RNA–Protein interactions for RNA: ENST00000356937.7

CDK11A-202, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-202ENST00000356937 SYNJ2O15056 1496 aa28.42■■■□□ 2.14
CDK11A-202ENST00000356937 GRIN2AQ12879 1464 aa28.4■■■□□ 2.14
CDK11A-202ENST00000356937 ARHGAP35Q9NRY4 1499 aa28.34■■■□□ 2.13
CDK11A-202ENST00000356937 ARAP1Q96P48 1450 aa28.29■■■□□ 2.12
CDK11A-202ENST00000356937 P3H3Q8IVL6 736 aa28.26■■■□□ 2.11
CDK11A-202ENST00000356937 VPS8Q8N3P4 1428 aa28.25■■■□□ 2.11
CDK11A-202ENST00000356937 IQGAP2Q13576 1575 aa28.25■■■□□ 2.11
CDK11A-202ENST00000356937 CEP170Q5SW79 1584 aa28.23■■■□□ 2.11
CDK11A-202ENST00000356937 KIAA0586Q9BVV6 1533 aa28.21■■■□□ 2.11
CDK11A-202ENST00000356937 CHD1O14646 1710 aa28.21■■■□□ 2.11
CDK11A-202ENST00000356937 EFCAB5A4FU69 1503 aa28.19■■■□□ 2.1
CDK11A-202ENST00000356937 NUP160Q12769 1436 aa28.18■■■□□ 2.1
CDK11A-202ENST00000356937 PPARGC1BQ86YN6 1023 aaKnown RBP28.16■■■□□ 2.1
CDK11A-202ENST00000356937 FHOD3Q2V2M9 1422 aa28.15■■■□□ 2.1
CDK11A-202ENST00000356937 SAMD9Q5K651 1589 aa28.12■■■□□ 2.09
CDK11A-202ENST00000356937 UGGT2Q9NYU1 1516 aa28.08■■■□□ 2.09
CDK11A-202ENST00000356937 APLP2Q06481 763 aa28.04■■■□□ 2.08
CDK11A-202ENST00000356937 JPH4Q96JJ6 628 aa28.03■■■□□ 2.08
CDK11A-202ENST00000356937 TTBK1Q5TCY1 1321 aaPredicted RBP28.01■■■□□ 2.07
CDK11A-202ENST00000356937 DISP1Q96F81 1524 aa27.98■■■□□ 2.07
CDK11A-202ENST00000356937 FMN1Q68DA7 1419 aa27.97■■■□□ 2.07
CDK11A-202ENST00000356937 KIAA0556O60303 1618 aa27.96■■■□□ 2.07
CDK11A-202ENST00000356937 ATP1B4Q9UN42 357 aaPredicted RBP27.95■■■□□ 2.07
CDK11A-202ENST00000356937 PCF11O94913 1555 aaKnown RBP27.93■■■□□ 2.06
CDK11A-202ENST00000356937 CARMIL2Q6F5E8 1435 aa27.89■■■□□ 2.06
CDK11A-202ENST00000356937 CASKIN1Q8WXD9 1431 aa27.88■■■□□ 2.05
CDK11A-202ENST00000356937 FYCO1Q9BQS8 1478 aa27.86■■■□□ 2.05
CDK11A-202ENST00000356937 TRIM26Q12899 539 aaPredicted RBP27.86■■■□□ 2.05
CDK11A-202ENST00000356937 PRG4Q92954 1404 aaPredicted RBP27.85■■■□□ 2.05
CDK11A-202ENST00000356937 PCGF6Q9BYE7 350 aa27.85■■■□□ 2.05
CDK11A-202ENST00000356937 CLASP1Q7Z460 1538 aa27.83■■■□□ 2.05
CDK11A-202ENST00000356937 SHROOM2Q13796 1616 aa27.8■■■□□ 2.04
CDK11A-202ENST00000356937 KANK4Q5T7N3 995 aaPredicted RBP27.8■■■□□ 2.04
CDK11A-202ENST00000356937 TIAM1Q13009 1591 aa27.77■■■□□ 2.04
CDK11A-202ENST00000356937 OSCARQ8IYS5 282 aa27.75■■■□□ 2.03
CDK11A-202ENST00000356937 MAP3K1Q13233 1512 aa27.74■■■□□ 2.03
CDK11A-202ENST00000356937 LRRIQ1Q96JM4 1722 aa27.71■■■□□ 2.03
CDK11A-202ENST00000356937 CFAP43Q8NDM7 1665 aa27.71■■■□□ 2.03
CDK11A-202ENST00000356937 ERCC6L2Q5T890 1561 aa27.7■■■□□ 2.03
CDK11A-202ENST00000356937 HECW1Q76N89 1606 aa27.7■■■□□ 2.02
CDK11A-202ENST00000356937 ARID3CA6NKF2 412 aa27.67■■■□□ 2.02
CDK11A-202ENST00000356937 RAPGEF6Q8TEU7 1601 aa27.67■■■□□ 2.02
CDK11A-202ENST00000356937 PLB1Q6P1J6 1458 aa27.66■■■□□ 2.02
CDK11A-202ENST00000356937 PTPRGP23470 1445 aa27.65■■■□□ 2.02
CDK11A-202ENST00000356937 LRRC9Q6ZRR7 1453 aa27.65■■■□□ 2.02
CDK11A-202ENST00000356937 EPRSP07814 1512 aaKnown RBP27.62■■■□□ 2.01
CDK11A-202ENST00000356937 CCDC18Q5T9S5 1454 aa27.61■■■□□ 2.01
CDK11A-202ENST00000356937 NUP153P49790 1475 aaKnown RBP27.59■■■□□ 2.01
CDK11A-202ENST00000356937 CDK13Q14004 1512 aaKnown RBP27.59■■■□□ 2.01
CDK11A-202ENST00000356937 MTUS2Q5JR59 1369 aa27.56■■■□□ 2
CDK11A-202ENST00000356937 ABCA8O94911 1581 aa27.56■■■□□ 2
CDK11A-202ENST00000356937 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.55■■■□□ 2
CDK11A-202ENST00000356937 HNRNPUL2Q1KMD3 747 aaKnown RBP27.55■■■□□ 2
CDK11A-202ENST00000356937 UACAQ9BZF9 1416 aa27.48■■□□□ 1.99
CDK11A-202ENST00000356937 MAGI3Q5TCQ9 1506 aa27.48■■□□□ 1.99
CDK11A-202ENST00000356937 EHBP1L1Q8N3D4 1523 aa27.45■■□□□ 1.98
CDK11A-202ENST00000356937 CDK11AQ9UQ88 783 aaPredicted RBP27.42■■□□□ 1.98
CDK11A-202ENST00000356937 PHLDB1Q86UU1 1377 aa27.42■■□□□ 1.98
CDK11A-202ENST00000356937 ATP10BO94823 1461 aa27.41■■□□□ 1.98
CDK11A-202ENST00000356937 SUPT6HQ7KZ85 1726 aaKnown RBP27.39■■□□□ 1.98
CDK11A-202ENST00000356937 ABCC2Q92887 1545 aa27.38■■□□□ 1.97
CDK11A-202ENST00000356937 NCOA2Q15596 1464 aa27.37■■□□□ 1.97
CDK11A-202ENST00000356937 RRBP1Q9P2E9 1410 aaKnown RBP27.34■■□□□ 1.97
CDK11A-202ENST00000356937 CCNB3Q8WWL7 1395 aa27.32■■□□□ 1.96
CDK11A-202ENST00000356937 PLEKHD1A6NEE1 506 aa27.32■■□□□ 1.96
CDK11A-202ENST00000356937 TROQ12816 1431 aaPredicted RBP27.3■■□□□ 1.96
CDK11A-202ENST00000356937 UHRF1BP1LA0JNW5 1464 aa27.29■■□□□ 1.96
CDK11A-202ENST00000356937 ARHGEF11O15085 1522 aa27.27■■□□□ 1.96
CDK11A-202ENST00000356937 FAM50AQ14320 339 aaKnown RBP27.24■■□□□ 1.95
CDK11A-202ENST00000356937 ADCY10Q96PN6 1610 aa27.24■■□□□ 1.95
CDK11A-202ENST00000356937 MYOM3Q5VTT5 1437 aa27.23■■□□□ 1.95
CDK11A-202ENST00000356937 FGD6Q6ZV73 1430 aa27.22■■□□□ 1.95
CDK11A-202ENST00000356937 ZCCHC11Q5TAX3 1644 aaKnown RBP27.21■■□□□ 1.95
CDK11A-202ENST00000356937 KDM5BQ9UGL1 1544 aa27.2■■□□□ 1.95
CDK11A-202ENST00000356937 KIF14Q15058 1648 aa27.2■■□□□ 1.95
CDK11A-202ENST00000356937 ITGAEP38570 1179 aa27.19■■□□□ 1.94
CDK11A-202ENST00000356937 RIMBP3CA6NJZ7 1639 aa27.14■■□□□ 1.94
CDK11A-202ENST00000356937 RIMBP3BA6NNM3 1639 aa27.14■■□□□ 1.94
CDK11A-202ENST00000356937 RIMBP3Q9UFD9 1639 aa27.14■■□□□ 1.94
CDK11A-202ENST00000356937 PTPN23Q9H3S7 1636 aa27.1■■□□□ 1.93
CDK11A-202ENST00000356937 KCNH8Q96L42 1107 aa27.1■■□□□ 1.93
CDK11A-202ENST00000356937 CYB5RLQ6IPT4 315 aa27.09■■□□□ 1.93
CDK11A-202ENST00000356937 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.08■■□□□ 1.92
CDK11A-202ENST00000356937 MIA2Q96PC5 1412 aa27.07■■□□□ 1.92
CDK11A-202ENST00000356937 NPM1P06748 294 aaKnown RBP eCLIP27.07■■□□□ 1.92
CDK11A-202ENST00000356937 ABCC10Q5T3U5 1492 aa27.06■■□□□ 1.92
CDK11A-202ENST00000356937 GPATCH8Q9UKJ3 1502 aaKnown RBP27.05■■□□□ 1.92
CDK11A-202ENST00000356937 CFDP1Q9UEE9 299 aaPredicted RBP27.04■■□□□ 1.92
CDK11A-202ENST00000356937 ITSN2Q9NZM3 1697 aa27.03■■□□□ 1.92
CDK11A-202ENST00000356937 TCOF1Q13428 1488 aaKnown RBP27.01■■□□□ 1.91
CDK11A-202ENST00000356937 CDC42BPAQ5VT25 1732 aa27.01■■□□□ 1.91
CDK11A-202ENST00000356937 ZNF644Q9H582 1327 aaPredicted RBP26.99■■□□□ 1.91
CDK11A-202ENST00000356937 ZNF777Q9ULD5 760 aaPredicted RBP26.99■■□□□ 1.91
CDK11A-202ENST00000356937 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.98■■□□□ 1.91
CDK11A-202ENST00000356937 WDR7Q9Y4E6 1490 aa26.98■■□□□ 1.91
CDK11A-202ENST00000356937 ASXL2Q76L83 1435 aa26.97■■□□□ 1.91
CDK11A-202ENST00000356937 TTC37Q6PGP7 1564 aa26.97■■□□□ 1.91
CDK11A-202ENST00000356937 CAMSAP2Q08AD1 1489 aa26.92■■□□□ 1.9
CDK11A-202ENST00000356937 PTPRKQ15262 1439 aa26.91■■□□□ 1.9
CDK11A-202ENST00000356937 CDC42BPBQ9Y5S2 1711 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms