RNA–Protein interactions for RNA: ENST00000355951.2

TCAF1-201, Transcript of TRPM8 channel associated factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TCAF1, Length 3,343 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1-201ENST00000355951 NEUROD1Q13562 356 aa13.84□□□□□ -0.19
TCAF1-201ENST00000355951 EEA1Q15075 1411 aa13.83□□□□□ -0.2
TCAF1-201ENST00000355951 SYNJ2O15056 1496 aa13.82□□□□□ -0.2
TCAF1-201ENST00000355951 SNAPC4Q5SXM2 1469 aa13.82□□□□□ -0.2
TCAF1-201ENST00000355951 TDRD9Q8NDG6 1382 aaKnown RBP13.8□□□□□ -0.2
TCAF1-201ENST00000355951 FHAD1B1AJZ9 1412 aa13.79□□□□□ -0.2
TCAF1-201ENST00000355951 CLASP1Q7Z460 1538 aa13.79□□□□□ -0.2
TCAF1-201ENST00000355951 CENPBP07199 599 aaPredicted RBP13.79□□□□□ -0.2
TCAF1-201ENST00000355951 IGF1RP08069 1367 aa13.77□□□□□ -0.2
TCAF1-201ENST00000355951 KIF21BO75037 1637 aa13.75□□□□□ -0.21
TCAF1-201ENST00000355951 NUP160Q12769 1436 aa13.75□□□□□ -0.21
TCAF1-201ENST00000355951 GTF3C3Q9Y5Q9 886 aa13.75□□□□□ -0.21
TCAF1-201ENST00000355951 SHROOM2Q13796 1616 aa13.75□□□□□ -0.21
TCAF1-201ENST00000355951 GRIN2AQ12879 1464 aa13.75□□□□□ -0.21
TCAF1-201ENST00000355951 PRXQ9BXM0 1461 aa13.75□□□□□ -0.21
TCAF1-201ENST00000355951 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.74□□□□□ -0.21
TCAF1-201ENST00000355951 RUSC2Q8N2Y8 1516 aa13.73□□□□□ -0.21
TCAF1-201ENST00000355951 CEP170Q5SW79 1584 aa13.72□□□□□ -0.21
TCAF1-201ENST00000355951 PODXL2Q9NZ53 605 aa13.7□□□□□ -0.22
TCAF1-201ENST00000355951 PLPPR3Q6T4P5 718 aa13.69□□□□□ -0.22
TCAF1-201ENST00000355951 DIEXFQ68CQ4 756 aaKnown RBP13.69□□□□□ -0.22
TCAF1-201ENST00000355951 CTTNBP2Q8WZ74 1663 aa13.69□□□□□ -0.22
TCAF1-201ENST00000355951 CCER1Q8TC90 406 aaPredicted RBP13.69□□□□□ -0.22
TCAF1-201ENST00000355951 RAPGEF2Q9Y4G8 1499 aa13.66□□□□□ -0.22
TCAF1-201ENST00000355951 CARMIL1Q5VZK9 1371 aa13.63□□□□□ -0.23
TCAF1-201ENST00000355951 KIAA0586Q9BVV6 1533 aa13.6□□□□□ -0.23
TCAF1-201ENST00000355951 UGGT2Q9NYU1 1516 aa13.58□□□□□ -0.24
TCAF1-201ENST00000355951 IQGAP2Q13576 1575 aa13.57□□□□□ -0.24
TCAF1-201ENST00000355951 KLHL34Q8N239 644 aa13.56□□□□□ -0.24
TCAF1-201ENST00000355951 ANO8Q9HCE9 1232 aaPredicted RBP13.56□□□□□ -0.24
TCAF1-201ENST00000355951 CEP162Q5TB80 1403 aa13.56□□□□□ -0.24
TCAF1-201ENST00000355951 AEBP2Q6ZN18 517 aaPredicted RBP13.55□□□□□ -0.24
TCAF1-201ENST00000355951 SAMD9Q5K651 1589 aa13.54□□□□□ -0.24
TCAF1-201ENST00000355951 CSRNP3Q8WYN3 585 aa13.54□□□□□ -0.24
TCAF1-201ENST00000355951 RANGAP1P46060 587 aaPredicted RBP13.54□□□□□ -0.24
TCAF1-201ENST00000355951 OSCARQ8IYS5 282 aa13.54□□□□□ -0.24
TCAF1-201ENST00000355951 RIMBP3CA6NJZ7 1639 aa13.53□□□□□ -0.24
TCAF1-201ENST00000355951 RIMBP3BA6NNM3 1639 aa13.53□□□□□ -0.24
TCAF1-201ENST00000355951 RIMBP3Q9UFD9 1639 aa13.53□□□□□ -0.24
TCAF1-201ENST00000355951 NCBP3Q53F19 620 aaKnown RBP13.52□□□□□ -0.24
TCAF1-201ENST00000355951 GOLGA3Q08378 1498 aa13.51□□□□□ -0.25
TCAF1-201ENST00000355951 CHMP7Q8WUX9 453 aaPredicted RBP13.51□□□□□ -0.25
TCAF1-201ENST00000355951 TNIKQ9UKE5 1360 aa13.51□□□□□ -0.25
TCAF1-201ENST00000355951 ZNF316A6NFI3 1004 aaPredicted RBP13.51□□□□□ -0.25
TCAF1-201ENST00000355951 RTN4Q9NQC3 1192 aaKnown RBP13.51□□□□□ -0.25
TCAF1-201ENST00000355951 ARHGEF11O15085 1522 aa13.49□□□□□ -0.25
TCAF1-201ENST00000355951 KIAA0556O60303 1618 aa13.48□□□□□ -0.25
TCAF1-201ENST00000355951 DNAJC5Q9H3Z4 198 aa13.47□□□□□ -0.25
TCAF1-201ENST00000355951 DISP1Q96F81 1524 aa13.47□□□□□ -0.25
TCAF1-201ENST00000355951 EFCAB5A4FU69 1503 aa13.47□□□□□ -0.25
TCAF1-201ENST00000355951 ERCC6L2Q5T890 1561 aa13.44□□□□□ -0.26
TCAF1-201ENST00000355951 UBE2Q2Q8WVN8 375 aa13.41□□□□□ -0.26
TCAF1-201ENST00000355951 ARAP1Q96P48 1450 aa13.41□□□□□ -0.26
TCAF1-201ENST00000355951 ANP32EQ9BTT0 268 aa13.39□□□□□ -0.27
TCAF1-201ENST00000355951 TIMELESSQ9UNS1 1208 aa13.38□□□□□ -0.27
TCAF1-201ENST00000355951 PRG4Q92954 1404 aaPredicted RBP13.38□□□□□ -0.27
TCAF1-201ENST00000355951 MIER1Q8N108 512 aa13.38□□□□□ -0.27
TCAF1-201ENST00000355951 UHRF1BP1LA0JNW5 1464 aa13.37□□□□□ -0.27
TCAF1-201ENST00000355951 PKNOX2Q96KN3 472 aa13.37□□□□□ -0.27
TCAF1-201ENST00000355951 ABCA8O94911 1581 aa13.35□□□□□ -0.27
TCAF1-201ENST00000355951 FBLN2P98095 1184 aa13.35□□□□□ -0.27
TCAF1-201ENST00000355951 JPH4Q96JJ6 628 aa13.34□□□□□ -0.27
TCAF1-201ENST00000355951 CARMIL2Q6F5E8 1435 aa13.34□□□□□ -0.27
TCAF1-201ENST00000355951 ADCY10Q96PN6 1610 aa13.32□□□□□ -0.28
TCAF1-201ENST00000355951 ARHGAP35Q9NRY4 1499 aa13.31□□□□□ -0.28
TCAF1-201ENST00000355951 CCDC136Q96JN2 1154 aa13.31□□□□□ -0.28
TCAF1-201ENST00000355951 ABCC2Q92887 1545 aa13.29□□□□□ -0.28
TCAF1-201ENST00000355951 HNRNPUL2Q1KMD3 747 aaKnown RBP13.29□□□□□ -0.28
TCAF1-201ENST00000355951 RAPGEF6Q8TEU7 1601 aa13.27□□□□□ -0.29
TCAF1-201ENST00000355951 MAPKBP1O60336 1514 aa13.26□□□□□ -0.29
TCAF1-201ENST00000355951 KDM5BQ9UGL1 1544 aa13.25□□□□□ -0.29
TCAF1-201ENST00000355951 LRRIQ1Q96JM4 1722 aa13.23□□□□□ -0.29
TCAF1-201ENST00000355951 VPS8Q8N3P4 1428 aa13.23□□□□□ -0.29
TCAF1-201ENST00000355951 ZCCHC11Q5TAX3 1644 aaKnown RBP13.22□□□□□ -0.29
TCAF1-201ENST00000355951 UACAQ9BZF9 1416 aa13.22□□□□□ -0.29
TCAF1-201ENST00000355951 UBTFP17480 764 aaKnown RBP13.21□□□□□ -0.29
TCAF1-201ENST00000355951 PTPRGP23470 1445 aa13.21□□□□□ -0.29
TCAF1-201ENST00000355951 CLIP1P30622 1438 aa13.21□□□□□ -0.29
TCAF1-201ENST00000355951 HECW1Q76N89 1606 aa13.21□□□□□ -0.3
TCAF1-201ENST00000355951 CLSPNQ9HAW4 1339 aa13.2□□□□□ -0.3
TCAF1-201ENST00000355951 BCANQ96GW7 911 aa13.2□□□□□ -0.3
TCAF1-201ENST00000355951 FMN1Q68DA7 1419 aa13.2□□□□□ -0.3
TCAF1-201ENST00000355951 TULP1O00294 542 aaPredicted RBP13.18□□□□□ -0.3
TCAF1-201ENST00000355951 FYCO1Q9BQS8 1478 aa13.18□□□□□ -0.3
TCAF1-201ENST00000355951 PCF11O94913 1555 aaKnown RBP13.17□□□□□ -0.3
TCAF1-201ENST00000355951 PDIA4P13667 645 aaKnown RBP13.17□□□□□ -0.3
TCAF1-201ENST00000355951 NUP153P49790 1475 aaKnown RBP13.17□□□□□ -0.3
TCAF1-201ENST00000355951 GLI2P10070 1586 aa13.17□□□□□ -0.3
TCAF1-201ENST00000355951 FHOD3Q2V2M9 1422 aa13.17□□□□□ -0.3
TCAF1-201ENST00000355951 CASKIN1Q8WXD9 1431 aa13.16□□□□□ -0.3
TCAF1-201ENST00000355951 CFAP43Q8NDM7 1665 aa13.16□□□□□ -0.3
TCAF1-201ENST00000355951 ARXQ96QS3 562 aa13.16□□□□□ -0.3
TCAF1-201ENST00000355951 PLB1Q6P1J6 1458 aa13.16□□□□□ -0.3
TCAF1-201ENST00000355951 MAP3K1Q13233 1512 aa13.15□□□□□ -0.3
TCAF1-201ENST00000355951 PDE4CQ08493 712 aa13.15□□□□□ -0.3
TCAF1-201ENST00000355951 SUPT16HQ9Y5B9 1047 aaKnown RBP13.15□□□□□ -0.3
TCAF1-201ENST00000355951 KIF13AQ9H1H9 1805 aa13.13□□□□□ -0.31
TCAF1-201ENST00000355951 DHX57Q6P158 1386 aaKnown RBP13.13□□□□□ -0.31
TCAF1-201ENST00000355951 SALL2Q9Y467 1007 aaPredicted RBP13.13□□□□□ -0.31
TCAF1-201ENST00000355951 CCDC18Q5T9S5 1454 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms