RNA–Protein interactions for RNA: ENST00000355648.8

PHACTR3-201, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-201ENST00000355648 KDM2AQ9Y2K7 1162 aa15.26■□□□□ 0.03
PHACTR3-201ENST00000355648 KLHL34Q8N239 644 aa15.24■□□□□ 0.03
PHACTR3-201ENST00000355648 TMEM132AQ24JP5 1023 aa15.2■□□□□ 0.02
PHACTR3-201ENST00000355648 FOXD4L1Q9NU39 408 aa15.19■□□□□ 0.02
PHACTR3-201ENST00000355648 PEG3Q9GZU2 1588 aa15.19■□□□□ 0.02
PHACTR3-201ENST00000355648 TOP2AP11388 1531 aaKnown RBP15.19■□□□□ 0.02
PHACTR3-201ENST00000355648 ZMYND15Q9H091 742 aa15.19■□□□□ 0.02
PHACTR3-201ENST00000355648 ATAD2BQ9ULI0 1458 aa15.15■□□□□ 0.02
PHACTR3-201ENST00000355648 RSPH6AQ9H0K4 717 aa15.15■□□□□ 0.02
PHACTR3-201ENST00000355648 EIF4G1Q04637 1599 aaKnown RBP15.15■□□□□ 0.02
PHACTR3-201ENST00000355648 C11orf95C9JLR9 678 aaPredicted RBP15.13■□□□□ 0.01
PHACTR3-201ENST00000355648 FBLN2P98095 1184 aa15.12■□□□□ 0.01
PHACTR3-201ENST00000355648 PDE4CQ08493 712 aa15.12■□□□□ 0.01
PHACTR3-201ENST00000355648 RTL5Q5HYW3 569 aaPredicted RBP15.12■□□□□ 0.01
PHACTR3-201ENST00000355648 SMARCA2P51531 1590 aa15.11■□□□□ 0.01
PHACTR3-201ENST00000355648 CDK11AQ9UQ88 783 aaPredicted RBP15.11■□□□□ 0.01
PHACTR3-201ENST00000355648 FGD1P98174 961 aa15.09■□□□□ 0.01
PHACTR3-201ENST00000355648 CCDC88BA6NC98 1476 aa15.08■□□□□ 0.01
PHACTR3-201ENST00000355648 NOP58Q9Y2X3 529 aaKnown RBP15.08■□□□□ 0
PHACTR3-201ENST00000355648 PDIA4P13667 645 aaKnown RBP15.07■□□□□ 0
PHACTR3-201ENST00000355648 NBR1Q14596 966 aa15.06■□□□□ 0
PHACTR3-201ENST00000355648 BAZ1BQ9UIG0 1483 aaKnown RBP15.05■□□□□ 0
PHACTR3-201ENST00000355648 C14orf37Q86TY3 774 aa15.03■□□□□ -0
PHACTR3-201ENST00000355648 NCAPD3P42695 1498 aa15.01□□□□□ -0.01
PHACTR3-201ENST00000355648 ITGAEP38570 1179 aa14.99□□□□□ -0.01
PHACTR3-201ENST00000355648 AAMPQ13685 434 aa14.98□□□□□ -0.01
PHACTR3-201ENST00000355648 HMGXB3Q12766 1538 aa14.95□□□□□ -0.02
PHACTR3-201ENST00000355648 WASHC2AQ641Q2 1341 aa14.95□□□□□ -0.02
PHACTR3-201ENST00000355648 WASHC2CQ9Y4E1 1318 aa14.95□□□□□ -0.02
PHACTR3-201ENST00000355648 RBM10P98175 930 aaKnown RBP14.93□□□□□ -0.02
PHACTR3-201ENST00000355648 CC2D2AQ9P2K1 1620 aa14.92□□□□□ -0.02
PHACTR3-201ENST00000355648 USP35Q9P2H5 1018 aa14.92□□□□□ -0.02
PHACTR3-201ENST00000355648 NPM2Q86SE8 214 aaKnown RBP14.9□□□□□ -0.02
PHACTR3-201ENST00000355648 A0A0U1RQG5 324 aaPredicted RBP14.9□□□□□ -0.02
PHACTR3-201ENST00000355648 PAK3O75914 559 aaPredicted RBP14.85□□□□□ -0.03
PHACTR3-201ENST00000355648 TAF7LQ5H9L4 462 aa14.84□□□□□ -0.03
PHACTR3-201ENST00000355648 FAM43AQ8N2R8 423 aa14.82□□□□□ -0.04
PHACTR3-201ENST00000355648 BCL11BQ9C0K0 894 aaPredicted RBP14.82□□□□□ -0.04
PHACTR3-201ENST00000355648 RRP9O43818 475 aaKnown RBP14.81□□□□□ -0.04
PHACTR3-201ENST00000355648 IPO9Q96P70 1041 aaKnown RBP14.78□□□□□ -0.04
PHACTR3-201ENST00000355648 ABCC8Q09428 1581 aa14.77□□□□□ -0.04
PHACTR3-201ENST00000355648 ZBTB47Q9UFB7 747 aaPredicted RBP14.77□□□□□ -0.05
PHACTR3-201ENST00000355648 HSP90AA2PQ14568 343 aaPredicted RBP14.76□□□□□ -0.05
PHACTR3-201ENST00000355648 BRPF3Q9ULD4 1205 aa14.76□□□□□ -0.05
PHACTR3-201ENST00000355648 ANP32AP39687 249 aaKnown RBP14.75□□□□□ -0.05
PHACTR3-201ENST00000355648 NEFMP07197 916 aa14.73□□□□□ -0.05
PHACTR3-201ENST00000355648 WRNQ14191 1432 aaPredicted RBP eCLIP14.7□□□□□ -0.06
PHACTR3-201ENST00000355648 CFTRP13569 1480 aa14.69□□□□□ -0.06
PHACTR3-201ENST00000355648 PPP4R2Q9NY27 417 aa14.68□□□□□ -0.06
PHACTR3-201ENST00000355648 GSE1Q14687 1217 aa14.66□□□□□ -0.06
PHACTR3-201ENST00000355648 FBXO3Q9UK99 471 aa14.66□□□□□ -0.06
PHACTR3-201ENST00000355648 UBTFP17480 764 aaKnown RBP14.65□□□□□ -0.06
PHACTR3-201ENST00000355648 KCNH8Q96L42 1107 aa14.65□□□□□ -0.06
PHACTR3-201ENST00000355648 PPM1GO15355 546 aaPredicted RBP14.65□□□□□ -0.06
PHACTR3-201ENST00000355648 DNAJC5BQ9UF47 199 aa14.65□□□□□ -0.06
PHACTR3-201ENST00000355648 CADPSQ9ULU8 1353 aa14.64□□□□□ -0.07
PHACTR3-201ENST00000355648 ZNF326Q5BKZ1 582 aaKnown RBP14.64□□□□□ -0.07
PHACTR3-201ENST00000355648 HSP90AA1P07900 732 aaKnown RBP14.62□□□□□ -0.07
PHACTR3-201ENST00000355648 PAXIP1Q6ZW49 1069 aaPredicted RBP14.61□□□□□ -0.07
PHACTR3-201ENST00000355648 SYNJ1O43426 1573 aa14.59□□□□□ -0.07
PHACTR3-201ENST00000355648 CALD1Q05682 793 aaKnown RBP14.58□□□□□ -0.07
PHACTR3-201ENST00000355648 CCER2I3L3R5 266 aa14.58□□□□□ -0.08
PHACTR3-201ENST00000355648 CENPJQ9HC77 1338 aaPredicted RBP14.57□□□□□ -0.08
PHACTR3-201ENST00000355648 CFAP44Q96MT7 982 aa14.57□□□□□ -0.08
PHACTR3-201ENST00000355648 PRDM2Q13029 1718 aa14.56□□□□□ -0.08
PHACTR3-201ENST00000355648 RSPH4AQ5TD94 716 aa14.54□□□□□ -0.08
PHACTR3-201ENST00000355648 PRDM4Q9UKN5 801 aa14.54□□□□□ -0.08
PHACTR3-201ENST00000355648 SOGA1O94964 1423 aa14.53□□□□□ -0.08
PHACTR3-201ENST00000355648 NESP48681 1621 aa14.52□□□□□ -0.08
PHACTR3-201ENST00000355648 TOP2BQ02880 1626 aa14.52□□□□□ -0.09
PHACTR3-201ENST00000355648 EEA1Q15075 1411 aa14.5□□□□□ -0.09
PHACTR3-201ENST00000355648 PKD2Q13563 968 aa14.5□□□□□ -0.09
PHACTR3-201ENST00000355648 NAP1L2Q9ULW6 460 aaPredicted RBP14.5□□□□□ -0.09
PHACTR3-201ENST00000355648 CUX1P39880 1505 aa14.49□□□□□ -0.09
PHACTR3-201ENST00000355648 TRIM52Q96A61 297 aa14.49□□□□□ -0.09
PHACTR3-201ENST00000355648 BIVM-ERCC5R4GMW8 1640 aa14.49□□□□□ -0.09
PHACTR3-201ENST00000355648 RUSC2Q8N2Y8 1516 aa14.48□□□□□ -0.09
PHACTR3-201ENST00000355648 NPM1P06748 294 aaKnown RBP eCLIP14.47□□□□□ -0.09
PHACTR3-201ENST00000355648 BBXQ8WY36 941 aaPredicted RBP14.47□□□□□ -0.09
PHACTR3-201ENST00000355648 FANCD2Q9BXW9 1451 aa14.47□□□□□ -0.09
PHACTR3-201ENST00000355648 LAMC3Q9Y6N6 1575 aa14.46□□□□□ -0.09
PHACTR3-201ENST00000355648 NAP1L5Q96NT1 182 aaPredicted RBP14.45□□□□□ -0.1
PHACTR3-201ENST00000355648 PDCL3Q9H2J4 239 aa14.45□□□□□ -0.1
PHACTR3-201ENST00000355648 CNKSR2Q8WXI2 1034 aa14.44□□□□□ -0.1
PHACTR3-201ENST00000355648 FRAT1Q92837 279 aaPredicted RBP14.44□□□□□ -0.1
PHACTR3-201ENST00000355648 IPO4Q8TEX9 1081 aaKnown RBP14.43□□□□□ -0.1
PHACTR3-201ENST00000355648 LAS1LQ9Y4W2 734 aaKnown RBP14.42□□□□□ -0.1
PHACTR3-201ENST00000355648 FOXD1Q16676 465 aa14.42□□□□□ -0.1
PHACTR3-201ENST00000355648 NCLP19338 710 aaKnown RBP14.41□□□□□ -0.1
PHACTR3-201ENST00000355648 BRD2P25440 801 aaKnown RBP14.41□□□□□ -0.1
PHACTR3-201ENST00000355648 IRX6P78412 446 aaPredicted RBP14.41□□□□□ -0.1
PHACTR3-201ENST00000355648 PNNQ9H307 717 aaKnown RBP14.41□□□□□ -0.1
PHACTR3-201ENST00000355648 CANXP27824 592 aaKnown RBP14.39□□□□□ -0.11
PHACTR3-201ENST00000355648 PDS5BQ9NTI5 1447 aa14.38□□□□□ -0.11
PHACTR3-201ENST00000355648 RGS3P49796 1198 aa14.38□□□□□ -0.11
PHACTR3-201ENST00000355648 B4GALNT3Q6L9W6 998 aa14.38□□□□□ -0.11
PHACTR3-201ENST00000355648 RRAGDQ9NQL2 400 aaPredicted RBP14.38□□□□□ -0.11
PHACTR3-201ENST00000355648 GTF2E1P29083 439 aaPredicted RBP14.37□□□□□ -0.11
PHACTR3-201ENST00000355648 CNGB1Q14028 1251 aaPredicted RBP14.36□□□□□ -0.11
PHACTR3-201ENST00000355648 CEP164Q9UPV0 1460 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms