RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 BAZ1BQ9UIG0 1483 aaKnown RBP19.01■□□□□ 0.63
TRIM4-203ENST00000355947 FAM9BQ8IZU0 186 aa19■□□□□ 0.63
TRIM4-203ENST00000355947 MSH5O43196 834 aa19■□□□□ 0.63
TRIM4-203ENST00000355947 ARAP1Q96P48 1450 aa18.97■□□□□ 0.63
TRIM4-203ENST00000355947 TONSLQ96HA7 1378 aa18.95■□□□□ 0.62
TRIM4-203ENST00000355947 B4GALNT3Q6L9W6 998 aa18.94■□□□□ 0.62
TRIM4-203ENST00000355947 ARID3CA6NKF2 412 aa18.92■□□□□ 0.62
TRIM4-203ENST00000355947 PPP1R15AO75807 674 aaPredicted RBP18.91■□□□□ 0.62
TRIM4-203ENST00000355947 WDR97A6NE52 1622 aa18.89■□□□□ 0.62
TRIM4-203ENST00000355947 CHIC2Q9UKJ5 165 aa18.89■□□□□ 0.61
TRIM4-203ENST00000355947 SETD5Q9C0A6 1442 aa18.88■□□□□ 0.61
TRIM4-203ENST00000355947 PEG3Q9GZU2 1588 aa18.84■□□□□ 0.61
TRIM4-203ENST00000355947 RRBP1Q9P2E9 1410 aaKnown RBP18.81■□□□□ 0.6
TRIM4-203ENST00000355947 RRP7BPQ9NSQ0 103 aa18.8■□□□□ 0.6
TRIM4-203ENST00000355947 KIF27Q86VH2 1401 aa18.8■□□□□ 0.6
TRIM4-203ENST00000355947 CCER2I3L3R5 266 aa18.79■□□□□ 0.6
TRIM4-203ENST00000355947 PHLDB1Q86UU1 1377 aa18.79■□□□□ 0.6
TRIM4-203ENST00000355947 MRS2Q9HD23 443 aa18.78■□□□□ 0.6
TRIM4-203ENST00000355947 ZNF326Q5BKZ1 582 aaKnown RBP18.78■□□□□ 0.6
TRIM4-203ENST00000355947 CCDC184Q52MB2 194 aa18.78■□□□□ 0.6
TRIM4-203ENST00000355947 DEKP35659 375 aaKnown RBP18.77■□□□□ 0.6
TRIM4-203ENST00000355947 NPM2Q86SE8 214 aaKnown RBP18.76■□□□□ 0.59
TRIM4-203ENST00000355947 FOXD1Q16676 465 aa18.75■□□□□ 0.59
TRIM4-203ENST00000355947 ARHGAP35Q9NRY4 1499 aa18.73■□□□□ 0.59
TRIM4-203ENST00000355947 MAPKBP1O60336 1514 aa18.73■□□□□ 0.59
TRIM4-203ENST00000355947 SALL2Q9Y467 1007 aaPredicted RBP18.72■□□□□ 0.59
TRIM4-203ENST00000355947 HSPA5P11021 654 aaKnown RBP18.7■□□□□ 0.58
TRIM4-203ENST00000355947 RTN4Q9NQC3 1192 aaKnown RBP18.7■□□□□ 0.58
TRIM4-203ENST00000355947 PRXQ9BXM0 1461 aa18.7■□□□□ 0.58
TRIM4-203ENST00000355947 CUX2O14529 1486 aa18.68■□□□□ 0.58
TRIM4-203ENST00000355947 PPP4R2Q9NY27 417 aa18.67■□□□□ 0.58
TRIM4-203ENST00000355947 RTL5Q5HYW3 569 aaPredicted RBP18.65■□□□□ 0.58
TRIM4-203ENST00000355947 NCAPD3P42695 1498 aa18.63■□□□□ 0.57
TRIM4-203ENST00000355947 PAK3O75914 559 aaPredicted RBP18.63■□□□□ 0.57
TRIM4-203ENST00000355947 FHOD3Q2V2M9 1422 aa18.63■□□□□ 0.57
TRIM4-203ENST00000355947 CCDC136Q96JN2 1154 aa18.62■□□□□ 0.57
TRIM4-203ENST00000355947 CARMIL1Q5VZK9 1371 aa18.62■□□□□ 0.57
TRIM4-203ENST00000355947 EIF4G2P78344 907 aaKnown RBP eCLIP18.61■□□□□ 0.57
TRIM4-203ENST00000355947 MTUS2Q5JR59 1369 aa18.61■□□□□ 0.57
TRIM4-203ENST00000355947 FANCIQ9NVI1 1328 aa18.6■□□□□ 0.57
TRIM4-203ENST00000355947 NOP58Q9Y2X3 529 aaKnown RBP18.6■□□□□ 0.57
TRIM4-203ENST00000355947 WASHC2AQ641Q2 1341 aa18.58■□□□□ 0.56
TRIM4-203ENST00000355947 TOP2BQ02880 1626 aa18.58■□□□□ 0.56
TRIM4-203ENST00000355947 ANP32AP39687 249 aaKnown RBP18.57■□□□□ 0.56
TRIM4-203ENST00000355947 LRRC9Q6ZRR7 1453 aa18.55■□□□□ 0.56
TRIM4-203ENST00000355947 LAS1LQ9Y4W2 734 aaKnown RBP18.54■□□□□ 0.56
TRIM4-203ENST00000355947 ERICH3Q5RHP9 1530 aa18.54■□□□□ 0.56
TRIM4-203ENST00000355947 CUX1P39880 1505 aa18.53■□□□□ 0.56
TRIM4-203ENST00000355947 IGF1RP08069 1367 aa18.53■□□□□ 0.56
TRIM4-203ENST00000355947 TIMELESSQ9UNS1 1208 aa18.53■□□□□ 0.56
TRIM4-203ENST00000355947 ZBTB47Q9UFB7 747 aaPredicted RBP18.51■□□□□ 0.55
TRIM4-203ENST00000355947 C11orf95C9JLR9 678 aaPredicted RBP18.51■□□□□ 0.55
TRIM4-203ENST00000355947 L3MBTL2Q969R5 705 aa18.5■□□□□ 0.55
TRIM4-203ENST00000355947 HMGXB3Q12766 1538 aa18.49■□□□□ 0.55
TRIM4-203ENST00000355947 TIAM1Q13009 1591 aa18.47■□□□□ 0.55
TRIM4-203ENST00000355947 PRKRIP1Q9H875 184 aaPredicted RBP18.47■□□□□ 0.55
TRIM4-203ENST00000355947 CCDC18Q5T9S5 1454 aa18.47■□□□□ 0.55
TRIM4-203ENST00000355947 DNAJC5BQ9UF47 199 aa18.45■□□□□ 0.54
TRIM4-203ENST00000355947 CFTRP13569 1480 aa18.45■□□□□ 0.54
TRIM4-203ENST00000355947 ANO8Q9HCE9 1232 aaPredicted RBP18.44■□□□□ 0.54
TRIM4-203ENST00000355947 FHAD1B1AJZ9 1412 aa18.44■□□□□ 0.54
TRIM4-203ENST00000355947 AKNAQ7Z591 1439 aa18.42■□□□□ 0.54
TRIM4-203ENST00000355947 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.42■□□□□ 0.54
TRIM4-203ENST00000355947 TMC1Q8TDI8 760 aa18.39■□□□□ 0.54
TRIM4-203ENST00000355947 CADPSQ9ULU8 1353 aa18.39■□□□□ 0.53
TRIM4-203ENST00000355947 IL27Q8NEV9 243 aa18.38■□□□□ 0.53
TRIM4-203ENST00000355947 CC2D2AQ9P2K1 1620 aa18.37■□□□□ 0.53
TRIM4-203ENST00000355947 SLC4A1APQ9BWU0 796 aaKnown RBP18.37■□□□□ 0.53
TRIM4-203ENST00000355947 ZNF777Q9ULD5 760 aaPredicted RBP18.37■□□□□ 0.53
TRIM4-203ENST00000355947 MPHOSPH9Q99550 1183 aa18.36■□□□□ 0.53
TRIM4-203ENST00000355947 KDM2AQ9Y2K7 1162 aa18.36■□□□□ 0.53
TRIM4-203ENST00000355947 AQRO60306 1485 aaKnown RBP eCLIP18.36■□□□□ 0.539e-7■■■■□ 26.7
TRIM4-203ENST00000355947 PTPRKQ15262 1439 aa18.35■□□□□ 0.53
TRIM4-203ENST00000355947 FGD6Q6ZV73 1430 aa18.35■□□□□ 0.53
TRIM4-203ENST00000355947 SKAP1Q86WV1 359 aa18.34■□□□□ 0.53
TRIM4-203ENST00000355947 NEFMP07197 916 aa18.33■□□□□ 0.53
TRIM4-203ENST00000355947 NBPF8Q3BBV2 869 aa18.33■□□□□ 0.53
TRIM4-203ENST00000355947 IPO9Q96P70 1041 aaKnown RBP18.32■□□□□ 0.52
TRIM4-203ENST00000355947 PCF11O94913 1555 aaKnown RBP18.32■□□□□ 0.52
TRIM4-203ENST00000355947 ZBED9Q6R2W3 1325 aa18.32■□□□□ 0.52
TRIM4-203ENST00000355947 MYT1LQ9UL68 1186 aa18.32■□□□□ 0.52
TRIM4-203ENST00000355947 NESP48681 1621 aa18.31■□□□□ 0.52
TRIM4-203ENST00000355947 BIVM-ERCC5R4GMW8 1640 aa18.31■□□□□ 0.52
TRIM4-203ENST00000355947 UACAQ9BZF9 1416 aa18.3■□□□□ 0.52
TRIM4-203ENST00000355947 KIF7Q2M1P5 1343 aa18.3■□□□□ 0.52
TRIM4-203ENST00000355947 FGD5Q6ZNL6 1462 aa18.29■□□□□ 0.52
TRIM4-203ENST00000355947 EIF5BO60841 1220 aaKnown RBP18.28■□□□□ 0.52
TRIM4-203ENST00000355947 RAD54L2Q9Y4B4 1467 aa18.28■□□□□ 0.52
TRIM4-203ENST00000355947 CCDC7Q96M83 1385 aa18.28■□□□□ 0.52
TRIM4-203ENST00000355947 FMN1Q68DA7 1419 aa18.27■□□□□ 0.52
TRIM4-203ENST00000355947 CNTLNQ9NXG0 1405 aa18.27■□□□□ 0.52
TRIM4-203ENST00000355947 PRKCSHP14314 528 aaPredicted RBP18.27■□□□□ 0.52
TRIM4-203ENST00000355947 ERICH6BQ5W0A0 696 aa18.27■□□□□ 0.51
TRIM4-203ENST00000355947 SLC4A3P48751 1232 aa18.26■□□□□ 0.51
TRIM4-203ENST00000355947 NUDCQ9Y266 331 aa18.26■□□□□ 0.51
TRIM4-203ENST00000355947 EXOC6Q8TAG9 804 aa18.26■□□□□ 0.51
TRIM4-203ENST00000355947 DAXXQ9UER7 740 aaPredicted RBP18.25■□□□□ 0.51
TRIM4-203ENST00000355947 TDRD9Q8NDG6 1382 aaKnown RBP18.24■□□□□ 0.51
TRIM4-203ENST00000355947 NAIPQ13075 1403 aa18.24■□□□□ 0.51
TRIM4-203ENST00000355947 PLIN1O60240 522 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms