RNA–Protein interactions for RNA: ENST00000356537.8

CCDC25-201, Transcript of coiled-coil domain containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC25, Length 3,626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-201ENST00000356537 LRRIQ1Q96JM4 1722 aa14.48□□□□□ -0.09
CCDC25-201ENST00000356537 CCER1Q8TC90 406 aaPredicted RBP14.48□□□□□ -0.09
CCDC25-201ENST00000356537 CFAP43Q8NDM7 1665 aa14.47□□□□□ -0.09
CCDC25-201ENST00000356537 WDR62O43379 1518 aa14.46□□□□□ -0.09
CCDC25-201ENST00000356537 FHOD3Q2V2M9 1422 aa14.46□□□□□ -0.1
CCDC25-201ENST00000356537 HNRNPUL2Q1KMD3 747 aaKnown RBP14.46□□□□□ -0.1
CCDC25-201ENST00000356537 SAMD9Q5K651 1589 aa14.45□□□□□ -0.1
CCDC25-201ENST00000356537 APLP2Q06481 763 aa14.45□□□□□ -0.1
CCDC25-201ENST00000356537 RRBP1Q9P2E9 1410 aaKnown RBP14.44□□□□□ -0.1
CCDC25-201ENST00000356537 AQRO60306 1485 aaKnown RBP eCLIP14.44□□□□□ -0.11e-6■■■■■ 32.8
CCDC25-201ENST00000356537 MAP3K1Q13233 1512 aa14.44□□□□□ -0.1
CCDC25-201ENST00000356537 EFCAB5A4FU69 1503 aa14.43□□□□□ -0.1
CCDC25-201ENST00000356537 P3H3Q8IVL6 736 aa14.43□□□□□ -0.1
CCDC25-201ENST00000356537 ZNF608Q9ULD9 1512 aaPredicted RBP14.43□□□□□ -0.1
CCDC25-201ENST00000356537 ADAMTS12P58397 1594 aa14.42□□□□□ -0.1
CCDC25-201ENST00000356537 THOC2Q8NI27 1593 aaKnown RBP14.41□□□□□ -0.1
CCDC25-201ENST00000356537 SNAPC4Q5SXM2 1469 aa14.4□□□□□ -0.1
CCDC25-201ENST00000356537 LRRC9Q6ZRR7 1453 aa14.4□□□□□ -0.1
CCDC25-201ENST00000356537 FYCO1Q9BQS8 1478 aa14.36□□□□□ -0.11
CCDC25-201ENST00000356537 FHAD1B1AJZ9 1412 aa14.36□□□□□ -0.11
CCDC25-201ENST00000356537 EIF4G3O43432 1585 aaKnown RBP14.35□□□□□ -0.11
CCDC25-201ENST00000356537 CASKIN1Q8WXD9 1431 aa14.35□□□□□ -0.11
CCDC25-201ENST00000356537 PHLDB1Q86UU1 1377 aa14.34□□□□□ -0.11
CCDC25-201ENST00000356537 IFT140Q96RY7 1462 aa14.33□□□□□ -0.12
CCDC25-201ENST00000356537 CCNB3Q8WWL7 1395 aa14.32□□□□□ -0.12
CCDC25-201ENST00000356537 GRIN2BQ13224 1484 aa14.32□□□□□ -0.12
CCDC25-201ENST00000356537 IQGAP2Q13576 1575 aa14.3□□□□□ -0.12
CCDC25-201ENST00000356537 FMN1Q68DA7 1419 aa14.27□□□□□ -0.13
CCDC25-201ENST00000356537 ERCC6Q03468 1493 aa14.27□□□□□ -0.13
CCDC25-201ENST00000356537 MAGI3Q5TCQ9 1506 aa14.27□□□□□ -0.13
CCDC25-201ENST00000356537 DHX57Q6P158 1386 aaKnown RBP14.26□□□□□ -0.13
CCDC25-201ENST00000356537 UGGT2Q9NYU1 1516 aa14.22□□□□□ -0.13
CCDC25-201ENST00000356537 ATP1B4Q9UN42 357 aaPredicted RBP14.21□□□□□ -0.13
CCDC25-201ENST00000356537 GRIN2AQ12879 1464 aa14.21□□□□□ -0.13
CCDC25-201ENST00000356537 DISP1Q96F81 1524 aa14.21□□□□□ -0.14
CCDC25-201ENST00000356537 CEP170Q5SW79 1584 aa14.2□□□□□ -0.14
CCDC25-201ENST00000356537 KIAA0556O60303 1618 aa14.18□□□□□ -0.14
CCDC25-201ENST00000356537 ARHGEF11O15085 1522 aa14.18□□□□□ -0.14
CCDC25-201ENST00000356537 ITGAEP38570 1179 aa14.18□□□□□ -0.14
CCDC25-201ENST00000356537 MAPKBP1O60336 1514 aa14.17□□□□□ -0.14
CCDC25-201ENST00000356537 RAB3GAP2Q9H2M9 1393 aa14.16□□□□□ -0.14
CCDC25-201ENST00000356537 KIAA0586Q9BVV6 1533 aa14.16□□□□□ -0.14
CCDC25-201ENST00000356537 CDK13Q14004 1512 aaKnown RBP14.15□□□□□ -0.14
CCDC25-201ENST00000356537 MAGI1Q96QZ7 1491 aaPredicted RBP14.15□□□□□ -0.14
CCDC25-201ENST00000356537 HECW1Q76N89 1606 aa14.15□□□□□ -0.14
CCDC25-201ENST00000356537 SUPT6HQ7KZ85 1726 aaKnown RBP14.15□□□□□ -0.14
CCDC25-201ENST00000356537 NCOA2Q15596 1464 aa14.14□□□□□ -0.15
CCDC25-201ENST00000356537 FGD6Q6ZV73 1430 aa14.14□□□□□ -0.15
CCDC25-201ENST00000356537 PTPRKQ15262 1439 aa14.14□□□□□ -0.15
CCDC25-201ENST00000356537 EPRSP07814 1512 aaKnown RBP14.13□□□□□ -0.15
CCDC25-201ENST00000356537 EHBP1L1Q8N3D4 1523 aa14.13□□□□□ -0.15
CCDC25-201ENST00000356537 SYNJ2O15056 1496 aa14.12□□□□□ -0.15
CCDC25-201ENST00000356537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.11□□□□□ -0.15
CCDC25-201ENST00000356537 MTUS2Q5JR59 1369 aa14.1□□□□□ -0.15
CCDC25-201ENST00000356537 FAM50AQ14320 339 aaKnown RBP14.1□□□□□ -0.15
CCDC25-201ENST00000356537 CCDC18Q5T9S5 1454 aa14.1□□□□□ -0.15
CCDC25-201ENST00000356537 SETD5Q9C0A6 1442 aa14.09□□□□□ -0.15
CCDC25-201ENST00000356537 CLSPNQ9HAW4 1339 aa14.08□□□□□ -0.15
CCDC25-201ENST00000356537 PTPN23Q9H3S7 1636 aa14.08□□□□□ -0.16
CCDC25-201ENST00000356537 NUP153P49790 1475 aaKnown RBP14.08□□□□□ -0.16
CCDC25-201ENST00000356537 NUP160Q12769 1436 aa14.08□□□□□ -0.16
CCDC25-201ENST00000356537 MYOM3Q5VTT5 1437 aa14.08□□□□□ -0.16
CCDC25-201ENST00000356537 RAPGEF6Q8TEU7 1601 aa14.07□□□□□ -0.16
CCDC25-201ENST00000356537 ZNF316A6NFI3 1004 aaPredicted RBP14.04□□□□□ -0.16
CCDC25-201ENST00000356537 DIEXFQ68CQ4 756 aaKnown RBP14.03□□□□□ -0.16
CCDC25-201ENST00000356537 ARID3CA6NKF2 412 aa14.03□□□□□ -0.16
CCDC25-201ENST00000356537 TCOF1Q13428 1488 aaKnown RBP14.02□□□□□ -0.16
CCDC25-201ENST00000356537 PLB1Q6P1J6 1458 aa14.02□□□□□ -0.17
CCDC25-201ENST00000356537 CHD1O14646 1710 aa14.02□□□□□ -0.17
CCDC25-201ENST00000356537 CHMP7Q8WUX9 453 aaPredicted RBP14.01□□□□□ -0.17
CCDC25-201ENST00000356537 KDM6BO15054 1643 aa14□□□□□ -0.17
CCDC25-201ENST00000356537 HFM1A2PYH4 1435 aa13.99□□□□□ -0.17
CCDC25-201ENST00000356537 NAIPQ13075 1403 aa13.99□□□□□ -0.17
CCDC25-201ENST00000356537 FBLN2P98095 1184 aa13.98□□□□□ -0.17
CCDC25-201ENST00000356537 GCC2Q8IWJ2 1684 aa13.97□□□□□ -0.17
CCDC25-201ENST00000356537 KIF14Q15058 1648 aa13.97□□□□□ -0.17
CCDC25-201ENST00000356537 DENND4BO75064 1496 aaPredicted RBP13.95□□□□□ -0.18
CCDC25-201ENST00000356537 ABCA8O94911 1581 aa13.95□□□□□ -0.18
CCDC25-201ENST00000356537 JPH4Q96JJ6 628 aa13.95□□□□□ -0.18
CCDC25-201ENST00000356537 ADCY10Q96PN6 1610 aa13.94□□□□□ -0.18
CCDC25-201ENST00000356537 SIN3AQ96ST3 1273 aa13.94□□□□□ -0.18
CCDC25-201ENST00000356537 PRG4Q92954 1404 aaPredicted RBP13.93□□□□□ -0.18
CCDC25-201ENST00000356537 MIA2Q96PC5 1412 aa13.92□□□□□ -0.18
CCDC25-201ENST00000356537 SHROOM2Q13796 1616 aa13.91□□□□□ -0.18
CCDC25-201ENST00000356537 DNMT1P26358 1616 aaKnown RBP13.9□□□□□ -0.18
CCDC25-201ENST00000356537 ZNF644Q9H582 1327 aaPredicted RBP13.89□□□□□ -0.19
CCDC25-201ENST00000356537 ERCC6L2Q5T890 1561 aa13.89□□□□□ -0.19
CCDC25-201ENST00000356537 UACAQ9BZF9 1416 aa13.88□□□□□ -0.19
CCDC25-201ENST00000356537 CDC42BPAQ5VT25 1732 aa13.88□□□□□ -0.19
CCDC25-201ENST00000356537 TROQ12816 1431 aaPredicted RBP13.88□□□□□ -0.19
CCDC25-201ENST00000356537 CARMIL2Q6F5E8 1435 aa13.87□□□□□ -0.19
CCDC25-201ENST00000356537 KDM5BQ9UGL1 1544 aa13.87□□□□□ -0.19
CCDC25-201ENST00000356537 ATP10BO94823 1461 aa13.86□□□□□ -0.19
CCDC25-201ENST00000356537 CHIC2Q9UKJ5 165 aa13.86□□□□□ -0.19
CCDC25-201ENST00000356537 DAPK1P53355 1430 aa13.86□□□□□ -0.19
CCDC25-201ENST00000356537 ABCC5O15440 1437 aa13.85□□□□□ -0.19
CCDC25-201ENST00000356537 AKNAQ7Z591 1439 aa13.85□□□□□ -0.19
CCDC25-201ENST00000356537 CROCC2H7BZ55 1655 aa13.85□□□□□ -0.19
CCDC25-201ENST00000356537 RRP7BPQ9NSQ0 103 aa13.85□□□□□ -0.19
CCDC25-201ENST00000356537 GPATCH8Q9UKJ3 1502 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms