa38.57■■■■□ 3.77
C1orf228-201ENST00000357508 MAGI3Q5TCQ9 1506 aa38.57■■■■□ 3.77
C1orf228-201ENST00000357508 RAB3GAP2Q9H2M9 1393 aa38.57■■■■□ 3.76
C1orf228-201ENST00000357508 SHROOM2Q13796 1616 aa38.55■■■■□ 3.76
C1orf228-201ENST00000357508 EPRSP07814 1512 aaKnown RBP38.54■■■■□ 3.76
C1orf228-201ENST00000357508 SETD5Q9C0A6 1442 aa38.53■■■■□ 3.76
C1orf228-201ENST00000357508 ARHGEF11O15085 1522 aa38.51■■■■□ 3.75
C1orf228-201ENST00000357508 MYOM3Q5VTT5 1437 aa38.48■■■■□ 3.75
C1orf228-201ENST00000357508 CDK13Q14004 1512 aaKnown RBP38.45■■■■□ 3.75
C1orf228-201ENST00000357508 ZNF316A6NFI3 1004 aaPredicted RBP38.4■■■■□ 3.74
C1orf228-201ENST00000357508 RAPGEF6Q8TEU7 1601 aa38.39■■■■□ 3.74
C1orf228-201ENST00000357508 ERCC6L2Q5T890 1561 aa38.39■■■■□ 3.74
C1orf228-201ENST00000357508 OSCARQ8IYS5 282 aa38.38■■■■□ 3.73
C1orf228-201ENST00000357508 PLB1Q6P1J6 1458 aa38.35■■■■□ 3.73
C1orf228-201ENST00000357508 PTPN23Q9H3S7 1636 aa38.35■■■■□ 3.73
C1orf228-201ENST00000357508 MAPKBP1O60336 1514 aa38.34■■■■□ 3.73
C1orf228-201ENST00000357508 PTPRGP23470 1445 aa38.31■■■■□ 3.72
C1orf228-201ENST00000357508 DIEXFQ68CQ4 756 aaKnown RBP38.31■■■■□ 3.72
C1orf228-201ENST00000357508 ARID3CA6NKF2 412 aa38.3■■■■□ 3.72
C1orf228-201ENST00000357508 NUP153P49790 1475 aaKnown RBP38.3■■■■□ 3.72
C1orf228-201ENST00000357508 PTPRKQ15262 1439 aa38.24■■■■□ 3.71
C1orf228-201ENST00000357508 TCOF1Q13428 1488 aaKnown RBP38.24■■■■□ 3.71
C1orf228-201ENST00000357508 ABCA8O94911 1581 aa38.23■■■■□ 3.71
C1orf228-201ENST00000357508 HFM1A2PYH4 1435 aa38.16■■■■□ 3.7
C1orf228-201ENST00000357508 MIA2Q96PC5 1412 aa38.14■■■■□ 3.7
C1orf228-201ENST00000357508 UACAQ9BZF9 1416 aa38.08■■■■□ 3.69
C1orf228-201ENST00000357508 NAIPQ13075 1403 aa38.06■■■■□ 3.68
C1orf228-201ENST00000357508 GCC2Q8IWJ2 1684 aa38.02■■■■□ 3.68
C1orf228-201ENST00000357508 ATP10BO94823 1461 aa38.01■■■■□ 3.68
C1orf228-201ENST00000357508 CDK11AQ9UQ88 783 aaPredicted RBP38■■■■□ 3.67
C1orf228-201ENST00000357508 TROQ12816 1431 aaPredicted RBP37.97■■■■□ 3.67
C1orf228-201ENST00000357508 ADCY10Q96PN6 1610 aa37.97■■■■□ 3.67
C1orf228-201ENST00000357508 ABCC2Q92887 1545 aa37.94■■■■□ 3.66
C1orf228-201ENST00000357508 AKNAQ7Z591 1439 aa37.93■■■■□ 3.66
C1orf228-201ENST00000357508 ITSN2Q9NZM3 1697 aa37.89■■■■□ 3.66
C1orf228-201ENST00000357508 DNMT1P26358 1616 aaKnown RBP37.87■■■■□ 3.65
C1orf228-201ENST00000357508 KIF14Q15058 1648 aa37.87■■■■□ 3.65
C1orf228-201ENST00000357508 UHRF1BP1LA0JNW5 1464 aa37.86■■■■□ 3.65
C1orf228-201ENST00000357508 SIN3AQ96ST3 1273 aa37.85■■■■□ 3.65
C1orf228-201ENST00000357508 PLEKHD1A6NEE1 506 aa37.84■■■■□ 3.65
C1orf228-201ENST00000357508 CHIC2Q9UKJ5 165 aa37.81■■■■□ 3.64
C1orf228-201ENST00000357508 DAPK1P53355 1430 aa37.8■■■■□ 3.64
C1orf228-201ENST00000357508 RRP7BPQ9NSQ0 103 aa37.79■■■■□ 3.64
C1orf228-201ENST00000357508 KDM6BO15054 1643 aa37.77■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms