RNA–Protein interactions for RNA: ENST00000355192.7

MSRB3-202, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 1 (best) BASIC

Gene MSRB3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-202ENST00000355192 NBR1Q14596 966 aa18.96■□□□□ 0.63
MSRB3-202ENST00000355192 RRP7BPQ9NSQ0 103 aa18.95■□□□□ 0.62
MSRB3-202ENST00000355192 SALL2Q9Y467 1007 aaPredicted RBP18.93■□□□□ 0.62
MSRB3-202ENST00000355192 TMC1Q8TDI8 760 aa18.92■□□□□ 0.62
MSRB3-202ENST00000355192 RUSC2Q8N2Y8 1516 aa18.88■□□□□ 0.61
MSRB3-202ENST00000355192 ZBTB47Q9UFB7 747 aaPredicted RBP18.88■□□□□ 0.61
MSRB3-202ENST00000355192 TOP2AP11388 1531 aaKnown RBP18.87■□□□□ 0.61
MSRB3-202ENST00000355192 TSHZ2Q9NRE2 1034 aa18.86■□□□□ 0.61
MSRB3-202ENST00000355192 TIMELESSQ9UNS1 1208 aa18.81■□□□□ 0.6
MSRB3-202ENST00000355192 RBM19Q9Y4C8 960 aaKnown RBP18.81■□□□□ 0.6
MSRB3-202ENST00000355192 CCER2I3L3R5 266 aa18.8■□□□□ 0.6
MSRB3-202ENST00000355192 CANXP27824 592 aaKnown RBP18.8■□□□□ 0.6
MSRB3-202ENST00000355192 RAB3GAP2Q9H2M9 1393 aa18.8■□□□□ 0.6
MSRB3-202ENST00000355192 SETD5Q9C0A6 1442 aa18.8■□□□□ 0.6
MSRB3-202ENST00000355192 SENP3-EIF4A1A0A087X0R7 540 aa18.79■□□□□ 0.6
MSRB3-202ENST00000355192 DHX57Q6P158 1386 aaKnown RBP18.78■□□□□ 0.6
MSRB3-202ENST00000355192 RAPGEF2Q9Y4G8 1499 aa18.77■□□□□ 0.59
MSRB3-202ENST00000355192 PPP4R2Q9NY27 417 aa18.77■□□□□ 0.59
MSRB3-202ENST00000355192 KDM2AQ9Y2K7 1162 aa18.76■□□□□ 0.59
MSRB3-202ENST00000355192 FHAD1B1AJZ9 1412 aa18.73■□□□□ 0.59
MSRB3-202ENST00000355192 KCNH8Q96L42 1107 aa18.73■□□□□ 0.59
MSRB3-202ENST00000355192 CARMIL1Q5VZK9 1371 aa18.72■□□□□ 0.59
MSRB3-202ENST00000355192 B4GALNT3Q6L9W6 998 aa18.71■□□□□ 0.59
MSRB3-202ENST00000355192 CUX2O14529 1486 aa18.71■□□□□ 0.59
MSRB3-202ENST00000355192 PPP1R15AO75807 674 aaPredicted RBP18.66■□□□□ 0.58
MSRB3-202ENST00000355192 BCL11AQ9H165 835 aa18.65■□□□□ 0.58
MSRB3-202ENST00000355192 TSPY4P0CV99 314 aa18.64■□□□□ 0.58
MSRB3-202ENST00000355192 TSPY10P0CW01 314 aa18.64■□□□□ 0.58
MSRB3-202ENST00000355192 EIF5BO60841 1220 aaKnown RBP18.62■□□□□ 0.57
MSRB3-202ENST00000355192 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.62■□□□□ 0.57
MSRB3-202ENST00000355192 SMARCA4P51532 1647 aa18.62■□□□□ 0.57
MSRB3-202ENST00000355192 HSPA5P11021 654 aaKnown RBP18.61■□□□□ 0.57
MSRB3-202ENST00000355192 ARHGAP35Q9NRY4 1499 aa18.59■□□□□ 0.57
MSRB3-202ENST00000355192 NOP58Q9Y2X3 529 aaKnown RBP18.58■□□□□ 0.57
MSRB3-202ENST00000355192 WDR43Q15061 677 aaKnown RBP eCLIP18.57■□□□□ 0.56
MSRB3-202ENST00000355192 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.56■□□□□ 0.56
MSRB3-202ENST00000355192 SMARCA2P51531 1590 aa18.56■□□□□ 0.56
MSRB3-202ENST00000355192 CARD11Q9BXL7 1154 aa18.54■□□□□ 0.56
MSRB3-202ENST00000355192 CFDP1Q9UEE9 299 aaPredicted RBP18.52■□□□□ 0.55
MSRB3-202ENST00000355192 UPF2Q9HAU5 1272 aaKnown RBP18.51■□□□□ 0.55
MSRB3-202ENST00000355192 RGL3Q3MIN7 710 aa18.5■□□□□ 0.55
MSRB3-202ENST00000355192 FOXD1Q16676 465 aa18.49■□□□□ 0.55
MSRB3-202ENST00000355192 ERICH6BQ5W0A0 696 aa18.49■□□□□ 0.55
MSRB3-202ENST00000355192 LAS1LQ9Y4W2 734 aaKnown RBP18.46■□□□□ 0.55
MSRB3-202ENST00000355192 ATAD2BQ9ULI0 1458 aa18.46■□□□□ 0.55
MSRB3-202ENST00000355192 DEKP35659 375 aaKnown RBP18.46■□□□□ 0.55
MSRB3-202ENST00000355192 DDRGK1Q96HY6 314 aa18.46■□□□□ 0.55
MSRB3-202ENST00000355192 CHMP7Q8WUX9 453 aaPredicted RBP18.44■□□□□ 0.54
MSRB3-202ENST00000355192 CHGAP10645 457 aaKnown RBP18.43■□□□□ 0.54
MSRB3-202ENST00000355192 NEFMP07197 916 aa18.43■□□□□ 0.54
MSRB3-202ENST00000355192 KIF21BO75037 1637 aa18.43■□□□□ 0.54
MSRB3-202ENST00000355192 PLEKHD1A6NEE1 506 aa18.42■□□□□ 0.54
MSRB3-202ENST00000355192 ARXQ96QS3 562 aa18.41■□□□□ 0.54
MSRB3-202ENST00000355192 FHOD3Q2V2M9 1422 aa18.41■□□□□ 0.54
MSRB3-202ENST00000355192 MPHOSPH9Q99550 1183 aa18.41■□□□□ 0.54
MSRB3-202ENST00000355192 PPM1GO15355 546 aaPredicted RBP18.4■□□□□ 0.54
MSRB3-202ENST00000355192 L3MBTL2Q969R5 705 aa18.39■□□□□ 0.53
MSRB3-202ENST00000355192 FMN1Q68DA7 1419 aa18.38■□□□□ 0.53
MSRB3-202ENST00000355192 HSP90AA1P07900 732 aaKnown RBP18.37■□□□□ 0.53
MSRB3-202ENST00000355192 RTN4Q9NQC3 1192 aaKnown RBP18.36■□□□□ 0.53
MSRB3-202ENST00000355192 EIF4G1Q04637 1599 aaKnown RBP18.34■□□□□ 0.53
MSRB3-202ENST00000355192 CC2D1BQ5T0F9 858 aaKnown RBP18.33■□□□□ 0.52
MSRB3-202ENST00000355192 DCAF11Q8TEB1 546 aa18.33■□□□□ 0.52
MSRB3-202ENST00000355192 KNSTRNQ9Y448 316 aa18.32■□□□□ 0.52
MSRB3-202ENST00000355192 RGS3P49796 1198 aa18.31■□□□□ 0.52
MSRB3-202ENST00000355192 PKD2Q13563 968 aa18.29■□□□□ 0.52
MSRB3-202ENST00000355192 NUDCQ9Y266 331 aa18.29■□□□□ 0.52
MSRB3-202ENST00000355192 TDRD9Q8NDG6 1382 aaKnown RBP18.28■□□□□ 0.52
MSRB3-202ENST00000355192 BECN1Q14457 450 aa18.28■□□□□ 0.52
MSRB3-202ENST00000355192 PRKRIP1Q9H875 184 aaPredicted RBP18.27■□□□□ 0.51
MSRB3-202ENST00000355192 ANP32BQ92688 251 aaKnown RBP18.26■□□□□ 0.51
MSRB3-202ENST00000355192 PHLDB1Q86UU1 1377 aa18.26■□□□□ 0.51
MSRB3-202ENST00000355192 ARAP1Q96P48 1450 aa18.26■□□□□ 0.51
MSRB3-202ENST00000355192 SYNJ1O43426 1573 aa18.26■□□□□ 0.51
MSRB3-202ENST00000355192 RRBP1Q9P2E9 1410 aaKnown RBP18.24■□□□□ 0.51
MSRB3-202ENST00000355192 RCAN3Q9UKA8 241 aa18.24■□□□□ 0.51
MSRB3-202ENST00000355192 CCDC18Q5T9S5 1454 aa18.24■□□□□ 0.51
MSRB3-202ENST00000355192 CADPSQ9ULU8 1353 aa18.23■□□□□ 0.51
MSRB3-202ENST00000355192 CDCA8Q53HL2 280 aa18.23■□□□□ 0.51
MSRB3-202ENST00000355192 IGF1RP08069 1367 aa18.23■□□□□ 0.51
MSRB3-202ENST00000355192 FANCIQ9NVI1 1328 aa18.23■□□□□ 0.51
MSRB3-202ENST00000355192 IPO9Q96P70 1041 aaKnown RBP18.22■□□□□ 0.51
MSRB3-202ENST00000355192 ZBED9Q6R2W3 1325 aa18.19■□□□□ 0.5
MSRB3-202ENST00000355192 TCERG1O14776 1098 aaKnown RBP18.19■□□□□ 0.5
MSRB3-202ENST00000355192 NEUROD2Q15784 382 aa18.19■□□□□ 0.5
MSRB3-202ENST00000355192 SLC24A1O60721 1099 aa18.18■□□□□ 0.5
MSRB3-202ENST00000355192 TMF1P82094 1093 aa18.17■□□□□ 0.5
MSRB3-202ENST00000355192 LRRC9Q6ZRR7 1453 aa18.17■□□□□ 0.5
MSRB3-202ENST00000355192 KTN1Q86UP2 1357 aaKnown RBP18.16■□□□□ 0.5
MSRB3-202ENST00000355192 RALBP1Q15311 655 aa18.16■□□□□ 0.5
MSRB3-202ENST00000355192 FRAT1Q92837 279 aaPredicted RBP18.15■□□□□ 0.5
MSRB3-202ENST00000355192 ERICH3Q5RHP9 1530 aa18.14■□□□□ 0.49
MSRB3-202ENST00000355192 NUP155O75694 1391 aa18.13■□□□□ 0.49
MSRB3-202ENST00000355192 GLIPR1L2Q4G1C9 344 aa18.12■□□□□ 0.49
MSRB3-202ENST00000355192 FGD6Q6ZV73 1430 aa18.12■□□□□ 0.49
MSRB3-202ENST00000355192 PRXQ9BXM0 1461 aa18.11■□□□□ 0.49
MSRB3-202ENST00000355192 UACAQ9BZF9 1416 aa18.1■□□□□ 0.49
MSRB3-202ENST00000355192 ROCK2O75116 1388 aaKnown RBP18.09■□□□□ 0.49
MSRB3-202ENST00000355192 WASHC2AQ641Q2 1341 aa18.09■□□□□ 0.49
MSRB3-202ENST00000355192 NLRP13Q86W25 1043 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms