RNA–Protein interactions for RNA: ENST00000354955.4

FMOD-201, Transcript of fibromodulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FMOD, Length 3,310 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMOD-201ENST00000354955 BAZ1AQ9NRL2 1556 aaPredicted RBP12.01□□□□□ -0.49
FMOD-201ENST00000354955 CCDC184Q52MB2 194 aa12.01□□□□□ -0.49
FMOD-201ENST00000354955 NACADO15069 1562 aa11.99□□□□□ -0.49
FMOD-201ENST00000354955 TONSLQ96HA7 1378 aa11.99□□□□□ -0.49
FMOD-201ENST00000354955 SMARCA2P51531 1590 aa11.97□□□□□ -0.49
FMOD-201ENST00000354955 MRS2Q9HD23 443 aa11.96□□□□□ -0.49
FMOD-201ENST00000354955 EEA1Q15075 1411 aa11.96□□□□□ -0.49
FMOD-201ENST00000354955 CLSPNQ9HAW4 1339 aa11.96□□□□□ -0.5
FMOD-201ENST00000354955 DEKP35659 375 aaKnown RBP11.96□□□□□ -0.5
FMOD-201ENST00000354955 CCDC136Q96JN2 1154 aa11.94□□□□□ -0.5
FMOD-201ENST00000354955 KIF21BO75037 1637 aa11.94□□□□□ -0.5
FMOD-201ENST00000354955 PPP1R15AO75807 674 aaPredicted RBP11.94□□□□□ -0.5
FMOD-201ENST00000354955 TOP2AP11388 1531 aaKnown RBP11.93□□□□□ -0.5
FMOD-201ENST00000354955 SYNJ1O43426 1573 aa11.92□□□□□ -0.5
FMOD-201ENST00000354955 PAK3O75914 559 aaPredicted RBP11.91□□□□□ -0.5
FMOD-201ENST00000354955 ARAP1Q96P48 1450 aa11.9□□□□□ -0.5
FMOD-201ENST00000354955 LAS1LQ9Y4W2 734 aaKnown RBP11.9□□□□□ -0.5
FMOD-201ENST00000354955 WDR97A6NE52 1622 aa11.89□□□□□ -0.51
FMOD-201ENST00000354955 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.89□□□□□ -0.51
FMOD-201ENST00000354955 HSPA5P11021 654 aaKnown RBP11.87□□□□□ -0.51
FMOD-201ENST00000354955 RTL5Q5HYW3 569 aaPredicted RBP11.87□□□□□ -0.51
FMOD-201ENST00000354955 ANO8Q9HCE9 1232 aaPredicted RBP11.85□□□□□ -0.51
FMOD-201ENST00000354955 SMARCA4P51532 1647 aa11.85□□□□□ -0.51
FMOD-201ENST00000354955 SETD5Q9C0A6 1442 aa11.85□□□□□ -0.51
FMOD-201ENST00000354955 PHLDB1Q86UU1 1377 aa11.85□□□□□ -0.51
FMOD-201ENST00000354955 UNC13AQ9UPW8 1703 aa11.84□□□□□ -0.51
FMOD-201ENST00000354955 SKAP1Q86WV1 359 aa11.84□□□□□ -0.51
FMOD-201ENST00000354955 EIF4G1Q04637 1599 aaKnown RBP11.81□□□□□ -0.52
FMOD-201ENST00000354955 ARXQ96QS3 562 aa11.8□□□□□ -0.52
FMOD-201ENST00000354955 KDM2AQ9Y2K7 1162 aa11.8□□□□□ -0.52
FMOD-201ENST00000354955 C11orf95C9JLR9 678 aaPredicted RBP11.8□□□□□ -0.52
FMOD-201ENST00000354955 PPP4R2Q9NY27 417 aa11.8□□□□□ -0.52
FMOD-201ENST00000354955 ZNF777Q9ULD5 760 aaPredicted RBP11.8□□□□□ -0.52
FMOD-201ENST00000354955 EIF5BO60841 1220 aaKnown RBP11.8□□□□□ -0.52
FMOD-201ENST00000354955 NOP58Q9Y2X3 529 aaKnown RBP11.8□□□□□ -0.52
FMOD-201ENST00000354955 CCER2I3L3R5 266 aa11.79□□□□□ -0.52
FMOD-201ENST00000354955 EIF4G2P78344 907 aaKnown RBP eCLIP11.78□□□□□ -0.52
FMOD-201ENST00000354955 ZBTB47Q9UFB7 747 aaPredicted RBP11.78□□□□□ -0.52
FMOD-201ENST00000354955 WASHC2AQ641Q2 1341 aa11.78□□□□□ -0.52
FMOD-201ENST00000354955 ANP32AP39687 249 aaKnown RBP11.78□□□□□ -0.52
FMOD-201ENST00000354955 IL27Q8NEV9 243 aa11.78□□□□□ -0.52
FMOD-201ENST00000354955 SLC4A3P48751 1232 aa11.76□□□□□ -0.53
FMOD-201ENST00000354955 L3MBTL2Q969R5 705 aa11.75□□□□□ -0.53
FMOD-201ENST00000354955 MTUS2Q5JR59 1369 aa11.75□□□□□ -0.53
FMOD-201ENST00000354955 FHOD3Q2V2M9 1422 aa11.75□□□□□ -0.53
FMOD-201ENST00000354955 KIF27Q86VH2 1401 aa11.75□□□□□ -0.53
FMOD-201ENST00000354955 CUX2O14529 1486 aa11.73□□□□□ -0.53
FMOD-201ENST00000354955 BICRAQ9NZM4 1560 aa11.73□□□□□ -0.53
FMOD-201ENST00000354955 TMC1Q8TDI8 760 aa11.72□□□□□ -0.53
FMOD-201ENST00000354955 ARHGAP35Q9NRY4 1499 aa11.72□□□□□ -0.53
FMOD-201ENST00000354955 MAPKBP1O60336 1514 aa11.71□□□□□ -0.53
FMOD-201ENST00000354955 PLIN1O60240 522 aa11.71□□□□□ -0.54
FMOD-201ENST00000354955 NEFMP07197 916 aa11.7□□□□□ -0.54
FMOD-201ENST00000354955 AKNAQ7Z591 1439 aa11.7□□□□□ -0.54
FMOD-201ENST00000354955 RRBP1Q9P2E9 1410 aaKnown RBP11.7□□□□□ -0.54
FMOD-201ENST00000354955 CARMIL1Q5VZK9 1371 aa11.7□□□□□ -0.54
FMOD-201ENST00000354955 PRKRIP1Q9H875 184 aaPredicted RBP11.7□□□□□ -0.54
FMOD-201ENST00000354955 SLC4A1APQ9BWU0 796 aaKnown RBP11.69□□□□□ -0.54
FMOD-201ENST00000354955 FANCIQ9NVI1 1328 aa11.68□□□□□ -0.54
FMOD-201ENST00000354955 ATAD2BQ9ULI0 1458 aa11.67□□□□□ -0.54
FMOD-201ENST00000354955 DAXXQ9UER7 740 aaPredicted RBP11.65□□□□□ -0.54
FMOD-201ENST00000354955 RGL3Q3MIN7 710 aa11.65□□□□□ -0.55
FMOD-201ENST00000354955 SENP3Q9H4L4 574 aaPredicted RBP11.65□□□□□ -0.55
FMOD-201ENST00000354955 NBPF8Q3BBV2 869 aa11.64□□□□□ -0.55
FMOD-201ENST00000354955 EXOC6Q8TAG9 804 aa11.64□□□□□ -0.55
FMOD-201ENST00000354955 MPHOSPH9Q99550 1183 aa11.64□□□□□ -0.55
FMOD-201ENST00000354955 IGF1RP08069 1367 aa11.63□□□□□ -0.55
FMOD-201ENST00000354955 FBLN2P98095 1184 aa11.62□□□□□ -0.55
FMOD-201ENST00000354955 PRXQ9BXM0 1461 aa11.62□□□□□ -0.55
FMOD-201ENST00000354955 ZNF644Q9H582 1327 aaPredicted RBP11.62□□□□□ -0.55
FMOD-201ENST00000354955 CC2D1BQ5T0F9 858 aaKnown RBP11.61□□□□□ -0.55
FMOD-201ENST00000354955 IPO9Q96P70 1041 aaKnown RBP11.6□□□□□ -0.55
FMOD-201ENST00000354955 RGS3P49796 1198 aa11.6□□□□□ -0.55
FMOD-201ENST00000354955 LRRC9Q6ZRR7 1453 aa11.59□□□□□ -0.55
FMOD-201ENST00000354955 DNAJC5BQ9UF47 199 aa11.59□□□□□ -0.55
FMOD-201ENST00000354955 CDCA7LQ96GN5 454 aa11.58□□□□□ -0.55
FMOD-201ENST00000354955 AQRO60306 1485 aaKnown RBP eCLIP11.58□□□□□ -0.56
FMOD-201ENST00000354955 BRPF3Q9ULD4 1205 aa11.58□□□□□ -0.56
FMOD-201ENST00000354955 KIF7Q2M1P5 1343 aa11.58□□□□□ -0.56
FMOD-201ENST00000354955 TDRD9Q8NDG6 1382 aaKnown RBP11.58□□□□□ -0.56
FMOD-201ENST00000354955 CCDC18Q5T9S5 1454 aa11.57□□□□□ -0.56
FMOD-201ENST00000354955 PTPRKQ15262 1439 aa11.57□□□□□ -0.56
FMOD-201ENST00000354955 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.57□□□□□ -0.56
FMOD-201ENST00000354955 CARD11Q9BXL7 1154 aa11.54□□□□□ -0.56
FMOD-201ENST00000354955 CUX1P39880 1505 aa11.54□□□□□ -0.56
FMOD-201ENST00000354955 TIMELESSQ9UNS1 1208 aa11.54□□□□□ -0.56
FMOD-201ENST00000354955 SPRYD3Q8NCJ5 442 aa11.53□□□□□ -0.56
FMOD-201ENST00000354955 NUDCQ9Y266 331 aa11.53□□□□□ -0.56
FMOD-201ENST00000354955 RAD54L2Q9Y4B4 1467 aa11.53□□□□□ -0.56
FMOD-201ENST00000354955 ZBED9Q6R2W3 1325 aa11.53□□□□□ -0.56
FMOD-201ENST00000354955 PDE4AP27815 886 aa11.52□□□□□ -0.57
FMOD-201ENST00000354955 DCAF11Q8TEB1 546 aa11.51□□□□□ -0.57
FMOD-201ENST00000354955 ST20-MTHFSA0A0A6YYL1 179 aa11.5□□□□□ -0.57
FMOD-201ENST00000354955 CCDC7Q96M83 1385 aa11.5□□□□□ -0.57
FMOD-201ENST00000354955 ARID4BQ4LE39 1312 aaPredicted RBP11.5□□□□□ -0.57
FMOD-201ENST00000354955 PKD2Q13563 968 aa11.49□□□□□ -0.57
FMOD-201ENST00000354955 RCAN3Q9UKA8 241 aa11.49□□□□□ -0.57
FMOD-201ENST00000354955 FHAD1B1AJZ9 1412 aa11.48□□□□□ -0.57
FMOD-201ENST00000354955 FGD6Q6ZV73 1430 aa11.48□□□□□ -0.57
FMOD-201ENST00000354955 NEUROD2Q15784 382 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms